Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.59□□□□□ -2.16
NUP98P52948 GAS5-AS1-201ENST00000602767 694 ntBASIC1.59□□□□□ -2.16
NUP98P52948 AL355877.2-201ENST00000603670 358 ntBASIC1.59□□□□□ -2.16
NUP98P52948 AC013553.2-201ENST00000604244 589 ntBASIC1.59□□□□□ -2.16
NUP98P52948 OR10AB1P-201ENST00000609613 938 ntBASIC1.59□□□□□ -2.16
NUP98P52948 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.59□□□□□ -2.16
NUP98P52948 OR4G1P-203ENST00000641984 1631 ntBASIC1.58□□□□□ -2.16
NUP98P52948 MTCO1P4-201ENST00000520516 1409 ntBASIC1.58□□□□□ -2.16
NUP98P52948 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.58□□□□□ -2.16
NUP98P52948 SNORA40.6-201ENST00000391153 128 ntBASIC1.58□□□□□ -2.16
NUP98P52948 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
NUP98P52948 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.58□□□□□ -2.16
NUP98P52948 USP12PX-201ENST00000432383 1057 ntBASIC1.58□□□□□ -2.16
NUP98P52948 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.58□□□□□ -2.16
NUP98P52948 RAC1P7-201ENST00000445367 377 ntBASIC1.58□□□□□ -2.16
NUP98P52948 AC093801.2-201ENST00000503966 1050 ntBASIC1.58□□□□□ -2.16
NUP98P52948 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.58□□□□□ -2.16
NUP98P52948 AC084364.2-201ENST00000546924 395 ntBASIC1.58□□□□□ -2.16
NUP98P52948 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.58□□□□□ -2.16
NUP98P52948 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.58□□□□□ -2.16
NUP98P52948 AC068135.2-201ENST00000569293 1028 ntBASIC1.58□□□□□ -2.16
NUP98P52948 AC015688.2-201ENST00000584523 262 ntBASIC1.58□□□□□ -2.16
NUP98P52948 AC006213.4-201ENST00000616184 634 ntBASIC1.58□□□□□ -2.16
NUP98P52948 RMST_2.1-201ENST00000617263 136 ntBASIC1.58□□□□□ -2.16
NUP98P52948 AC011330.2-201ENST00000621680 635 ntBASIC1.58□□□□□ -2.16
NUP98P52948 AC091925.2-201ENST00000625059 256 ntBASIC1.58□□□□□ -2.16
NUP98P52948 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
NUP98P52948 AP000648.3-201ENST00000623539 4507 ntBASIC1.58□□□□□ -2.16
NUP98P52948 DDX10P1-201ENST00000448545 1933 ntBASIC1.57□□□□□ -2.16
NUP98P52948 Y_RNA.122-201ENST00000363331 96 ntBASIC1.57□□□□□ -2.16
NUP98P52948 AC016769.3-201ENST00000396562 315 ntBASIC1.57□□□□□ -2.16
NUP98P52948 AL513475.1-201ENST00000406602 315 ntBASIC1.57□□□□□ -2.16
NUP98P52948 UBE2V1P11-201ENST00000411559 285 ntBASIC1.57□□□□□ -2.16
NUP98P52948 IPO7P1-201ENST00000442031 636 ntBASIC1.57□□□□□ -2.16
NUP98P52948 MTCYBP3-201ENST00000445588 1137 ntBASIC1.57□□□□□ -2.16
NUP98P52948 AL136380.1-201ENST00000447970 162 ntBASIC1.57□□□□□ -2.16
NUP98P52948 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.57□□□□□ -2.16
NUP98P52948 Z82190.1-201ENST00000454534 490 ntBASIC1.57□□□□□ -2.16
NUP98P52948 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.57□□□□□ -2.16
NUP98P52948 AC092757.1-201ENST00000467293 467 ntBASIC1.57□□□□□ -2.16
NUP98P52948 KLRA1P-201ENST00000503499 986 ntBASIC1.57□□□□□ -2.16
NUP98P52948 AC022447.3-201ENST00000506865 495 ntBASIC1.57□□□□□ -2.16
NUP98P52948 RNU6-202P-201ENST00000515998 96 ntBASIC1.57□□□□□ -2.16
NUP98P52948 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
NUP98P52948 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.57□□□□□ -2.16
NUP98P52948 AC118942.1-201ENST00000529674 1035 ntBASIC1.57□□□□□ -2.16
NUP98P52948 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.57□□□□□ -2.16
NUP98P52948 BPTFP1-201ENST00000579209 492 ntBASIC1.57□□□□□ -2.16
NUP98P52948 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.57□□□□□ -2.16
NUP98P52948 AP005137.2-201ENST00000609238 400 ntBASIC1.57□□□□□ -2.16
NUP98P52948 CCT4P2-201ENST00000233836 1548 ntBASIC1.57□□□□□ -2.16
NUP98P52948 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
NUP98P52948 RNU1-93P-201ENST00000364704 169 ntBASIC1.56□□□□□ -2.16
NUP98P52948 SNORD114-22-201ENST00000365423 72 ntBASIC1.56□□□□□ -2.16
NUP98P52948 RNU6-1035P-201ENST00000384477 107 ntBASIC1.56□□□□□ -2.16
NUP98P52948 RNU2-15P-201ENST00000410692 191 ntBASIC1.56□□□□□ -2.16
NUP98P52948 AC099548.1-201ENST00000421443 426 ntBASIC1.56□□□□□ -2.16
NUP98P52948 PGBD4P3-201ENST00000440731 581 ntBASIC1.56□□□□□ -2.16
NUP98P52948 AC244505.5-201ENST00000443639 207 ntBASIC1.56□□□□□ -2.16
NUP98P52948 MTCO1P48-201ENST00000448024 1096 ntBASIC1.56□□□□□ -2.16
NUP98P52948 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
NUP98P52948 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC1.56□□□□□ -2.16
NUP98P52948 RNU7-23P-201ENST00000459465 62 ntBASIC1.56□□□□□ -2.16
NUP98P52948 BZW1P2-201ENST00000473537 826 ntBASIC1.56□□□□□ -2.16
NUP98P52948 OR9N1P-202ENST00000494289 481 ntBASIC1.56□□□□□ -2.16
NUP98P52948 RNU5A-7P-201ENST00000515979 116 ntBASIC1.56□□□□□ -2.16
NUP98P52948 RNU1-104P-201ENST00000517280 175 ntBASIC1.56□□□□□ -2.16
NUP98P52948 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.56□□□□□ -2.16
NUP98P52948 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.56□□□□□ -2.16
NUP98P52948 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.56□□□□□ -2.16
NUP98P52948 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.56□□□□□ -2.16
NUP98P52948 AL354943.1-201ENST00000572103 781 ntBASIC1.56□□□□□ -2.16
NUP98P52948 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.56□□□□□ -2.16
NUP98P52948 AL031176.1-201ENST00000604554 466 ntBASIC1.56□□□□□ -2.16
NUP98P52948 AL161423.1-201ENST00000613700 262 ntBASIC1.56□□□□□ -2.16
NUP98P52948 MIR1264-201ENST00000616374 69 ntBASIC1.56□□□□□ -2.16
NUP98P52948 AC090617.9-201ENST00000623751 147 ntBASIC1.56□□□□□ -2.16
NUP98P52948 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.56□□□□□ -2.16
NUP98P52948 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.56□□□□□ -2.16
NUP98P52948 AC009902.3-201ENST00000606235 2172 ntBASIC1.56□□□□□ -2.16
NUP98P52948 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.56□□□□□ -2.16
NUP98P52948 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
NUP98P52948 RNU6-1080P-201ENST00000383982 107 ntBASIC1.56□□□□□ -2.16
NUP98P52948 MIR325-201ENST00000385260 98 ntBASIC1.56□□□□□ -2.16
NUP98P52948 AL023807.1-201ENST00000407932 359 ntBASIC1.56□□□□□ -2.16
NUP98P52948 ANKRD26P4-201ENST00000455755 950 ntBASIC1.56□□□□□ -2.16
NUP98P52948 AC087343.1-201ENST00000477341 475 ntBASIC1.56□□□□□ -2.16
NUP98P52948 RNU5F-8P-201ENST00000515941 111 ntBASIC1.56□□□□□ -2.16
NUP98P52948 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.56□□□□□ -2.16
NUP98P52948 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.56□□□□□ -2.16
NUP98P52948 MIR6078-201ENST00000611069 100 ntBASIC1.56□□□□□ -2.16
NUP98P52948 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.56□□□□□ -2.16
NUP98P52948 AC006338.1-201ENST00000618453 749 ntBASIC1.56□□□□□ -2.16
NUP98P52948 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.56□□□□□ -2.16
NUP98P52948 AL356585.4-201ENST00000623078 1229 ntBASIC1.56□□□□□ -2.16
NUP98P52948 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.56□□□□□ -2.16
NUP98P52948 AP003399.1-201ENST00000637534 361 ntBASIC1.56□□□□□ -2.16
NUP98P52948 AP000560.1-201ENST00000624150 1937 ntBASIC1.55□□□□□ -2.16
NUP98P52948 MTND5P10-201ENST00000603719 1809 ntBASIC1.55□□□□□ -2.16
NUP98P52948 Y_RNA.224-201ENST00000364308 111 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms