Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 NDUFA5P4-201ENST00000436704 385 ntBASIC3.74□□□□□ -1.81
NKX6-1P78426 MTND4LP16-201ENST00000440828 295 ntBASIC3.74□□□□□ -1.81
NKX6-1P78426 AL162151.2-201ENST00000448875 158 ntBASIC3.74□□□□□ -1.81
NKX6-1P78426 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.74□□□□□ -1.81
NKX6-1P78426 CECR9-201ENST00000453421 199 ntBASIC3.74□□□□□ -1.81
NKX6-1P78426 RPL9P32-201ENST00000464118 620 ntBASIC3.74□□□□□ -1.81
NKX6-1P78426 DYNLL1P5-201ENST00000467158 270 ntBASIC3.74□□□□□ -1.81
NKX6-1P78426 RPL21P93-201ENST00000480465 489 ntBASIC3.74□□□□□ -1.81
NKX6-1P78426 RN7SL691P-201ENST00000494487 301 ntBASIC3.74□□□□□ -1.81
NKX6-1P78426 TRBVA-201ENST00000498804 316 ntBASIC3.74□□□□□ -1.81
NKX6-1P78426 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.74□□□□□ -1.81
NKX6-1P78426 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NKX6-1P78426 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.74□□□□□ -1.81
NKX6-1P78426 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.74□□□□□ -1.81
NKX6-1P78426 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.74□□□□□ -1.81
NKX6-1P78426 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.74□□□□□ -1.81
NKX6-1P78426 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.74□□□□□ -1.81
NKX6-1P78426 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.74□□□□□ -1.81
NKX6-1P78426 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.74□□□□□ -1.81
NKX6-1P78426 MTCO3P23-201ENST00000561363 289 ntBASIC3.74□□□□□ -1.81
NKX6-1P78426 MIR3944-201ENST00000581277 108 ntBASIC3.74□□□□□ -1.81
NKX6-1P78426 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.74□□□□□ -1.81
NKX6-1P78426 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.74□□□□□ -1.81
NKX6-1P78426 AC243960.4-201ENST00000600532 288 ntBASIC3.74□□□□□ -1.81
NKX6-1P78426 AC012119.1-201ENST00000603184 222 ntBASIC3.74□□□□□ -1.81
NKX6-1P78426 AL022345.1-201ENST00000607292 135 ntBASIC3.74□□□□□ -1.81
NKX6-1P78426 AL021997.2-201ENST00000615674 271 ntBASIC3.74□□□□□ -1.81
NKX6-1P78426 MIR6875-201ENST00000617506 72 ntBASIC3.74□□□□□ -1.81
NKX6-1P78426 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.74□□□□□ -1.81
NKX6-1P78426 AL359693.1-201ENST00000614959 2407 ntBASIC3.74□□□□□ -1.81
NKX6-1P78426 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NKX6-1P78426 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.74□□□□□ -1.81
NKX6-1P78426 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
NKX6-1P78426 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
NKX6-1P78426 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.74□□□□□ -1.81
NKX6-1P78426 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
NKX6-1P78426 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.73□□□□□ -1.81
NKX6-1P78426 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NKX6-1P78426 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NKX6-1P78426 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
NKX6-1P78426 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
NKX6-1P78426 Y_RNA.480-201ENST00000384364 102 ntBASIC3.73□□□□□ -1.81
NKX6-1P78426 FAT1P1-201ENST00000406588 507 ntBASIC3.73□□□□□ -1.81
NKX6-1P78426 RNU2-68P-201ENST00000410878 191 ntBASIC3.73□□□□□ -1.81
NKX6-1P78426 RN7SKP167-201ENST00000411047 285 ntBASIC3.73□□□□□ -1.81
NKX6-1P78426 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.73□□□□□ -1.81
NKX6-1P78426 HSPE1P1-201ENST00000421494 318 ntBASIC3.73□□□□□ -1.81
NKX6-1P78426 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.73□□□□□ -1.81
NKX6-1P78426 AC092047.1-201ENST00000424997 240 ntBASIC3.73□□□□□ -1.81
NKX6-1P78426 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.73□□□□□ -1.81
NKX6-1P78426 AC007389.2-201ENST00000434630 306 ntBASIC3.73□□□□□ -1.81
NKX6-1P78426 HMGB3P11-201ENST00000440127 604 ntBASIC3.73□□□□□ -1.81
NKX6-1P78426 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
NKX6-1P78426 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.73□□□□□ -1.81
NKX6-1P78426 PPP1R2P5-201ENST00000457256 603 ntBASIC3.73□□□□□ -1.81
NKX6-1P78426 RNU6-329P-201ENST00000459618 107 ntBASIC3.73□□□□□ -1.81
NKX6-1P78426 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.73□□□□□ -1.81
NKX6-1P78426 HMGB1P30-201ENST00000492455 606 ntBASIC3.73□□□□□ -1.81
NKX6-1P78426 AC008716.1-201ENST00000511084 513 ntBASIC3.73□□□□□ -1.81
NKX6-1P78426 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.73□□□□□ -1.81
NKX6-1P78426 SNORA19.2-201ENST00000516013 114 ntBASIC3.73□□□□□ -1.81
NKX6-1P78426 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.73□□□□□ -1.81
NKX6-1P78426 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.73□□□□□ -1.81
NKX6-1P78426 AP003122.3-201ENST00000526316 255 ntBASIC3.73□□□□□ -1.81
NKX6-1P78426 AC084851.1-201ENST00000529105 249 ntBASIC3.73□□□□□ -1.81
NKX6-1P78426 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
NKX6-1P78426 SYF2P1-201ENST00000550658 413 ntBASIC3.73□□□□□ -1.81
NKX6-1P78426 AC090115.3-201ENST00000553218 849 ntBASIC3.73□□□□□ -1.81
NKX6-1P78426 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.73□□□□□ -1.81
NKX6-1P78426 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.73□□□□□ -1.81
NKX6-1P78426 MIR4742-201ENST00000581069 85 ntBASIC3.73□□□□□ -1.81
NKX6-1P78426 BNIP3P25-201ENST00000596023 559 ntBASIC3.73□□□□□ -1.81
NKX6-1P78426 AC008739.3-201ENST00000603262 127 ntBASIC3.73□□□□□ -1.81
NKX6-1P78426 AL354984.3-201ENST00000604803 325 ntBASIC3.73□□□□□ -1.81
NKX6-1P78426 ATP1B3P1-201ENST00000605365 821 ntBASIC3.73□□□□□ -1.81
NKX6-1P78426 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.73□□□□□ -1.81
NKX6-1P78426 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.73□□□□□ -1.81
NKX6-1P78426 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.73□□□□□ -1.81
NKX6-1P78426 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.73□□□□□ -1.81
NKX6-1P78426 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.73□□□□□ -1.81
NKX6-1P78426 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.73□□□□□ -1.81
NKX6-1P78426 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.73□□□□□ -1.81
NKX6-1P78426 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
NKX6-1P78426 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.73□□□□□ -1.81
NKX6-1P78426 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
NKX6-1P78426 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NKX6-1P78426 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NKX6-1P78426 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NKX6-1P78426 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NKX6-1P78426 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.72□□□□□ -1.81
NKX6-1P78426 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.72□□□□□ -1.81
NKX6-1P78426 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NKX6-1P78426 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NKX6-1P78426 RNA5SP387-201ENST00000364226 106 ntBASIC3.72□□□□□ -1.81
NKX6-1P78426 RNA5SP175-201ENST00000364275 119 ntBASIC3.72□□□□□ -1.81
NKX6-1P78426 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
NKX6-1P78426 RNU6-140P-201ENST00000384566 108 ntBASIC3.72□□□□□ -1.81
NKX6-1P78426 RNU6-1179P-201ENST00000384667 107 ntBASIC3.72□□□□□ -1.81
NKX6-1P78426 AL583835.1-201ENST00000399570 407 ntBASIC3.72□□□□□ -1.81
NKX6-1P78426 AL591034.1-201ENST00000407447 340 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms