Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.15□□□□□ -2.07
RFC3P40938 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.15□□□□□ -2.07
RFC3P40938 AC109809.1-201ENST00000619665 545 ntBASIC2.15□□□□□ -2.07
RFC3P40938 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.15□□□□□ -2.07
RFC3P40938 MIR1291-201ENST00000627649 87 ntBASIC2.15□□□□□ -2.07
RFC3P40938 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.15□□□□□ -2.07
RFC3P40938 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
RFC3P40938 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
RFC3P40938 AC009902.3-201ENST00000606235 2172 ntBASIC2.15□□□□□ -2.07
RFC3P40938 AC010329.5-201ENST00000623497 2174 ntBASIC2.15□□□□□ -2.07
RFC3P40938 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.14□□□□□ -2.07
RFC3P40938 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
RFC3P40938 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
RFC3P40938 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
RFC3P40938 RNU6-289P-201ENST00000364093 107 ntBASIC2.14□□□□□ -2.07
RFC3P40938 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
RFC3P40938 BTF3P7-201ENST00000407097 488 ntBASIC2.14□□□□□ -2.07
RFC3P40938 RNU6-1328P-201ENST00000410938 106 ntBASIC2.14□□□□□ -2.07
RFC3P40938 UBE2FP1-201ENST00000416536 447 ntBASIC2.14□□□□□ -2.07
RFC3P40938 SEPT2P1-201ENST00000419651 180 ntBASIC2.14□□□□□ -2.07
RFC3P40938 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.14□□□□□ -2.07
RFC3P40938 BPY2DP-201ENST00000422208 265 ntBASIC2.14□□□□□ -2.07
RFC3P40938 WARS2P1-201ENST00000429678 537 ntBASIC2.14□□□□□ -2.07
RFC3P40938 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.14□□□□□ -2.07
RFC3P40938 MTCO3P45-201ENST00000443036 613 ntBASIC2.14□□□□□ -2.07
RFC3P40938 FAM103A2P-201ENST00000444122 354 ntBASIC2.14□□□□□ -2.07
RFC3P40938 OSTCP8-201ENST00000445117 448 ntBASIC2.14□□□□□ -2.07
RFC3P40938 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.14□□□□□ -2.07
RFC3P40938 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.14□□□□□ -2.07
RFC3P40938 AC013267.1-201ENST00000458227 267 ntBASIC2.14□□□□□ -2.07
RFC3P40938 AC104982.1-201ENST00000478775 574 ntBASIC2.14□□□□□ -2.07
RFC3P40938 LINC00888-204ENST00000487386 421 ntBASIC2.14□□□□□ -2.07
RFC3P40938 AC079804.2-201ENST00000490376 200 ntBASIC2.14□□□□□ -2.07
RFC3P40938 RPS29P21-201ENST00000496272 170 ntBASIC2.14□□□□□ -2.07
RFC3P40938 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.14□□□□□ -2.07
RFC3P40938 YWHAEP4-201ENST00000505390 198 ntBASIC2.14□□□□□ -2.07
RFC3P40938 AC096571.1-202ENST00000506634 735 ntBASIC2.14□□□□□ -2.07
RFC3P40938 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.14□□□□□ -2.07
RFC3P40938 AC109445.1-201ENST00000512356 383 ntBASIC2.14□□□□□ -2.07
RFC3P40938 AC110760.3-202ENST00000515177 371 ntBASIC2.14□□□□□ -2.07
RFC3P40938 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.14□□□□□ -2.07
RFC3P40938 AC023538.1-201ENST00000534576 736 ntBASIC2.14□□□□□ -2.07
RFC3P40938 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.14□□□□□ -2.07
RFC3P40938 AC023824.2-201ENST00000566185 400 ntBASIC2.14□□□□□ -2.07
RFC3P40938 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.14□□□□□ -2.07
RFC3P40938 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.14□□□□□ -2.07
RFC3P40938 MIR4658-201ENST00000584344 65 ntBASIC2.14□□□□□ -2.07
RFC3P40938 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.14□□□□□ -2.07
RFC3P40938 AC245297.2-201ENST00000610119 565 ntBASIC2.14□□□□□ -2.07
RFC3P40938 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.14□□□□□ -2.07
RFC3P40938 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
RFC3P40938 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
RFC3P40938 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
RFC3P40938 RNU5E-10P-201ENST00000363506 118 ntBASIC2.13□□□□□ -2.07
RFC3P40938 RNU1-51P-201ENST00000365345 176 ntBASIC2.13□□□□□ -2.07
RFC3P40938 ERHP2-201ENST00000402323 299 ntBASIC2.13□□□□□ -2.07
RFC3P40938 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.13□□□□□ -2.07
RFC3P40938 AC107081.1-201ENST00000414975 361 ntBASIC2.13□□□□□ -2.07
RFC3P40938 AL139415.2-201ENST00000431968 163 ntBASIC2.13□□□□□ -2.07
RFC3P40938 SNRPEP9-201ENST00000436794 238 ntBASIC2.13□□□□□ -2.07
RFC3P40938 AC010095.1-201ENST00000443543 144 ntBASIC2.13□□□□□ -2.07
RFC3P40938 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.13□□□□□ -2.07
RFC3P40938 EEF1E1P1-201ENST00000446998 430 ntBASIC2.13□□□□□ -2.07
RFC3P40938 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.13□□□□□ -2.07
RFC3P40938 RNU7-26P-201ENST00000458980 63 ntBASIC2.13□□□□□ -2.07
RFC3P40938 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.13□□□□□ -2.07
RFC3P40938 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.13□□□□□ -2.07
RFC3P40938 RPS15AP36-201ENST00000492022 382 ntBASIC2.13□□□□□ -2.07
RFC3P40938 RPL23AP49-201ENST00000492925 468 ntBASIC2.13□□□□□ -2.07
RFC3P40938 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
RFC3P40938 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.13□□□□□ -2.07
RFC3P40938 RNA5SP290-201ENST00000517133 127 ntBASIC2.13□□□□□ -2.07
RFC3P40938 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.13□□□□□ -2.07
RFC3P40938 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.13□□□□□ -2.07
RFC3P40938 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.13□□□□□ -2.07
RFC3P40938 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.13□□□□□ -2.07
RFC3P40938 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.13□□□□□ -2.07
RFC3P40938 UBE2L4-201ENST00000587688 464 ntBASIC2.13□□□□□ -2.07
RFC3P40938 AP000403.1-201ENST00000603349 851 ntBASIC2.13□□□□□ -2.07
RFC3P40938 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.13□□□□□ -2.07
RFC3P40938 AC131235.4-201ENST00000609288 620 ntBASIC2.13□□□□□ -2.07
RFC3P40938 HMGB1P24-202ENST00000615653 685 ntBASIC2.13□□□□□ -2.07
RFC3P40938 AL158801.5-201ENST00000623123 465 ntBASIC2.13□□□□□ -2.07
RFC3P40938 AC013437.2-201ENST00000639587 677 ntBASIC2.13□□□□□ -2.07
RFC3P40938 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
RFC3P40938 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.13□□□□□ -2.07
RFC3P40938 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
RFC3P40938 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
RFC3P40938 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
RFC3P40938 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
RFC3P40938 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
RFC3P40938 RNU1-73P-201ENST00000383971 164 ntBASIC2.12□□□□□ -2.07
RFC3P40938 RNU6-1083P-201ENST00000384022 107 ntBASIC2.12□□□□□ -2.07
RFC3P40938 SNORA51.11-201ENST00000384442 131 ntBASIC2.12□□□□□ -2.07
RFC3P40938 SNORA41-201ENST00000384675 132 ntBASIC2.12□□□□□ -2.07
RFC3P40938 RNA5SP425-201ENST00000410336 112 ntBASIC2.12□□□□□ -2.07
RFC3P40938 RN7SKP223-201ENST00000410582 62 ntBASIC2.12□□□□□ -2.07
RFC3P40938 NDUFS5P4-201ENST00000412983 318 ntBASIC2.12□□□□□ -2.07
RFC3P40938 USP9YP26-201ENST00000421008 661 ntBASIC2.12□□□□□ -2.07
RFC3P40938 ELOCP14-201ENST00000428070 331 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms