Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LMO4P61968 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
LMO4P61968 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.78□□□□□ -1.96
LMO4P61968 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LMO4P61968 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LMO4P61968 RNU6-845P-201ENST00000362578 103 ntBASIC2.78□□□□□ -1.96
LMO4P61968 RNA5SP322-201ENST00000363617 119 ntBASIC2.78□□□□□ -1.96
LMO4P61968 Y_RNA.234-201ENST00000364409 97 ntBASIC2.78□□□□□ -1.96
LMO4P61968 SNORD81.2-201ENST00000365153 76 ntBASIC2.78□□□□□ -1.96
LMO4P61968 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
LMO4P61968 RNU6-1207P-201ENST00000384343 107 ntBASIC2.78□□□□□ -1.96
LMO4P61968 SNORA48.2-201ENST00000390926 124 ntBASIC2.78□□□□□ -1.96
LMO4P61968 AL356432.1-201ENST00000405809 419 ntBASIC2.78□□□□□ -1.96
LMO4P61968 RNU2-9P-201ENST00000410194 145 ntBASIC2.78□□□□□ -1.96
LMO4P61968 RNU4-65P-201ENST00000410473 140 ntBASIC2.78□□□□□ -1.96
LMO4P61968 Z99755.1-201ENST00000414048 380 ntBASIC2.78□□□□□ -1.96
LMO4P61968 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.78□□□□□ -1.96
LMO4P61968 RPS15AP12-201ENST00000419498 388 ntBASIC2.78□□□□□ -1.96
LMO4P61968 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.78□□□□□ -1.96
LMO4P61968 BNIP3P2-201ENST00000441221 577 ntBASIC2.78□□□□□ -1.96
LMO4P61968 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.78□□□□□ -1.96
LMO4P61968 snoU13.8-201ENST00000458890 104 ntBASIC2.78□□□□□ -1.96
LMO4P61968 RNU6-261P-201ENST00000459506 102 ntBASIC2.78□□□□□ -1.96
LMO4P61968 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.78□□□□□ -1.96
LMO4P61968 RN7SL504P-201ENST00000494496 287 ntBASIC2.78□□□□□ -1.96
LMO4P61968 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.78□□□□□ -1.96
LMO4P61968 AC110794.1-201ENST00000505816 425 ntBASIC2.78□□□□□ -1.96
LMO4P61968 MTCO3P9-201ENST00000506989 781 ntBASIC2.78□□□□□ -1.96
LMO4P61968 APOOP4-201ENST00000513530 597 ntBASIC2.78□□□□□ -1.96
LMO4P61968 SCARNA15.1-201ENST00000516384 125 ntBASIC2.78□□□□□ -1.96
LMO4P61968 SNORA70.19-201ENST00000516717 90 ntBASIC2.78□□□□□ -1.96
LMO4P61968 Y_RNA.701-201ENST00000516812 110 ntBASIC2.78□□□□□ -1.96
LMO4P61968 RNA5SP337-201ENST00000517007 109 ntBASIC2.78□□□□□ -1.96
LMO4P61968 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.78□□□□□ -1.96
LMO4P61968 AP003072.2-201ENST00000527756 676 ntBASIC2.78□□□□□ -1.96
LMO4P61968 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LMO4P61968 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.78□□□□□ -1.96
LMO4P61968 OR5B19P-201ENST00000531766 928 ntBASIC2.78□□□□□ -1.96
LMO4P61968 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.78□□□□□ -1.96
LMO4P61968 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LMO4P61968 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.78□□□□□ -1.96
LMO4P61968 AC093027.1-201ENST00000546698 429 ntBASIC2.78□□□□□ -1.96
LMO4P61968 AC078795.3-201ENST00000602913 472 ntBASIC2.78□□□□□ -1.96
LMO4P61968 Z84480.1-201ENST00000605131 311 ntBASIC2.78□□□□□ -1.96
LMO4P61968 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.78□□□□□ -1.96
LMO4P61968 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.78□□□□□ -1.96
LMO4P61968 AL596245.1-201ENST00000618994 362 ntBASIC2.78□□□□□ -1.96
LMO4P61968 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
LMO4P61968 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
LMO4P61968 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LMO4P61968 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
LMO4P61968 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LMO4P61968 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.78□□□□□ -1.97
LMO4P61968 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.78□□□□□ -1.97
LMO4P61968 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC2.78□□□□□ -1.97
LMO4P61968 IDE-202ENST00000371581 4480 ntTSL 2 BASIC2.78□□□□□ -1.97
LMO4P61968 FAM35DP-201ENST00000323387 2712 ntBASIC2.77□□□□□ -1.97
LMO4P61968 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC2.77□□□□□ -1.97
LMO4P61968 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
LMO4P61968 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
LMO4P61968 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC2.77□□□□□ -1.97
LMO4P61968 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
LMO4P61968 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
LMO4P61968 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC2.77□□□□□ -1.97
LMO4P61968 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.77□□□□□ -1.97
LMO4P61968 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LMO4P61968 RNA5SP295-201ENST00000362655 121 ntBASIC2.77□□□□□ -1.97
LMO4P61968 Y_RNA.157-201ENST00000363638 102 ntBASIC2.77□□□□□ -1.97
LMO4P61968 RNU6-108P-201ENST00000365558 107 ntBASIC2.77□□□□□ -1.97
LMO4P61968 AL357075.1-201ENST00000404107 726 ntBASIC2.77□□□□□ -1.97
LMO4P61968 AL354719.1-201ENST00000406535 843 ntBASIC2.77□□□□□ -1.97
LMO4P61968 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.77□□□□□ -1.97
LMO4P61968 ELOCP4-201ENST00000420090 333 ntBASIC2.77□□□□□ -1.97
LMO4P61968 RPL36AP53-201ENST00000432891 316 ntBASIC2.77□□□□□ -1.97
LMO4P61968 GPR143P-201ENST00000434155 205 ntBASIC2.77□□□□□ -1.97
LMO4P61968 AC004866.2-201ENST00000438285 481 ntBASIC2.77□□□□□ -1.97
LMO4P61968 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.77□□□□□ -1.97
LMO4P61968 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC2.77□□□□□ -1.97
LMO4P61968 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.77□□□□□ -1.97
LMO4P61968 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC2.77□□□□□ -1.97
LMO4P61968 AL353691.1-201ENST00000451332 387 ntBASIC2.77□□□□□ -1.97
LMO4P61968 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.77□□□□□ -1.97
LMO4P61968 CACYBPP2-201ENST00000453625 678 ntBASIC2.77□□□□□ -1.97
LMO4P61968 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.77□□□□□ -1.97
LMO4P61968 AC233702.1-201ENST00000482905 502 ntBASIC2.77□□□□□ -1.97
LMO4P61968 AC055855.1-201ENST00000489563 579 ntBASIC2.77□□□□□ -1.97
LMO4P61968 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.77□□□□□ -1.97
LMO4P61968 FGF7P4-201ENST00000509595 295 ntBASIC2.77□□□□□ -1.97
LMO4P61968 PCBP2P3-201ENST00000509726 843 ntBASIC2.77□□□□□ -1.97
LMO4P61968 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.77□□□□□ -1.97
LMO4P61968 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.77□□□□□ -1.97
LMO4P61968 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC2.77□□□□□ -1.97
LMO4P61968 RNA5SP401-201ENST00000515920 127 ntBASIC2.77□□□□□ -1.97
LMO4P61968 RNU1-61P-201ENST00000516107 151 ntBASIC2.77□□□□□ -1.97
LMO4P61968 SCARNA24.1-201ENST00000516465 137 ntBASIC2.77□□□□□ -1.97
LMO4P61968 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.77□□□□□ -1.97
LMO4P61968 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.77□□□□□ -1.97
LMO4P61968 AP000907.2-201ENST00000530827 353 ntBASIC2.77□□□□□ -1.97
LMO4P61968 MIR5004-201ENST00000579078 107 ntBASIC2.77□□□□□ -1.97
LMO4P61968 AC011471.1-201ENST00000585766 187 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms