Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 SNORD70.1-201ENST00000391007 85 ntBASIC3.54□□□□□ -1.84
TNFSF4P23510 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.54□□□□□ -1.84
TNFSF4P23510 AL022722.2-201ENST00000402519 180 ntBASIC3.54□□□□□ -1.84
TNFSF4P23510 RNA5SP118-201ENST00000410385 109 ntBASIC3.54□□□□□ -1.84
TNFSF4P23510 RNU6-373P-201ENST00000411247 98 ntBASIC3.54□□□□□ -1.84
TNFSF4P23510 OR9R1P-201ENST00000412200 877 ntBASIC3.54□□□□□ -1.84
TNFSF4P23510 HSPE1P1-201ENST00000421494 318 ntBASIC3.54□□□□□ -1.84
TNFSF4P23510 AC007560.1-201ENST00000426912 237 ntBASIC3.54□□□□□ -1.84
TNFSF4P23510 AL669831.1-202ENST00000428504 417 ntBASIC3.54□□□□□ -1.84
TNFSF4P23510 AL139415.2-201ENST00000431968 163 ntBASIC3.54□□□□□ -1.84
TNFSF4P23510 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.54□□□□□ -1.84
TNFSF4P23510 GTF2IP13-201ENST00000438487 386 ntBASIC3.54□□□□□ -1.84
TNFSF4P23510 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.54□□□□□ -1.84
TNFSF4P23510 MTND3P16-201ENST00000452205 344 ntBASIC3.54□□□□□ -1.84
TNFSF4P23510 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.54□□□□□ -1.84
TNFSF4P23510 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.54□□□□□ -1.84
TNFSF4P23510 MTCO3P38-201ENST00000468910 766 ntBASIC3.54□□□□□ -1.84
TNFSF4P23510 AC006499.6-201ENST00000511169 607 ntBASIC3.54□□□□□ -1.84
TNFSF4P23510 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.54□□□□□ -1.84
TNFSF4P23510 MIR2114-201ENST00000516645 80 ntBASIC3.54□□□□□ -1.84
TNFSF4P23510 SNORA31.21-201ENST00000517180 77 ntBASIC3.54□□□□□ -1.84
TNFSF4P23510 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.54□□□□□ -1.84
TNFSF4P23510 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.54□□□□□ -1.84
TNFSF4P23510 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.54□□□□□ -1.84
TNFSF4P23510 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
TNFSF4P23510 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.54□□□□□ -1.84
TNFSF4P23510 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.54□□□□□ -1.84
TNFSF4P23510 AC136624.4-201ENST00000573044 370 ntBASIC3.54□□□□□ -1.84
TNFSF4P23510 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.54□□□□□ -1.84
TNFSF4P23510 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.54□□□□□ -1.84
TNFSF4P23510 AP000907.4-201ENST00000604143 237 ntBASIC3.54□□□□□ -1.84
TNFSF4P23510 RBM11P1-201ENST00000604951 799 ntBASIC3.54□□□□□ -1.84
TNFSF4P23510 AC083809.1-201ENST00000615051 472 ntBASIC3.54□□□□□ -1.84
TNFSF4P23510 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
TNFSF4P23510 AP003122.6-201ENST00000623831 495 ntBASIC3.54□□□□□ -1.84
TNFSF4P23510 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.54□□□□□ -1.84
TNFSF4P23510 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TNFSF4P23510 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
TNFSF4P23510 AC004520.1-201ENST00000608362 1413 ntBASIC3.53□□□□□ -1.84
TNFSF4P23510 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TNFSF4P23510 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TNFSF4P23510 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.53□□□□□ -1.84
TNFSF4P23510 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TNFSF4P23510 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TNFSF4P23510 RN7SKP280-201ENST00000364196 304 ntBASIC3.53□□□□□ -1.84
TNFSF4P23510 Y_RNA.231-201ENST00000364358 102 ntBASIC3.53□□□□□ -1.84
TNFSF4P23510 RNU1-64P-201ENST00000365443 163 ntBASIC3.53□□□□□ -1.84
TNFSF4P23510 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
TNFSF4P23510 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
TNFSF4P23510 RNU6-38P-201ENST00000384085 107 ntBASIC3.53□□□□□ -1.84
TNFSF4P23510 RNU6-658P-201ENST00000384606 106 ntBASIC3.53□□□□□ -1.84
TNFSF4P23510 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
TNFSF4P23510 AL138878.1-201ENST00000405131 347 ntBASIC3.53□□□□□ -1.84
TNFSF4P23510 AL353621.1-201ENST00000418219 243 ntBASIC3.53□□□□□ -1.84
TNFSF4P23510 AL158071.1-201ENST00000430315 461 ntBASIC3.53□□□□□ -1.84
TNFSF4P23510 MRPS10P2-201ENST00000431226 381 ntBASIC3.53□□□□□ -1.84
TNFSF4P23510 AC073063.1-201ENST00000434352 607 ntBASIC3.53□□□□□ -1.84
TNFSF4P23510 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.53□□□□□ -1.84
TNFSF4P23510 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.53□□□□□ -1.84
TNFSF4P23510 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.53□□□□□ -1.84
TNFSF4P23510 RNU6-333P-201ENST00000459117 107 ntBASIC3.53□□□□□ -1.84
TNFSF4P23510 RPS7P7-201ENST00000463499 571 ntBASIC3.53□□□□□ -1.84
TNFSF4P23510 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.53□□□□□ -1.84
TNFSF4P23510 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.53□□□□□ -1.84
TNFSF4P23510 RPS27AP10-201ENST00000496103 208 ntBASIC3.53□□□□□ -1.84
TNFSF4P23510 FAM92A1P2-202ENST00000504766 877 ntBASIC3.53□□□□□ -1.84
TNFSF4P23510 AC017037.1-201ENST00000508460 471 ntBASIC3.53□□□□□ -1.84
TNFSF4P23510 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.53□□□□□ -1.84
TNFSF4P23510 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TNFSF4P23510 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TNFSF4P23510 AL117351.2-201ENST00000513571 157 ntBASIC3.53□□□□□ -1.84
TNFSF4P23510 IGLV3-26-201ENST00000520756 302 ntBASIC3.53□□□□□ -1.84
TNFSF4P23510 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.53□□□□□ -1.84
TNFSF4P23510 CYCSP29-201ENST00000533731 318 ntBASIC3.53□□□□□ -1.84
TNFSF4P23510 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.53□□□□□ -1.84
TNFSF4P23510 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.53□□□□□ -1.84
TNFSF4P23510 BNIP3P6-201ENST00000549284 499 ntBASIC3.53□□□□□ -1.84
TNFSF4P23510 TRAV37-201ENST00000553906 342 ntBASIC3.53□□□□□ -1.84
TNFSF4P23510 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.53□□□□□ -1.84
TNFSF4P23510 MTCO3P23-201ENST00000561363 289 ntBASIC3.53□□□□□ -1.84
TNFSF4P23510 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.53□□□□□ -1.84
TNFSF4P23510 AL645944.1-201ENST00000603857 493 ntBASIC3.53□□□□□ -1.84
TNFSF4P23510 MTND4LP5-201ENST00000605152 292 ntBASIC3.53□□□□□ -1.84
TNFSF4P23510 RNU4-89P-201ENST00000607443 133 ntBASIC3.53□□□□□ -1.84
TNFSF4P23510 AC022418.1-201ENST00000624118 445 ntBASIC3.53□□□□□ -1.84
TNFSF4P23510 AC112484.5-201ENST00000624189 228 ntBASIC3.53□□□□□ -1.84
TNFSF4P23510 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.53□□□□□ -1.84
TNFSF4P23510 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
TNFSF4P23510 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TNFSF4P23510 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.52□□□□□ -1.85
TNFSF4P23510 GABRG2-229ENST00000641017 3628 ntBASIC3.52□□□□□ -1.85
TNFSF4P23510 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
TNFSF4P23510 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TNFSF4P23510 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TNFSF4P23510 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
TNFSF4P23510 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
TNFSF4P23510 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TNFSF4P23510 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TNFSF4P23510 RNU6-82P-201ENST00000363970 107 ntBASIC3.52□□□□□ -1.85
TNFSF4P23510 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms