Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC008121.1-201ENST00000603244 268 ntBASIC4.14□□□□□ -1.75
GFRA1P56159 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.14□□□□□ -1.75
GFRA1P56159 AC004805.2-201ENST00000605382 482 ntBASIC4.14□□□□□ -1.75
GFRA1P56159 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.14□□□□□ -1.75
GFRA1P56159 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.14□□□□□ -1.75
GFRA1P56159 FP236240.3-201ENST00000623061 327 ntBASIC4.14□□□□□ -1.75
GFRA1P56159 AC099506.2-201ENST00000623074 221 ntBASIC4.14□□□□□ -1.75
GFRA1P56159 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.14□□□□□ -1.75
GFRA1P56159 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.14□□□□□ -1.75
GFRA1P56159 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.14□□□□□ -1.75
GFRA1P56159 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
GFRA1P56159 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
GFRA1P56159 AC126323.6-202ENST00000568092 3511 ntBASIC4.13□□□□□ -1.75
GFRA1P56159 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
GFRA1P56159 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
GFRA1P56159 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
GFRA1P56159 SALL4P2-201ENST00000423288 2910 ntBASIC4.13□□□□□ -1.75
GFRA1P56159 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
GFRA1P56159 AC107068.1-201ENST00000563286 4218 ntBASIC4.13□□□□□ -1.75
GFRA1P56159 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.13□□□□□ -1.75
GFRA1P56159 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.13□□□□□ -1.75
GFRA1P56159 Y_RNA.527-201ENST00000384573 102 ntBASIC4.13□□□□□ -1.75
GFRA1P56159 MIR493-201ENST00000385254 89 ntBASIC4.13□□□□□ -1.75
GFRA1P56159 PPIAP31-201ENST00000405422 495 ntBASIC4.13□□□□□ -1.75
GFRA1P56159 ELOCP19-201ENST00000411919 318 ntBASIC4.13□□□□□ -1.75
GFRA1P56159 AC011933.1-201ENST00000413334 321 ntBASIC4.13□□□□□ -1.75
GFRA1P56159 SNORD56-201ENST00000413522 71 ntBASIC4.13□□□□□ -1.75
GFRA1P56159 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.13□□□□□ -1.75
GFRA1P56159 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.13□□□□□ -1.75
GFRA1P56159 BX276092.3-201ENST00000424182 230 ntBASIC4.13□□□□□ -1.75
GFRA1P56159 AC006946.1-201ENST00000429106 328 ntBASIC4.13□□□□□ -1.75
GFRA1P56159 AL158071.1-201ENST00000430315 461 ntBASIC4.13□□□□□ -1.75
GFRA1P56159 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.13□□□□□ -1.75
GFRA1P56159 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.13□□□□□ -1.75
GFRA1P56159 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.13□□□□□ -1.75
GFRA1P56159 AL078601.1-201ENST00000444542 271 ntBASIC4.13□□□□□ -1.75
GFRA1P56159 U8.21-201ENST00000459536 136 ntBASIC4.13□□□□□ -1.75
GFRA1P56159 AC139453.3-201ENST00000493276 369 ntBASIC4.13□□□□□ -1.75
GFRA1P56159 RNU6-572P-201ENST00000516724 80 ntBASIC4.13□□□□□ -1.75
GFRA1P56159 RAB9BP1-201ENST00000519581 626 ntBASIC4.13□□□□□ -1.75
GFRA1P56159 AP000827.1-201ENST00000527814 258 ntBASIC4.13□□□□□ -1.75
GFRA1P56159 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.13□□□□□ -1.75
GFRA1P56159 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC4.13□□□□□ -1.75
GFRA1P56159 SUB1P3-201ENST00000564581 315 ntBASIC4.13□□□□□ -1.75
GFRA1P56159 AC015912.2-201ENST00000571053 181 ntBASIC4.13□□□□□ -1.75
GFRA1P56159 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.13□□□□□ -1.75
GFRA1P56159 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.13□□□□□ -1.75
GFRA1P56159 RN7SL435P-201ENST00000584418 282 ntBASIC4.13□□□□□ -1.75
GFRA1P56159 AC092447.9-201ENST00000603395 144 ntBASIC4.13□□□□□ -1.75
GFRA1P56159 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.13□□□□□ -1.75
GFRA1P56159 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
GFRA1P56159 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.13□□□□□ -1.75
GFRA1P56159 AC010300.1-201ENST00000600671 5134 ntBASIC4.13□□□□□ -1.75
GFRA1P56159 AC005592.1-201ENST00000566527 1640 ntBASIC4.13□□□□□ -1.75
GFRA1P56159 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
GFRA1P56159 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
GFRA1P56159 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
GFRA1P56159 RAD17P1-201ENST00000418130 2042 ntBASIC4.12□□□□□ -1.75
GFRA1P56159 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
GFRA1P56159 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
GFRA1P56159 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.12□□□□□ -1.75
GFRA1P56159 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
GFRA1P56159 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.12□□□□□ -1.75
GFRA1P56159 RPL9P7-201ENST00000330965 580 ntBASIC4.12□□□□□ -1.75
GFRA1P56159 MIR659-201ENST00000384963 97 ntBASIC4.12□□□□□ -1.75
GFRA1P56159 MIR141-201ENST00000384975 95 ntBASIC4.12□□□□□ -1.75
GFRA1P56159 RNU6-1197P-201ENST00000391183 107 ntBASIC4.12□□□□□ -1.75
GFRA1P56159 AL592291.1-201ENST00000403830 352 ntBASIC4.12□□□□□ -1.75
GFRA1P56159 RN7SKP177-201ENST00000410567 355 ntBASIC4.12□□□□□ -1.75
GFRA1P56159 Y_RNA.605-201ENST00000410577 105 ntBASIC4.12□□□□□ -1.75
GFRA1P56159 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.12□□□□□ -1.75
GFRA1P56159 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.12□□□□□ -1.75
GFRA1P56159 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.12□□□□□ -1.75
GFRA1P56159 SNRPEP9-201ENST00000436794 238 ntBASIC4.12□□□□□ -1.75
GFRA1P56159 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.12□□□□□ -1.75
GFRA1P56159 AL513043.1-201ENST00000439124 535 ntBASIC4.12□□□□□ -1.75
GFRA1P56159 AC009220.1-201ENST00000451614 275 ntBASIC4.12□□□□□ -1.75
GFRA1P56159 RPL23AP24-201ENST00000458203 385 ntBASIC4.12□□□□□ -1.75
GFRA1P56159 RPL9P9-202ENST00000466501 579 ntBASIC4.12□□□□□ -1.75
GFRA1P56159 AC133134.1-201ENST00000466800 359 ntBASIC4.12□□□□□ -1.75
GFRA1P56159 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.12□□□□□ -1.75
GFRA1P56159 AC128713.1-201ENST00000471495 306 ntBASIC4.12□□□□□ -1.75
GFRA1P56159 RPL17P19-201ENST00000489069 552 ntBASIC4.12□□□□□ -1.75
GFRA1P56159 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.12□□□□□ -1.75
GFRA1P56159 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.12□□□□□ -1.75
GFRA1P56159 OR51K1P-201ENST00000510214 950 ntBASIC4.12□□□□□ -1.75
GFRA1P56159 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.12□□□□□ -1.75
GFRA1P56159 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.12□□□□□ -1.75
GFRA1P56159 RNA5SP468-201ENST00000516782 93 ntBASIC4.12□□□□□ -1.75
GFRA1P56159 AC109479.2-201ENST00000517842 174 ntBASIC4.12□□□□□ -1.75
GFRA1P56159 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.12□□□□□ -1.75
GFRA1P56159 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.12□□□□□ -1.75
GFRA1P56159 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
GFRA1P56159 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.12□□□□□ -1.75
GFRA1P56159 AC009314.1-201ENST00000603871 304 ntBASIC4.12□□□□□ -1.75
GFRA1P56159 AC136601.2-201ENST00000604356 474 ntBASIC4.12□□□□□ -1.75
GFRA1P56159 MIR3976-201ENST00000606807 139 ntBASIC4.12□□□□□ -1.75
GFRA1P56159 AC006023.2-201ENST00000609916 167 ntBASIC4.12□□□□□ -1.75
GFRA1P56159 AC004852.3-201ENST00000614131 326 ntBASIC4.12□□□□□ -1.75
GFRA1P56159 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms