Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VAMP1P23763 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.34□□□□□ -1.72
VAMP1P23763 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
VAMP1P23763 AC106871.1-201ENST00000568324 3102 ntBASIC4.34□□□□□ -1.72
VAMP1P23763 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.34□□□□□ -1.72
VAMP1P23763 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
VAMP1P23763 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
VAMP1P23763 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.33□□□□□ -1.72
VAMP1P23763 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.33□□□□□ -1.72
VAMP1P23763 AC068254.2-201ENST00000623938 3577 ntBASIC4.33□□□□□ -1.72
VAMP1P23763 AC010889.1-201ENST00000566193 2666 ntBASIC4.33□□□□□ -1.72
VAMP1P23763 ZNF299P-201ENST00000406845 1804 ntBASIC4.33□□□□□ -1.72
VAMP1P23763 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.33□□□□□ -1.72
VAMP1P23763 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
VAMP1P23763 RNY1P16-201ENST00000363063 111 ntBASIC4.33□□□□□ -1.72
VAMP1P23763 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.33□□□□□ -1.72
VAMP1P23763 MIR544A-201ENST00000384855 91 ntBASIC4.33□□□□□ -1.72
VAMP1P23763 MTHFD2P2-201ENST00000407725 247 ntBASIC4.33□□□□□ -1.72
VAMP1P23763 U3.32-201ENST00000408116 212 ntBASIC4.33□□□□□ -1.72
VAMP1P23763 AP000275.1-201ENST00000411943 390 ntBASIC4.33□□□□□ -1.72
VAMP1P23763 AC009237.10-201ENST00000414112 510 ntBASIC4.33□□□□□ -1.72
VAMP1P23763 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC4.33□□□□□ -1.72
VAMP1P23763 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.33□□□□□ -1.72
VAMP1P23763 NUP35P1-201ENST00000422734 947 ntBASIC4.33□□□□□ -1.72
VAMP1P23763 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.33□□□□□ -1.72
VAMP1P23763 AL035666.1-201ENST00000446195 348 ntBASIC4.33□□□□□ -1.72
VAMP1P23763 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.33□□□□□ -1.72
VAMP1P23763 GZMAP1-201ENST00000503054 631 ntBASIC4.33□□□□□ -1.72
VAMP1P23763 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC4.33□□□□□ -1.72
VAMP1P23763 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC4.33□□□□□ -1.72
VAMP1P23763 AC007375.1-201ENST00000554513 578 ntBASIC4.33□□□□□ -1.72
VAMP1P23763 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.33□□□□□ -1.72
VAMP1P23763 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.33□□□□□ -1.72
VAMP1P23763 AC105137.2-201ENST00000569073 466 ntBASIC4.33□□□□□ -1.72
VAMP1P23763 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VAMP1P23763 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC4.33□□□□□ -1.72
VAMP1P23763 AC006157.1-201ENST00000611750 366 ntBASIC4.33□□□□□ -1.72
VAMP1P23763 PART1_1.1-201ENST00000611761 217 ntBASIC4.33□□□□□ -1.72
VAMP1P23763 MIR6721-201ENST00000617181 87 ntBASIC4.33□□□□□ -1.72
VAMP1P23763 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
VAMP1P23763 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VAMP1P23763 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
VAMP1P23763 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
VAMP1P23763 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VAMP1P23763 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.32□□□□□ -1.72
VAMP1P23763 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VAMP1P23763 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VAMP1P23763 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VAMP1P23763 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.32□□□□□ -1.72
VAMP1P23763 AC092435.4-201ENST00000623012 4159 ntBASIC4.32□□□□□ -1.72
VAMP1P23763 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VAMP1P23763 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VAMP1P23763 Y_RNA.132-201ENST00000363421 102 ntBASIC4.32□□□□□ -1.72
VAMP1P23763 U3.6-201ENST00000363622 211 ntBASIC4.32□□□□□ -1.72
VAMP1P23763 Y_RNA.314-201ENST00000365114 102 ntBASIC4.32□□□□□ -1.72
VAMP1P23763 Y_RNA.463-201ENST00000384271 102 ntBASIC4.32□□□□□ -1.72
VAMP1P23763 Y_RNA.533-201ENST00000384596 114 ntBASIC4.32□□□□□ -1.72
VAMP1P23763 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.32□□□□□ -1.72
VAMP1P23763 AC023141.4-201ENST00000412031 328 ntBASIC4.32□□□□□ -1.72
VAMP1P23763 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.32□□□□□ -1.72
VAMP1P23763 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.32□□□□□ -1.72
VAMP1P23763 RSL24D1P6-201ENST00000426934 401 ntBASIC4.32□□□□□ -1.72
VAMP1P23763 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.32□□□□□ -1.72
VAMP1P23763 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.32□□□□□ -1.72
VAMP1P23763 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.32□□□□□ -1.72
VAMP1P23763 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.32□□□□□ -1.72
VAMP1P23763 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.32□□□□□ -1.72
VAMP1P23763 AC068228.1-201ENST00000461723 211 ntBASIC4.32□□□□□ -1.72
VAMP1P23763 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.32□□□□□ -1.72
VAMP1P23763 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.32□□□□□ -1.72
VAMP1P23763 RNA5SP96-201ENST00000516041 107 ntBASIC4.32□□□□□ -1.72
VAMP1P23763 RNU6-615P-201ENST00000516065 106 ntBASIC4.32□□□□□ -1.72
VAMP1P23763 Y_RNA.667-201ENST00000516212 107 ntBASIC4.32□□□□□ -1.72
VAMP1P23763 SNORA70.20-201ENST00000516848 126 ntBASIC4.32□□□□□ -1.72
VAMP1P23763 Y_RNA.711-201ENST00000516993 102 ntBASIC4.32□□□□□ -1.72
VAMP1P23763 RN7SKP295-201ENST00000517264 153 ntBASIC4.32□□□□□ -1.72
VAMP1P23763 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.32□□□□□ -1.72
VAMP1P23763 MIR4644-201ENST00000579929 84 ntBASIC4.32□□□□□ -1.72
VAMP1P23763 AC012616.1-201ENST00000600294 197 ntBASIC4.32□□□□□ -1.72
VAMP1P23763 AC124916.2-201ENST00000604416 224 ntBASIC4.32□□□□□ -1.72
VAMP1P23763 AL359091.2-201ENST00000609303 556 ntBASIC4.32□□□□□ -1.72
VAMP1P23763 uc_338.29-201ENST00000615099 168 ntBASIC4.32□□□□□ -1.72
VAMP1P23763 AC090510.2-201ENST00000617465 629 ntBASIC4.32□□□□□ -1.72
VAMP1P23763 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.32□□□□□ -1.72
VAMP1P23763 CR392039.5-201ENST00000623201 510 ntBASIC4.32□□□□□ -1.72
VAMP1P23763 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.32□□□□□ -1.72
VAMP1P23763 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.32□□□□□ -1.72
VAMP1P23763 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VAMP1P23763 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VAMP1P23763 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
VAMP1P23763 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.32□□□□□ -1.72
VAMP1P23763 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VAMP1P23763 HAUS6P2-201ENST00000433254 2404 ntBASIC4.31□□□□□ -1.72
VAMP1P23763 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VAMP1P23763 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VAMP1P23763 COX6B1P3-201ENST00000312310 260 ntBASIC4.31□□□□□ -1.72
VAMP1P23763 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
VAMP1P23763 RNU6-1115P-201ENST00000362490 106 ntBASIC4.31□□□□□ -1.72
VAMP1P23763 Y_RNA.112-201ENST00000363250 102 ntBASIC4.31□□□□□ -1.72
VAMP1P23763 Y_RNA.216-201ENST00000364205 93 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms