Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 OR5H15-201ENST00000383696 930 ntBASIC2.15□□□□□ -2.07
CLDN6P56747 AL356421.1-201ENST00000403255 413 ntBASIC2.15□□□□□ -2.07
CLDN6P56747 SNORA11.4-201ENST00000408823 129 ntBASIC2.15□□□□□ -2.07
CLDN6P56747 AL513331.1-201ENST00000411908 397 ntBASIC2.15□□□□□ -2.07
CLDN6P56747 AC023141.4-201ENST00000412031 328 ntBASIC2.15□□□□□ -2.07
CLDN6P56747 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.15□□□□□ -2.07
CLDN6P56747 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.15□□□□□ -2.07
CLDN6P56747 COX6CP12-201ENST00000446748 202 ntBASIC2.15□□□□□ -2.07
CLDN6P56747 MTND1P31-201ENST00000449206 961 ntBASIC2.15□□□□□ -2.07
CLDN6P56747 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.15□□□□□ -2.07
CLDN6P56747 MTND1P9-201ENST00000453775 944 ntBASIC2.15□□□□□ -2.07
CLDN6P56747 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.15□□□□□ -2.07
CLDN6P56747 AC106872.3-201ENST00000495104 446 ntBASIC2.15□□□□□ -2.07
CLDN6P56747 AC016550.1-201ENST00000505348 785 ntBASIC2.15□□□□□ -2.07
CLDN6P56747 SUMO2P5-201ENST00000506790 245 ntBASIC2.15□□□□□ -2.07
CLDN6P56747 AC113347.3-201ENST00000509113 148 ntBASIC2.15□□□□□ -2.07
CLDN6P56747 AC093752.1-206ENST00000511823 336 ntBASIC2.15□□□□□ -2.07
CLDN6P56747 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.15□□□□□ -2.07
CLDN6P56747 RNU5F-8P-201ENST00000515941 111 ntBASIC2.15□□□□□ -2.07
CLDN6P56747 RNA5SP402-201ENST00000517148 110 ntBASIC2.15□□□□□ -2.07
CLDN6P56747 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.15□□□□□ -2.07
CLDN6P56747 HMGN1P28-201ENST00000521340 364 ntBASIC2.15□□□□□ -2.07
CLDN6P56747 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.15□□□□□ -2.07
CLDN6P56747 OR4R1P-201ENST00000529879 463 ntBASIC2.15□□□□□ -2.07
CLDN6P56747 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.15□□□□□ -2.07
CLDN6P56747 AC023824.2-201ENST00000566185 400 ntBASIC2.15□□□□□ -2.07
CLDN6P56747 AL512347.1-201ENST00000566420 503 ntBASIC2.15□□□□□ -2.07
CLDN6P56747 AC004987.4-201ENST00000603383 338 ntBASIC2.15□□□□□ -2.07
CLDN6P56747 AL137847.3-201ENST00000611521 109 ntBASIC2.15□□□□□ -2.07
CLDN6P56747 AC013562.2-201ENST00000611632 603 ntBASIC2.15□□□□□ -2.07
CLDN6P56747 RNU6-1192P-201ENST00000612197 107 ntBASIC2.15□□□□□ -2.07
CLDN6P56747 AL138478.1-201ENST00000612252 832 ntBASIC2.15□□□□□ -2.07
CLDN6P56747 RNU6-489P-201ENST00000618289 107 ntBASIC2.15□□□□□ -2.07
CLDN6P56747 OR1S1-201ENST00000624470 978 ntBASIC2.15□□□□□ -2.07
CLDN6P56747 AC019226.1-201ENST00000625666 515 ntBASIC2.15□□□□□ -2.07
CLDN6P56747 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.15□□□□□ -2.07
CLDN6P56747 AC080128.1-201ENST00000474389 1917 ntBASIC2.15□□□□□ -2.07
CLDN6P56747 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
CLDN6P56747 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.14□□□□□ -2.07
CLDN6P56747 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CLDN6P56747 SNORA67.1-201ENST00000364749 141 ntBASIC2.14□□□□□ -2.07
CLDN6P56747 SNORA41-201ENST00000384675 132 ntBASIC2.14□□□□□ -2.07
CLDN6P56747 TXNP7-201ENST00000406296 293 ntBASIC2.14□□□□□ -2.07
CLDN6P56747 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.14□□□□□ -2.07
CLDN6P56747 TIMM9P2-201ENST00000419324 266 ntBASIC2.14□□□□□ -2.07
CLDN6P56747 SEPT2P1-201ENST00000419651 180 ntBASIC2.14□□□□□ -2.07
CLDN6P56747 ISCA1P6-201ENST00000427740 390 ntBASIC2.14□□□□□ -2.07
CLDN6P56747 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.14□□□□□ -2.07
CLDN6P56747 MTND5P14-201ENST00000441481 1267 ntBASIC2.14□□□□□ -2.07
CLDN6P56747 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CLDN6P56747 AC009961.3-201ENST00000449832 765 ntBASIC2.14□□□□□ -2.07
CLDN6P56747 RPL38P4-201ENST00000502376 214 ntBASIC2.14□□□□□ -2.07
CLDN6P56747 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.14□□□□□ -2.07
CLDN6P56747 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC2.14□□□□□ -2.07
CLDN6P56747 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.14□□□□□ -2.07
CLDN6P56747 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.14□□□□□ -2.07
CLDN6P56747 SNRPGP18-201ENST00000553000 214 ntBASIC2.14□□□□□ -2.07
CLDN6P56747 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.14□□□□□ -2.07
CLDN6P56747 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC2.14□□□□□ -2.07
CLDN6P56747 MIR5007-201ENST00000583098 95 ntBASIC2.14□□□□□ -2.07
CLDN6P56747 VN1R83P-201ENST00000595685 445 ntBASIC2.14□□□□□ -2.07
CLDN6P56747 AC024060.1-201ENST00000607052 494 ntBASIC2.14□□□□□ -2.07
CLDN6P56747 AC067747.1-201ENST00000608026 250 ntBASIC2.14□□□□□ -2.07
CLDN6P56747 SDR42E1P2-201ENST00000614861 481 ntBASIC2.14□□□□□ -2.07
CLDN6P56747 AL160394.1-201ENST00000624765 724 ntBASIC2.14□□□□□ -2.07
CLDN6P56747 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
CLDN6P56747 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.14□□□□□ -2.07
CLDN6P56747 MTND5P29-201ENST00000458676 1807 ntBASIC2.14□□□□□ -2.07
CLDN6P56747 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.14□□□□□ -2.07
CLDN6P56747 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CLDN6P56747 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CLDN6P56747 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CLDN6P56747 RNU1-17P-201ENST00000363022 152 ntBASIC2.13□□□□□ -2.07
CLDN6P56747 SNORA38-201ENST00000363946 132 ntBASIC2.13□□□□□ -2.07
CLDN6P56747 RNU4-51P-201ENST00000364206 140 ntBASIC2.13□□□□□ -2.07
CLDN6P56747 RNU6-750P-201ENST00000390946 107 ntBASIC2.13□□□□□ -2.07
CLDN6P56747 ANAPC10P1-201ENST00000395991 556 ntBASIC2.13□□□□□ -2.07
CLDN6P56747 RNU6-1328P-201ENST00000410938 106 ntBASIC2.13□□□□□ -2.07
CLDN6P56747 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CLDN6P56747 AC019070.1-201ENST00000415008 1024 ntBASIC2.13□□□□□ -2.07
CLDN6P56747 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.13□□□□□ -2.07
CLDN6P56747 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.13□□□□□ -2.07
CLDN6P56747 GTF2IP3-201ENST00000433887 494 ntBASIC2.13□□□□□ -2.07
CLDN6P56747 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.13□□□□□ -2.07
CLDN6P56747 CR769767.1-201ENST00000436337 346 ntBASIC2.13□□□□□ -2.07
CLDN6P56747 RN7SKP210-201ENST00000459176 261 ntBASIC2.13□□□□□ -2.07
CLDN6P56747 AC104563.1-201ENST00000476147 376 ntBASIC2.13□□□□□ -2.07
CLDN6P56747 RBM43P1-201ENST00000476891 1081 ntBASIC2.13□□□□□ -2.07
CLDN6P56747 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.13□□□□□ -2.07
CLDN6P56747 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CLDN6P56747 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
CLDN6P56747 AC098591.2-201ENST00000510152 315 ntBASIC2.13□□□□□ -2.07
CLDN6P56747 HMGB3P3-201ENST00000510526 400 ntBASIC2.13□□□□□ -2.07
CLDN6P56747 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.13□□□□□ -2.07
CLDN6P56747 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.13□□□□□ -2.07
CLDN6P56747 RNU6-295P-201ENST00000516901 104 ntBASIC2.13□□□□□ -2.07
CLDN6P56747 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.13□□□□□ -2.07
CLDN6P56747 CYCSP2-201ENST00000558168 301 ntBASIC2.13□□□□□ -2.07
CLDN6P56747 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.13□□□□□ -2.07
CLDN6P56747 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms