Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RPL23AP94-201ENST00000512518 302 ntBASIC1.24□□□□□ -2.21
HIST1H1AQ02539 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.24□□□□□ -2.21
HIST1H1AQ02539 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC1.24□□□□□ -2.21
HIST1H1AQ02539 AC084851.1-201ENST00000529105 249 ntBASIC1.24□□□□□ -2.21
HIST1H1AQ02539 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
HIST1H1AQ02539 AC022254.1-201ENST00000567857 235 ntBASIC1.24□□□□□ -2.21
HIST1H1AQ02539 MIR4513-201ENST00000581077 86 ntBASIC1.24□□□□□ -2.21
HIST1H1AQ02539 AL031274.2-201ENST00000599419 203 ntBASIC1.24□□□□□ -2.21
HIST1H1AQ02539 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.24□□□□□ -2.21
HIST1H1AQ02539 AL671309.1-201ENST00000603750 544 ntBASIC1.24□□□□□ -2.21
HIST1H1AQ02539 AC103810.8-201ENST00000607347 118 ntBASIC1.24□□□□□ -2.21
HIST1H1AQ02539 TUG1_1.1-201ENST00000610654 145 ntBASIC1.24□□□□□ -2.21
HIST1H1AQ02539 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.24□□□□□ -2.21
HIST1H1AQ02539 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.24□□□□□ -2.21
HIST1H1AQ02539 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
HIST1H1AQ02539 AC005832.2-201ENST00000538921 1430 ntBASIC1.23□□□□□ -2.21
HIST1H1AQ02539 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
HIST1H1AQ02539 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
HIST1H1AQ02539 RNA5SP126-201ENST00000365092 109 ntBASIC1.23□□□□□ -2.21
HIST1H1AQ02539 RN7SKP101-201ENST00000411376 320 ntBASIC1.23□□□□□ -2.21
HIST1H1AQ02539 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.23□□□□□ -2.21
HIST1H1AQ02539 BOLA3P4-201ENST00000418151 400 ntBASIC1.23□□□□□ -2.21
HIST1H1AQ02539 HMGB3P12-201ENST00000438745 556 ntBASIC1.23□□□□□ -2.21
HIST1H1AQ02539 AL096803.2-201ENST00000450032 677 ntBASIC1.23□□□□□ -2.21
HIST1H1AQ02539 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.23□□□□□ -2.21
HIST1H1AQ02539 AC005410.1-202ENST00000460347 485 ntBASIC1.23□□□□□ -2.21
HIST1H1AQ02539 UBL5P3-201ENST00000475112 231 ntBASIC1.23□□□□□ -2.21
HIST1H1AQ02539 AC069528.1-202ENST00000482888 637 ntBASIC1.23□□□□□ -2.21
HIST1H1AQ02539 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
HIST1H1AQ02539 AC021146.2-201ENST00000504736 556 ntBASIC1.23□□□□□ -2.21
HIST1H1AQ02539 AC011352.3-201ENST00000505162 593 ntBASIC1.23□□□□□ -2.21
HIST1H1AQ02539 MRPS33P3-201ENST00000513456 322 ntBASIC1.23□□□□□ -2.21
HIST1H1AQ02539 EEF1A1P37-201ENST00000522748 715 ntBASIC1.23□□□□□ -2.21
HIST1H1AQ02539 AK6P1-201ENST00000540219 478 ntBASIC1.23□□□□□ -2.21
HIST1H1AQ02539 MTND4LP5-201ENST00000605152 292 ntBASIC1.23□□□□□ -2.21
HIST1H1AQ02539 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.23□□□□□ -2.21
HIST1H1AQ02539 MIR6130-201ENST00000619419 109 ntBASIC1.23□□□□□ -2.21
HIST1H1AQ02539 AC091304.6-201ENST00000619761 202 ntBASIC1.23□□□□□ -2.21
HIST1H1AQ02539 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
HIST1H1AQ02539 RNU6-486P-201ENST00000363116 107 ntBASIC1.22□□□□□ -2.21
HIST1H1AQ02539 RNU6-76P-201ENST00000384060 104 ntBASIC1.22□□□□□ -2.21
HIST1H1AQ02539 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.22□□□□□ -2.21
HIST1H1AQ02539 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.22□□□□□ -2.21
HIST1H1AQ02539 MTND2P29-201ENST00000438595 412 ntBASIC1.22□□□□□ -2.21
HIST1H1AQ02539 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.22□□□□□ -2.21
HIST1H1AQ02539 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.22□□□□□ -2.21
HIST1H1AQ02539 RPS20P22-201ENST00000473700 357 ntBASIC1.22□□□□□ -2.21
HIST1H1AQ02539 FO393415.2-201ENST00000480085 343 ntBASIC1.22□□□□□ -2.21
HIST1H1AQ02539 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.22□□□□□ -2.21
HIST1H1AQ02539 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
HIST1H1AQ02539 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.22□□□□□ -2.21
HIST1H1AQ02539 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.22□□□□□ -2.21
HIST1H1AQ02539 AL160236.1-201ENST00000556317 195 ntBASIC1.22□□□□□ -2.21
HIST1H1AQ02539 DUXAP1-201ENST00000556632 463 ntBASIC1.22□□□□□ -2.21
HIST1H1AQ02539 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.22□□□□□ -2.21
HIST1H1AQ02539 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.22□□□□□ -2.21
HIST1H1AQ02539 MIR4765-201ENST00000585007 77 ntBASIC1.22□□□□□ -2.21
HIST1H1AQ02539 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.22□□□□□ -2.21
HIST1H1AQ02539 AL121652.1-201ENST00000608851 448 ntBASIC1.22□□□□□ -2.21
HIST1H1AQ02539 AC013412.1-201ENST00000610687 192 ntBASIC1.22□□□□□ -2.21
HIST1H1AQ02539 uc_338.5-201ENST00000611839 155 ntBASIC1.22□□□□□ -2.21
HIST1H1AQ02539 VN1R9P-201ENST00000614184 867 ntBASIC1.22□□□□□ -2.21
HIST1H1AQ02539 AL590396.2-201ENST00000636511 1041 ntBASIC1.22□□□□□ -2.21
HIST1H1AQ02539 ZNF876P-202ENST00000398732 1485 ntBASIC1.22□□□□□ -2.21
HIST1H1AQ02539 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.21□□□□□ -2.22
HIST1H1AQ02539 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
HIST1H1AQ02539 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
HIST1H1AQ02539 MIR518A2-201ENST00000384966 87 ntBASIC1.21□□□□□ -2.22
HIST1H1AQ02539 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
HIST1H1AQ02539 AC074117.2-201ENST00000417130 397 ntBASIC1.21□□□□□ -2.22
HIST1H1AQ02539 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.21□□□□□ -2.22
HIST1H1AQ02539 MTCO3P46-201ENST00000425787 232 ntBASIC1.21□□□□□ -2.22
HIST1H1AQ02539 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC1.21□□□□□ -2.22
HIST1H1AQ02539 HSPE1P24-201ENST00000450782 238 ntBASIC1.21□□□□□ -2.22
HIST1H1AQ02539 AC023790.1-201ENST00000482174 347 ntBASIC1.21□□□□□ -2.22
HIST1H1AQ02539 AL049874.1-201ENST00000489560 388 ntBASIC1.21□□□□□ -2.22
HIST1H1AQ02539 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.21□□□□□ -2.22
HIST1H1AQ02539 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.21□□□□□ -2.22
HIST1H1AQ02539 SNORA25.15-201ENST00000516487 89 ntBASIC1.21□□□□□ -2.22
HIST1H1AQ02539 HSPA8P13-201ENST00000523715 472 ntBASIC1.21□□□□□ -2.22
HIST1H1AQ02539 AL359212.1-201ENST00000556608 614 ntBASIC1.21□□□□□ -2.22
HIST1H1AQ02539 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.21□□□□□ -2.22
HIST1H1AQ02539 AC011494.1-201ENST00000596454 237 ntBASIC1.21□□□□□ -2.22
HIST1H1AQ02539 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.21□□□□□ -2.22
HIST1H1AQ02539 AC068944.2-201ENST00000610373 403 ntBASIC1.21□□□□□ -2.22
HIST1H1AQ02539 MIR6845-201ENST00000613182 61 ntBASIC1.21□□□□□ -2.22
HIST1H1AQ02539 FRG1HP-204ENST00000617940 757 ntBASIC1.21□□□□□ -2.22
HIST1H1AQ02539 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.21□□□□□ -2.22
HIST1H1AQ02539 AC006026.1-201ENST00000444025 1803 ntBASIC1.21□□□□□ -2.22
HIST1H1AQ02539 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.21□□□□□ -2.22
HIST1H1AQ02539 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
HIST1H1AQ02539 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
HIST1H1AQ02539 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
HIST1H1AQ02539 AL161722.3-201ENST00000605789 2983 ntBASIC1.2□□□□□ -2.22
HIST1H1AQ02539 AL356292.1-201ENST00000283110 373 ntBASIC1.2□□□□□ -2.22
HIST1H1AQ02539 MIR504-201ENST00000385065 83 ntBASIC1.2□□□□□ -2.22
HIST1H1AQ02539 AL627390.1-201ENST00000396055 340 ntBASIC1.2□□□□□ -2.22
HIST1H1AQ02539 AL356131.1-201ENST00000405826 414 ntBASIC1.2□□□□□ -2.22
HIST1H1AQ02539 RNU2-47P-201ENST00000410649 186 ntBASIC1.2□□□□□ -2.22
HIST1H1AQ02539 RNU6-516P-201ENST00000411381 104 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms