Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AP001804.3-201ENST00000525146 880 ntBASIC1.72□□□□□ -2.13
COL11A1P12107 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.72□□□□□ -2.13
COL11A1P12107 NBEAP1-201ENST00000554452 979 ntBASIC1.72□□□□□ -2.13
COL11A1P12107 AC074051.3-201ENST00000570238 358 ntBASIC1.72□□□□□ -2.13
COL11A1P12107 AL445435.1-201ENST00000604232 665 ntBASIC1.72□□□□□ -2.13
COL11A1P12107 AC010738.1-201ENST00000604970 987 ntBASIC1.72□□□□□ -2.13
COL11A1P12107 AC109454.4-201ENST00000623411 649 ntBASIC1.72□□□□□ -2.13
COL11A1P12107 AC087821.2-201ENST00000637086 450 ntBASIC1.72□□□□□ -2.13
COL11A1P12107 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
COL11A1P12107 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.71□□□□□ -2.14
COL11A1P12107 AC138915.1-201ENST00000565427 1685 ntBASIC1.71□□□□□ -2.14
COL11A1P12107 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.71□□□□□ -2.14
COL11A1P12107 RNU6-619P-201ENST00000365146 108 ntBASIC1.71□□□□□ -2.14
COL11A1P12107 Y_RNA.472-201ENST00000384322 102 ntBASIC1.71□□□□□ -2.14
COL11A1P12107 MIR517C-201ENST00000385103 95 ntBASIC1.71□□□□□ -2.14
COL11A1P12107 RNU6-298P-201ENST00000390888 96 ntBASIC1.71□□□□□ -2.14
COL11A1P12107 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
COL11A1P12107 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.71□□□□□ -2.14
COL11A1P12107 TMEM167AP1-201ENST00000423409 219 ntBASIC1.71□□□□□ -2.14
COL11A1P12107 AL354695.1-201ENST00000427935 228 ntBASIC1.71□□□□□ -2.14
COL11A1P12107 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC1.71□□□□□ -2.14
COL11A1P12107 PTGES3P1-201ENST00000439531 483 ntBASIC1.71□□□□□ -2.14
COL11A1P12107 AC004854.1-201ENST00000440356 349 ntBASIC1.71□□□□□ -2.14
COL11A1P12107 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.71□□□□□ -2.14
COL11A1P12107 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
COL11A1P12107 HMGN3P1-201ENST00000453847 193 ntBASIC1.71□□□□□ -2.14
COL11A1P12107 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
COL11A1P12107 BOLA3P3-201ENST00000505182 232 ntBASIC1.71□□□□□ -2.14
COL11A1P12107 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.71□□□□□ -2.14
COL11A1P12107 AC113420.1-201ENST00000507903 571 ntBASIC1.71□□□□□ -2.14
COL11A1P12107 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
COL11A1P12107 RNU6-276P-201ENST00000516114 96 ntBASIC1.71□□□□□ -2.14
COL11A1P12107 SNORA19.3-201ENST00000516165 130 ntBASIC1.71□□□□□ -2.14
COL11A1P12107 RNU1-92P-201ENST00000517017 135 ntBASIC1.71□□□□□ -2.14
COL11A1P12107 OR5AQ1P-201ENST00000527596 927 ntBASIC1.71□□□□□ -2.14
COL11A1P12107 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC1.71□□□□□ -2.14
COL11A1P12107 EEF1B2P4-201ENST00000551398 348 ntBASIC1.71□□□□□ -2.14
COL11A1P12107 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.71□□□□□ -2.14
COL11A1P12107 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
COL11A1P12107 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.71□□□□□ -2.14
COL11A1P12107 AP000240.1-201ENST00000609910 452 ntBASIC1.71□□□□□ -2.14
COL11A1P12107 AC016597.2-201ENST00000613256 341 ntBASIC1.71□□□□□ -2.14
COL11A1P12107 AC123767.1-202ENST00000620407 817 ntBASIC1.71□□□□□ -2.14
COL11A1P12107 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.71□□□□□ -2.14
COL11A1P12107 AL512506.2-201ENST00000624472 458 ntBASIC1.71□□□□□ -2.14
COL11A1P12107 MTND5P35-201ENST00000557537 1720 ntBASIC1.71□□□□□ -2.14
COL11A1P12107 AC006026.1-201ENST00000444025 1803 ntBASIC1.71□□□□□ -2.14
COL11A1P12107 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
COL11A1P12107 SGO1P1-201ENST00000603525 1447 ntBASIC1.71□□□□□ -2.14
COL11A1P12107 TMSB4XP8-201ENST00000402089 135 ntBASIC1.7□□□□□ -2.14
COL11A1P12107 RNA5SP56-201ENST00000410277 118 ntBASIC1.7□□□□□ -2.14
COL11A1P12107 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.7□□□□□ -2.14
COL11A1P12107 TMSB4XP6-201ENST00000415187 135 ntBASIC1.7□□□□□ -2.14
COL11A1P12107 TMSB4XP1-201ENST00000424567 135 ntBASIC1.7□□□□□ -2.14
COL11A1P12107 RAC1P8-201ENST00000427086 527 ntBASIC1.7□□□□□ -2.14
COL11A1P12107 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
COL11A1P12107 AL050341.1-201ENST00000447743 313 ntBASIC1.7□□□□□ -2.14
COL11A1P12107 AC015724.1-201ENST00000478577 156 ntBASIC1.7□□□□□ -2.14
COL11A1P12107 AC090096.1-201ENST00000489168 390 ntBASIC1.7□□□□□ -2.14
COL11A1P12107 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
COL11A1P12107 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
COL11A1P12107 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
COL11A1P12107 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.7□□□□□ -2.14
COL11A1P12107 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
COL11A1P12107 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.7□□□□□ -2.14
COL11A1P12107 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.7□□□□□ -2.14
COL11A1P12107 ERHP1-201ENST00000523006 310 ntBASIC1.7□□□□□ -2.14
COL11A1P12107 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.7□□□□□ -2.14
COL11A1P12107 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC1.7□□□□□ -2.14
COL11A1P12107 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.7□□□□□ -2.14
COL11A1P12107 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.7□□□□□ -2.14
COL11A1P12107 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.7□□□□□ -2.14
COL11A1P12107 MIR4666A-201ENST00000580160 79 ntBASIC1.7□□□□□ -2.14
COL11A1P12107 BNIP3P40-201ENST00000596017 556 ntBASIC1.7□□□□□ -2.14
COL11A1P12107 WISP1-OT1-201ENST00000602893 642 ntBASIC1.7□□□□□ -2.14
COL11A1P12107 AC012493.3-201ENST00000604494 112 ntBASIC1.7□□□□□ -2.14
COL11A1P12107 AC112220.2-201ENST00000605513 533 ntBASIC1.7□□□□□ -2.14
COL11A1P12107 AC034229.4-201ENST00000607861 441 ntBASIC1.7□□□□□ -2.14
COL11A1P12107 AC013468.1-201ENST00000608680 598 ntBASIC1.7□□□□□ -2.14
COL11A1P12107 AC018926.3-201ENST00000618841 406 ntBASIC1.7□□□□□ -2.14
COL11A1P12107 AL360181.4-201ENST00000621752 134 ntBASIC1.7□□□□□ -2.14
COL11A1P12107 AP000676.4-201ENST00000624659 623 ntBASIC1.7□□□□□ -2.14
COL11A1P12107 AC099654.9-201ENST00000637055 678 ntBASIC1.7□□□□□ -2.14
COL11A1P12107 MTND4P9-201ENST00000507819 1346 ntBASIC1.7□□□□□ -2.14
COL11A1P12107 AC233981.2-201ENST00000611524 1614 ntBASIC1.7□□□□□ -2.14
COL11A1P12107 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
COL11A1P12107 RNU5B-1-201ENST00000363286 116 ntBASIC1.7□□□□□ -2.14
COL11A1P12107 RNU6-1066P-201ENST00000363573 105 ntBASIC1.7□□□□□ -2.14
COL11A1P12107 Y_RNA.493-201ENST00000384422 102 ntBASIC1.7□□□□□ -2.14
COL11A1P12107 MIR627-201ENST00000384979 97 ntBASIC1.7□□□□□ -2.14
COL11A1P12107 RNU6-821P-201ENST00000390995 107 ntBASIC1.7□□□□□ -2.14
COL11A1P12107 RNA5SP252-201ENST00000391131 119 ntBASIC1.7□□□□□ -2.14
COL11A1P12107 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.7□□□□□ -2.14
COL11A1P12107 SUMO2P12-201ENST00000405924 140 ntBASIC1.7□□□□□ -2.14
COL11A1P12107 BTF3P8-201ENST00000414577 526 ntBASIC1.7□□□□□ -2.14
COL11A1P12107 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.7□□□□□ -2.14
COL11A1P12107 AC027644.1-201ENST00000419595 298 ntBASIC1.7□□□□□ -2.14
COL11A1P12107 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.7□□□□□ -2.14
COL11A1P12107 UBE2D3P2-201ENST00000424409 445 ntBASIC1.7□□□□□ -2.14
COL11A1P12107 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms