Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 MIR3167-201ENST00000579623 85 ntBASIC2.13□□□□□ -2.07
CLDN18P56856 MIR5694-201ENST00000581190 76 ntBASIC2.13□□□□□ -2.07
CLDN18P56856 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.13□□□□□ -2.07
CLDN18P56856 AC060766.3-201ENST00000591442 263 ntBASIC2.13□□□□□ -2.07
CLDN18P56856 SNORD14A-201ENST00000606526 91 ntBASIC2.13□□□□□ -2.07
CLDN18P56856 AC067747.1-201ENST00000608026 250 ntBASIC2.13□□□□□ -2.07
CLDN18P56856 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.13□□□□□ -2.07
CLDN18P56856 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CLDN18P56856 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CLDN18P56856 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.13□□□□□ -2.07
CLDN18P56856 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.12□□□□□ -2.07
CLDN18P56856 AC006020.1-201ENST00000420179 1854 ntBASIC2.12□□□□□ -2.07
CLDN18P56856 MTND5P30-201ENST00000452896 1731 ntBASIC2.12□□□□□ -2.07
CLDN18P56856 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
CLDN18P56856 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.12□□□□□ -2.07
CLDN18P56856 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CLDN18P56856 RNU6-853P-201ENST00000364306 107 ntBASIC2.12□□□□□ -2.07
CLDN18P56856 RNU1-73P-201ENST00000383971 164 ntBASIC2.12□□□□□ -2.07
CLDN18P56856 RSL24D1P4-201ENST00000400938 484 ntBASIC2.12□□□□□ -2.07
CLDN18P56856 RNU2-68P-201ENST00000410878 191 ntBASIC2.12□□□□□ -2.07
CLDN18P56856 AL953862.1-201ENST00000423016 168 ntBASIC2.12□□□□□ -2.07
CLDN18P56856 ELOCP14-201ENST00000428070 331 ntBASIC2.12□□□□□ -2.07
CLDN18P56856 AC010153.1-201ENST00000432862 727 ntBASIC2.12□□□□□ -2.07
CLDN18P56856 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.12□□□□□ -2.07
CLDN18P56856 ELOCP7-201ENST00000439968 331 ntBASIC2.12□□□□□ -2.07
CLDN18P56856 HIGD1AP2-201ENST00000446367 280 ntBASIC2.12□□□□□ -2.07
CLDN18P56856 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.12□□□□□ -2.07
CLDN18P56856 AC013267.1-201ENST00000458227 267 ntBASIC2.12□□□□□ -2.07
CLDN18P56856 RN7SL429P-201ENST00000479090 223 ntBASIC2.12□□□□□ -2.07
CLDN18P56856 RN7SL489P-201ENST00000486185 223 ntBASIC2.12□□□□□ -2.07
CLDN18P56856 RN7SL327P-201ENST00000488659 223 ntBASIC2.12□□□□□ -2.07
CLDN18P56856 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.12□□□□□ -2.07
CLDN18P56856 AC008549.1-201ENST00000512900 643 ntBASIC2.12□□□□□ -2.07
CLDN18P56856 SNORA31.6-201ENST00000516241 130 ntBASIC2.12□□□□□ -2.07
CLDN18P56856 RNA5SP165-201ENST00000517142 115 ntBASIC2.12□□□□□ -2.07
CLDN18P56856 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.12□□□□□ -2.07
CLDN18P56856 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.12□□□□□ -2.07
CLDN18P56856 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.12□□□□□ -2.07
CLDN18P56856 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.12□□□□□ -2.07
CLDN18P56856 AC060771.1-201ENST00000582031 164 ntBASIC2.12□□□□□ -2.07
CLDN18P56856 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.12□□□□□ -2.07
CLDN18P56856 MIR4765-201ENST00000585007 77 ntBASIC2.12□□□□□ -2.07
CLDN18P56856 AC006270.3-201ENST00000605967 1036 ntBASIC2.12□□□□□ -2.07
CLDN18P56856 AC090186.1-201ENST00000605991 572 ntBASIC2.12□□□□□ -2.07
CLDN18P56856 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CLDN18P56856 AC013412.1-201ENST00000610687 192 ntBASIC2.12□□□□□ -2.07
CLDN18P56856 AC245884.12-201ENST00000615364 59 ntBASIC2.12□□□□□ -2.07
CLDN18P56856 RN7SL853P-201ENST00000617250 223 ntBASIC2.12□□□□□ -2.07
CLDN18P56856 AC064859.1-201ENST00000624741 174 ntBASIC2.12□□□□□ -2.07
CLDN18P56856 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CLDN18P56856 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.12□□□□□ -2.07
CLDN18P56856 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.12□□□□□ -2.07
CLDN18P56856 SNORD116-12-201ENST00000384468 92 ntBASIC2.11□□□□□ -2.07
CLDN18P56856 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.11□□□□□ -2.07
CLDN18P56856 RPL32P28-201ENST00000443577 397 ntBASIC2.11□□□□□ -2.07
CLDN18P56856 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.11□□□□□ -2.07
CLDN18P56856 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.11□□□□□ -2.07
CLDN18P56856 TPT1P14-201ENST00000448018 505 ntBASIC2.11□□□□□ -2.07
CLDN18P56856 TRBV1-201ENST00000476502 284 ntBASIC2.11□□□□□ -2.07
CLDN18P56856 AC072039.1-201ENST00000477611 581 ntBASIC2.11□□□□□ -2.07
CLDN18P56856 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CLDN18P56856 AC108729.1-201ENST00000487812 947 ntBASIC2.11□□□□□ -2.07
CLDN18P56856 RPS27P27-201ENST00000498779 255 ntBASIC2.11□□□□□ -2.07
CLDN18P56856 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.11□□□□□ -2.07
CLDN18P56856 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.11□□□□□ -2.07
CLDN18P56856 RNU6-276P-201ENST00000516114 96 ntBASIC2.11□□□□□ -2.07
CLDN18P56856 RNU6-927P-201ENST00000516199 100 ntBASIC2.11□□□□□ -2.07
CLDN18P56856 RNA5SP281-201ENST00000516504 135 ntBASIC2.11□□□□□ -2.07
CLDN18P56856 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
CLDN18P56856 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.11□□□□□ -2.07
CLDN18P56856 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.11□□□□□ -2.07
CLDN18P56856 PRELID2P1-201ENST00000552837 301 ntBASIC2.11□□□□□ -2.07
CLDN18P56856 ISCA1P3-201ENST00000577104 373 ntBASIC2.11□□□□□ -2.07
CLDN18P56856 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.11□□□□□ -2.07
CLDN18P56856 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.11□□□□□ -2.07
CLDN18P56856 AL450336.1-201ENST00000605180 586 ntBASIC2.11□□□□□ -2.07
CLDN18P56856 AC069294.1-201ENST00000608397 350 ntBASIC2.11□□□□□ -2.07
CLDN18P56856 AL589743.7-201ENST00000612637 233 ntBASIC2.11□□□□□ -2.07
CLDN18P56856 AC009159.1-201ENST00000618386 642 ntBASIC2.11□□□□□ -2.07
CLDN18P56856 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.11□□□□□ -2.07
CLDN18P56856 MIR203B-201ENST00000636080 86 ntBASIC2.11□□□□□ -2.07
CLDN18P56856 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CLDN18P56856 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.11□□□□□ -2.07
CLDN18P56856 AC011477.1-204ENST00000623416 1325 ntBASIC2.11□□□□□ -2.07
CLDN18P56856 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
CLDN18P56856 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.1□□□□□ -2.07
CLDN18P56856 SNORA3A-201ENST00000364113 130 ntBASIC2.1□□□□□ -2.07
CLDN18P56856 SNORA3.2-201ENST00000408221 125 ntBASIC2.1□□□□□ -2.07
CLDN18P56856 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.1□□□□□ -2.07
CLDN18P56856 VN1R51P-201ENST00000411675 945 ntBASIC2.1□□□□□ -2.07
CLDN18P56856 USP9YP33-201ENST00000412220 421 ntBASIC2.1□□□□□ -2.07
CLDN18P56856 RPL21P24-201ENST00000413752 448 ntBASIC2.1□□□□□ -2.07
CLDN18P56856 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.1□□□□□ -2.07
CLDN18P56856 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.1□□□□□ -2.07
CLDN18P56856 AL109913.1-201ENST00000421173 514 ntBASIC2.1□□□□□ -2.07
CLDN18P56856 MTND1P28-201ENST00000435623 950 ntBASIC2.1□□□□□ -2.07
CLDN18P56856 USP9YP35-201ENST00000435696 412 ntBASIC2.1□□□□□ -2.07
CLDN18P56856 FABP5P14-201ENST00000437273 393 ntBASIC2.1□□□□□ -2.07
CLDN18P56856 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.1□□□□□ -2.07
CLDN18P56856 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms