Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
VBP1P61758 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
VBP1P61758 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
VBP1P61758 TRIM60P5Y-201ENST00000413946 574 ntBASIC1.49□□□□□ -2.17
VBP1P61758 AL449283.1-202ENST00000418249 604 ntBASIC1.49□□□□□ -2.17
VBP1P61758 EIF4EP2-201ENST00000422816 654 ntBASIC1.49□□□□□ -2.17
VBP1P61758 AC019178.2-201ENST00000423595 505 ntBASIC1.49□□□□□ -2.17
VBP1P61758 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC1.49□□□□□ -2.17
VBP1P61758 RPL22P13-201ENST00000493291 347 ntBASIC1.49□□□□□ -2.17
VBP1P61758 ANXA2P1-201ENST00000505539 926 ntBASIC1.49□□□□□ -2.17
VBP1P61758 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC1.49□□□□□ -2.17
VBP1P61758 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC1.49□□□□□ -2.17
VBP1P61758 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.49□□□□□ -2.17
VBP1P61758 AC024224.1-201ENST00000538284 609 ntBASIC1.49□□□□□ -2.17
VBP1P61758 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.49□□□□□ -2.17
VBP1P61758 AC009063.1-201ENST00000563342 702 ntBASIC1.49□□□□□ -2.17
VBP1P61758 AC093519.1-201ENST00000566109 298 ntBASIC1.49□□□□□ -2.17
VBP1P61758 AC023824.3-201ENST00000569003 562 ntBASIC1.49□□□□□ -2.17
VBP1P61758 AP003973.1-201ENST00000604639 691 ntBASIC1.49□□□□□ -2.17
VBP1P61758 AC013476.2-201ENST00000614456 459 ntBASIC1.49□□□□□ -2.17
VBP1P61758 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.49□□□□□ -2.17
VBP1P61758 AC007490.1-201ENST00000624321 703 ntBASIC1.49□□□□□ -2.17
VBP1P61758 MTND5P10-201ENST00000603719 1809 ntBASIC1.49□□□□□ -2.17
VBP1P61758 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
VBP1P61758 RNU6-338P-201ENST00000383888 105 ntBASIC1.48□□□□□ -2.17
VBP1P61758 USP9YP19-201ENST00000412165 485 ntBASIC1.48□□□□□ -2.17
VBP1P61758 USP9YP13-201ENST00000417797 480 ntBASIC1.48□□□□□ -2.17
VBP1P61758 AC008173.1-201ENST00000418901 264 ntBASIC1.48□□□□□ -2.17
VBP1P61758 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC1.48□□□□□ -2.17
VBP1P61758 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.48□□□□□ -2.17
VBP1P61758 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.48□□□□□ -2.17
VBP1P61758 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.48□□□□□ -2.17
VBP1P61758 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.48□□□□□ -2.17
VBP1P61758 AL353691.1-201ENST00000451332 387 ntBASIC1.48□□□□□ -2.17
VBP1P61758 SUMO2P2-201ENST00000456482 255 ntBASIC1.48□□□□□ -2.17
VBP1P61758 RPS20P20-201ENST00000460498 340 ntBASIC1.48□□□□□ -2.17
VBP1P61758 AC096576.1-201ENST00000489014 359 ntBASIC1.48□□□□□ -2.17
VBP1P61758 AC106872.3-201ENST00000495104 446 ntBASIC1.48□□□□□ -2.17
VBP1P61758 RPL23AP63-201ENST00000498752 471 ntBASIC1.48□□□□□ -2.17
VBP1P61758 AC048346.1-201ENST00000510247 144 ntBASIC1.48□□□□□ -2.17
VBP1P61758 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
VBP1P61758 AC124283.4-201ENST00000581815 456 ntBASIC1.48□□□□□ -2.17
VBP1P61758 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.48□□□□□ -2.17
VBP1P61758 AP001429.1-201ENST00000602568 530 ntBASIC1.48□□□□□ -2.17
VBP1P61758 MTCYBP22-201ENST00000603788 447 ntBASIC1.48□□□□□ -2.17
VBP1P61758 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.48□□□□□ -2.17
VBP1P61758 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.48□□□□□ -2.17
VBP1P61758 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC1.47□□□□□ -2.17
VBP1P61758 SNORA80A-201ENST00000363922 136 ntBASIC1.47□□□□□ -2.17
VBP1P61758 SNORA70.4-201ENST00000365509 134 ntBASIC1.47□□□□□ -2.17
VBP1P61758 AL356967.1-201ENST00000406305 431 ntBASIC1.47□□□□□ -2.17
VBP1P61758 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
VBP1P61758 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.47□□□□□ -2.17
VBP1P61758 AL160275.3-201ENST00000423876 471 ntBASIC1.47□□□□□ -2.17
VBP1P61758 AC092017.2-201ENST00000427600 362 ntBASIC1.47□□□□□ -2.17
VBP1P61758 AL356320.1-201ENST00000429616 163 ntBASIC1.47□□□□□ -2.17
VBP1P61758 ZNF965P-201ENST00000432501 817 ntBASIC1.47□□□□□ -2.17
VBP1P61758 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.47□□□□□ -2.17
VBP1P61758 AC241584.1-201ENST00000438469 1241 ntBASIC1.47□□□□□ -2.17
VBP1P61758 AC118469.1-201ENST00000442943 488 ntBASIC1.47□□□□□ -2.17
VBP1P61758 HSPE1P24-201ENST00000450782 238 ntBASIC1.47□□□□□ -2.17
VBP1P61758 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.47□□□□□ -2.17
VBP1P61758 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.47□□□□□ -2.17
VBP1P61758 AC117503.1-201ENST00000472241 394 ntBASIC1.47□□□□□ -2.17
VBP1P61758 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.47□□□□□ -2.17
VBP1P61758 AC109471.1-201ENST00000511631 612 ntBASIC1.47□□□□□ -2.17
VBP1P61758 SMURF2P1-201ENST00000514992 481 ntBASIC1.47□□□□□ -2.17
VBP1P61758 AP005435.4-201ENST00000529514 284 ntBASIC1.47□□□□□ -2.17
VBP1P61758 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.47□□□□□ -2.17
VBP1P61758 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
VBP1P61758 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.47□□□□□ -2.17
VBP1P61758 AC025918.2-201ENST00000558683 763 ntBASIC1.47□□□□□ -2.17
VBP1P61758 AC074050.1-201ENST00000563247 211 ntBASIC1.47□□□□□ -2.17
VBP1P61758 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.47□□□□□ -2.17
VBP1P61758 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.47□□□□□ -2.17
VBP1P61758 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.47□□□□□ -2.17
VBP1P61758 uc_338.5-201ENST00000611839 155 ntBASIC1.47□□□□□ -2.17
VBP1P61758 AC024257.5-201ENST00000612739 531 ntBASIC1.47□□□□□ -2.17
VBP1P61758 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.47□□□□□ -2.17
VBP1P61758 AL512506.2-201ENST00000624472 458 ntBASIC1.47□□□□□ -2.17
VBP1P61758 AP000648.3-201ENST00000623539 4507 ntBASIC1.47□□□□□ -2.17
VBP1P61758 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.47□□□□□ -2.17
VBP1P61758 ZNF355P-201ENST00000427301 3216 ntBASIC1.46□□□□□ -2.18
VBP1P61758 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.46□□□□□ -2.18
VBP1P61758 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.46□□□□□ -2.18
VBP1P61758 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
VBP1P61758 MIR9-3-201ENST00000385084 90 ntBASIC1.46□□□□□ -2.18
VBP1P61758 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.46□□□□□ -2.18
VBP1P61758 MIR1294-201ENST00000408503 142 ntBASIC1.46□□□□□ -2.18
VBP1P61758 UBE2Q2P12-201ENST00000414573 204 ntBASIC1.46□□□□□ -2.18
VBP1P61758 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.46□□□□□ -2.18
VBP1P61758 MTCO1P53-201ENST00000441633 699 ntBASIC1.46□□□□□ -2.18
VBP1P61758 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.46□□□□□ -2.18
VBP1P61758 USP9YP34-201ENST00000453983 808 ntBASIC1.46□□□□□ -2.18
VBP1P61758 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.46□□□□□ -2.18
VBP1P61758 RPS29P23-201ENST00000458635 123 ntBASIC1.46□□□□□ -2.18
VBP1P61758 AC114801.2-201ENST00000503825 781 ntBASIC1.46□□□□□ -2.18
VBP1P61758 AC034114.1-201ENST00000520293 285 ntBASIC1.46□□□□□ -2.18
VBP1P61758 EEF1A1P37-201ENST00000522748 715 ntBASIC1.46□□□□□ -2.18
VBP1P61758 AC084851.1-201ENST00000529105 249 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms