Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC005786.1-201ENST00000588553 154 ntBASIC1.2□□□□□ -2.22
TOP2AP11388 AL031274.2-201ENST00000599419 203 ntBASIC1.2□□□□□ -2.22
TOP2AP11388 CCT4P2-201ENST00000233836 1548 ntBASIC1.2□□□□□ -2.22
TOP2AP11388 RPL27AP8-201ENST00000424277 446 ntBASIC1.19□□□□□ -2.22
TOP2AP11388 RNU6-1218P-201ENST00000458990 108 ntBASIC1.19□□□□□ -2.22
TOP2AP11388 EIF4EP3-201ENST00000498782 656 ntBASIC1.19□□□□□ -2.22
TOP2AP11388 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.19□□□□□ -2.22
TOP2AP11388 AC105313.1-201ENST00000509121 353 ntBASIC1.19□□□□□ -2.22
TOP2AP11388 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC1.19□□□□□ -2.22
TOP2AP11388 AC090517.3-201ENST00000625170 141 ntBASIC1.19□□□□□ -2.22
TOP2AP11388 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.19□□□□□ -2.22
TOP2AP11388 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
TOP2AP11388 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
TOP2AP11388 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC1.18□□□□□ -2.22
TOP2AP11388 AL031183.1-201ENST00000457667 207 ntBASIC1.18□□□□□ -2.22
TOP2AP11388 AC027575.1-201ENST00000481064 460 ntBASIC1.18□□□□□ -2.22
TOP2AP11388 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
TOP2AP11388 RNU6-347P-201ENST00000516658 105 ntBASIC1.18□□□□□ -2.22
TOP2AP11388 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC1.18□□□□□ -2.22
TOP2AP11388 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.18□□□□□ -2.22
TOP2AP11388 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.18□□□□□ -2.22
TOP2AP11388 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
TOP2AP11388 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC1.17□□□□□ -2.22
TOP2AP11388 RNU6-942P-201ENST00000363002 107 ntBASIC1.17□□□□□ -2.22
TOP2AP11388 Y_RNA.251-201ENST00000364551 99 ntBASIC1.17□□□□□ -2.22
TOP2AP11388 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.17□□□□□ -2.22
TOP2AP11388 VN1R36P-201ENST00000414936 291 ntBASIC1.17□□□□□ -2.22
TOP2AP11388 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC1.17□□□□□ -2.22
TOP2AP11388 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.17□□□□□ -2.22
TOP2AP11388 RPS27P26-201ENST00000494583 239 ntBASIC1.17□□□□□ -2.22
TOP2AP11388 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
TOP2AP11388 AC010487.4-201ENST00000637027 61 ntBASIC1.17□□□□□ -2.22
TOP2AP11388 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
TOP2AP11388 RNA5SP257-201ENST00000363023 116 ntBASIC1.16□□□□□ -2.22
TOP2AP11388 RNA5SP62-201ENST00000363457 110 ntBASIC1.16□□□□□ -2.22
TOP2AP11388 AL512604.1-201ENST00000404812 257 ntBASIC1.16□□□□□ -2.22
TOP2AP11388 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.16□□□□□ -2.22
TOP2AP11388 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.16□□□□□ -2.22
TOP2AP11388 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.16□□□□□ -2.22
TOP2AP11388 AC012254.4-201ENST00000588843 273 ntBASIC1.16□□□□□ -2.22
TOP2AP11388 AP005137.2-201ENST00000609238 400 ntBASIC1.16□□□□□ -2.22
TOP2AP11388 MIR126-201ENST00000362291 85 ntBASIC1.15□□□□□ -2.22
TOP2AP11388 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.15□□□□□ -2.22
TOP2AP11388 MIR147B-201ENST00000390185 80 ntBASIC1.15□□□□□ -2.22
TOP2AP11388 FCF1P2-201ENST00000415284 583 ntBASIC1.15□□□□□ -2.22
TOP2AP11388 ARL2BPP3-201ENST00000421226 480 ntBASIC1.15□□□□□ -2.22
TOP2AP11388 MRPL35P3-201ENST00000421557 364 ntBASIC1.15□□□□□ -2.22
TOP2AP11388 AL606495.1-201ENST00000422100 813 ntBASIC1.15□□□□□ -2.22
TOP2AP11388 OSTCP8-201ENST00000445117 448 ntBASIC1.15□□□□□ -2.22
TOP2AP11388 AC104806.1-201ENST00000508720 308 ntBASIC1.15□□□□□ -2.22
TOP2AP11388 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.15□□□□□ -2.22
TOP2AP11388 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.15□□□□□ -2.22
TOP2AP11388 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.15□□□□□ -2.22
TOP2AP11388 AC013244.2-201ENST00000603396 103 ntBASIC1.15□□□□□ -2.22
TOP2AP11388 AC091925.1-201ENST00000623204 462 ntBASIC1.15□□□□□ -2.22
TOP2AP11388 AL118508.4-201ENST00000624142 1176 ntBASIC1.15□□□□□ -2.22
TOP2AP11388 MTND5P9-201ENST00000503854 1755 ntBASIC1.15□□□□□ -2.22
TOP2AP11388 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.15□□□□□ -2.22
TOP2AP11388 NACAP2-201ENST00000318548 624 ntBASIC1.15□□□□□ -2.23
TOP2AP11388 MIR330-201ENST00000362196 94 ntBASIC1.15□□□□□ -2.23
TOP2AP11388 AL691517.1-201ENST00000440833 1235 ntBASIC1.15□□□□□ -2.23
TOP2AP11388 AC022690.1-201ENST00000526681 550 ntBASIC1.15□□□□□ -2.23
TOP2AP11388 AC074029.2-201ENST00000551045 634 ntBASIC1.15□□□□□ -2.23
TOP2AP11388 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.15□□□□□ -2.23
TOP2AP11388 AC023824.2-201ENST00000566185 400 ntBASIC1.15□□□□□ -2.23
TOP2AP11388 MIR3117-201ENST00000584034 78 ntBASIC1.15□□□□□ -2.23
TOP2AP11388 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.15□□□□□ -2.23
TOP2AP11388 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.14□□□□□ -2.23
TOP2AP11388 SNORA23-201ENST00000365128 182 ntBASIC1.14□□□□□ -2.23
TOP2AP11388 RNU6-1235P-201ENST00000384559 107 ntBASIC1.14□□□□□ -2.23
TOP2AP11388 RNU6-498P-201ENST00000459468 107 ntBASIC1.14□□□□□ -2.23
TOP2AP11388 AC087879.1-201ENST00000474343 374 ntBASIC1.14□□□□□ -2.23
TOP2AP11388 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.14□□□□□ -2.23
TOP2AP11388 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.14□□□□□ -2.23
TOP2AP11388 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.14□□□□□ -2.23
TOP2AP11388 AC005498.1-201ENST00000592125 465 ntBASIC1.14□□□□□ -2.23
TOP2AP11388 AC245128.3-201ENST00000594721 748 ntBASIC1.14□□□□□ -2.23
TOP2AP11388 AL592148.2-201ENST00000612210 372 ntBASIC1.14□□□□□ -2.23
TOP2AP11388 AC008555.8-201ENST00000623602 2168 ntBASIC1.14□□□□□ -2.23
TOP2AP11388 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.13□□□□□ -2.23
TOP2AP11388 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.13□□□□□ -2.23
TOP2AP11388 AC093716.1-201ENST00000435923 377 ntBASIC1.13□□□□□ -2.23
TOP2AP11388 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.13□□□□□ -2.23
TOP2AP11388 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.13□□□□□ -2.23
TOP2AP11388 AC093770.1-201ENST00000511559 571 ntBASIC1.13□□□□□ -2.23
TOP2AP11388 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
TOP2AP11388 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.13□□□□□ -2.23
TOP2AP11388 BTF3L4P2-201ENST00000392798 346 ntBASIC1.12□□□□□ -2.23
TOP2AP11388 MIR934-201ENST00000401241 83 ntBASIC1.12□□□□□ -2.23
TOP2AP11388 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.12□□□□□ -2.23
TOP2AP11388 AC055731.1-201ENST00000474387 401 ntBASIC1.12□□□□□ -2.23
TOP2AP11388 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.12□□□□□ -2.23
TOP2AP11388 AC103851.1-201ENST00000506833 274 ntBASIC1.12□□□□□ -2.23
TOP2AP11388 AC067942.3-201ENST00000512025 362 ntBASIC1.12□□□□□ -2.23
TOP2AP11388 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.12□□□□□ -2.23
TOP2AP11388 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.12□□□□□ -2.23
TOP2AP11388 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.12□□□□□ -2.23
TOP2AP11388 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.12□□□□□ -2.23
TOP2AP11388 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC1.12□□□□□ -2.23
TOP2AP11388 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms