Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CSB-PGBD3P0DP91 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CSB-PGBD3P0DP91 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
CSB-PGBD3P0DP91 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CSB-PGBD3P0DP91 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
CSB-PGBD3P0DP91 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CSB-PGBD3P0DP91 MIR124-3-201ENST00000384866 87 ntBASIC5.84□□□□□ -1.47
CSB-PGBD3P0DP91 AL445529.1-201ENST00000398713 389 ntBASIC5.84□□□□□ -1.47
CSB-PGBD3P0DP91 CYCSP19-201ENST00000411715 316 ntBASIC5.84□□□□□ -1.47
CSB-PGBD3P0DP91 RPS20P14-201ENST00000412545 360 ntBASIC5.84□□□□□ -1.47
CSB-PGBD3P0DP91 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.84□□□□□ -1.47
CSB-PGBD3P0DP91 USP9YP30-201ENST00000430729 455 ntBASIC5.84□□□□□ -1.47
CSB-PGBD3P0DP91 AC011816.1-201ENST00000441346 546 ntBASIC5.84□□□□□ -1.47
CSB-PGBD3P0DP91 AL392103.1-201ENST00000447000 198 ntBASIC5.84□□□□□ -1.47
CSB-PGBD3P0DP91 FTH1P25-201ENST00000447665 469 ntBASIC5.84□□□□□ -1.47
CSB-PGBD3P0DP91 MTND4LP30-201ENST00000454092 297 ntBASIC5.84□□□□□ -1.47
CSB-PGBD3P0DP91 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.84□□□□□ -1.47
CSB-PGBD3P0DP91 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.84□□□□□ -1.47
CSB-PGBD3P0DP91 RNA5SP519-201ENST00000516480 119 ntBASIC5.84□□□□□ -1.47
CSB-PGBD3P0DP91 Y_RNA.689-201ENST00000516589 107 ntBASIC5.84□□□□□ -1.47
CSB-PGBD3P0DP91 RNU6-677P-201ENST00000516914 101 ntBASIC5.84□□□□□ -1.47
CSB-PGBD3P0DP91 RN7SKP60-201ENST00000516985 239 ntBASIC5.84□□□□□ -1.47
CSB-PGBD3P0DP91 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
CSB-PGBD3P0DP91 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.84□□□□□ -1.47
CSB-PGBD3P0DP91 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.84□□□□□ -1.47
CSB-PGBD3P0DP91 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
CSB-PGBD3P0DP91 AL359547.2-201ENST00000615810 418 ntBASIC5.84□□□□□ -1.47
CSB-PGBD3P0DP91 AC112200.1-201ENST00000625015 234 ntBASIC5.84□□□□□ -1.47
CSB-PGBD3P0DP91 Z73965.1-201ENST00000623412 2297 ntBASIC5.84□□□□□ -1.47
CSB-PGBD3P0DP91 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CSB-PGBD3P0DP91 MAPK10-320ENST00000641462 6696 ntBASIC5.84□□□□□ -1.48
CSB-PGBD3P0DP91 Y_RNA.26-201ENST00000362539 101 ntBASIC5.83□□□□□ -1.48
CSB-PGBD3P0DP91 RNU6-1059P-201ENST00000363752 98 ntBASIC5.83□□□□□ -1.48
CSB-PGBD3P0DP91 RNA5SP130-201ENST00000364431 114 ntBASIC5.83□□□□□ -1.48
CSB-PGBD3P0DP91 Y_RNA.376-201ENST00000365638 108 ntBASIC5.83□□□□□ -1.48
CSB-PGBD3P0DP91 RNU6-95P-201ENST00000384697 107 ntBASIC5.83□□□□□ -1.48
CSB-PGBD3P0DP91 MIR1302-6-201ENST00000408466 90 ntBASIC5.83□□□□□ -1.48
CSB-PGBD3P0DP91 Z99755.1-201ENST00000414048 380 ntBASIC5.83□□□□□ -1.48
CSB-PGBD3P0DP91 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.83□□□□□ -1.48
CSB-PGBD3P0DP91 CKS1BP6-201ENST00000424932 240 ntBASIC5.83□□□□□ -1.48
CSB-PGBD3P0DP91 COX6B1P7-201ENST00000430845 235 ntBASIC5.83□□□□□ -1.48
CSB-PGBD3P0DP91 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.83□□□□□ -1.48
CSB-PGBD3P0DP91 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.83□□□□□ -1.48
CSB-PGBD3P0DP91 RPS23P3-201ENST00000470993 430 ntBASIC5.83□□□□□ -1.48
CSB-PGBD3P0DP91 FO393415.2-201ENST00000480085 343 ntBASIC5.83□□□□□ -1.48
CSB-PGBD3P0DP91 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC5.83□□□□□ -1.48
CSB-PGBD3P0DP91 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.83□□□□□ -1.48
CSB-PGBD3P0DP91 Y_RNA.673-201ENST00000516306 88 ntBASIC5.83□□□□□ -1.48
CSB-PGBD3P0DP91 RNU6-1069P-201ENST00000516612 133 ntBASIC5.83□□□□□ -1.48
CSB-PGBD3P0DP91 RNA5SP143-201ENST00000516936 115 ntBASIC5.83□□□□□ -1.48
CSB-PGBD3P0DP91 Y_RNA.715-201ENST00000517082 110 ntBASIC5.83□□□□□ -1.48
CSB-PGBD3P0DP91 ERHP1-201ENST00000523006 310 ntBASIC5.83□□□□□ -1.48
CSB-PGBD3P0DP91 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CSB-PGBD3P0DP91 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.83□□□□□ -1.48
CSB-PGBD3P0DP91 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.83□□□□□ -1.48
CSB-PGBD3P0DP91 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.83□□□□□ -1.48
CSB-PGBD3P0DP91 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.83□□□□□ -1.48
CSB-PGBD3P0DP91 Z98751.3-201ENST00000604447 521 ntBASIC5.83□□□□□ -1.48
CSB-PGBD3P0DP91 AC096772.1-201ENST00000609146 564 ntBASIC5.83□□□□□ -1.48
CSB-PGBD3P0DP91 AC009570.1-201ENST00000609599 745 ntBASIC5.83□□□□□ -1.48
CSB-PGBD3P0DP91 AC103858.2-201ENST00000621471 543 ntBASIC5.83□□□□□ -1.48
CSB-PGBD3P0DP91 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CSB-PGBD3P0DP91 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CSB-PGBD3P0DP91 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.83□□□□□ -1.48
CSB-PGBD3P0DP91 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.83□□□□□ -1.48
CSB-PGBD3P0DP91 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
CSB-PGBD3P0DP91 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CSB-PGBD3P0DP91 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CSB-PGBD3P0DP91 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CSB-PGBD3P0DP91 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
CSB-PGBD3P0DP91 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CSB-PGBD3P0DP91 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CSB-PGBD3P0DP91 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
CSB-PGBD3P0DP91 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CSB-PGBD3P0DP91 Y_RNA.39-201ENST00000362620 98 ntBASIC5.82□□□□□ -1.48
CSB-PGBD3P0DP91 RNU6-774P-201ENST00000363238 107 ntBASIC5.82□□□□□ -1.48
CSB-PGBD3P0DP91 RNU6-200P-201ENST00000364743 107 ntBASIC5.82□□□□□ -1.48
CSB-PGBD3P0DP91 Y_RNA.562-201ENST00000384695 113 ntBASIC5.82□□□□□ -1.48
CSB-PGBD3P0DP91 RPL21P65-201ENST00000406094 466 ntBASIC5.82□□□□□ -1.48
CSB-PGBD3P0DP91 RNA5SP36-201ENST00000410197 133 ntBASIC5.82□□□□□ -1.48
CSB-PGBD3P0DP91 AC092809.3-201ENST00000415453 231 ntBASIC5.82□□□□□ -1.48
CSB-PGBD3P0DP91 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC5.82□□□□□ -1.48
CSB-PGBD3P0DP91 PIGPP3-201ENST00000425307 415 ntBASIC5.82□□□□□ -1.48
CSB-PGBD3P0DP91 RPS29P7-201ENST00000439662 171 ntBASIC5.82□□□□□ -1.48
CSB-PGBD3P0DP91 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.82□□□□□ -1.48
CSB-PGBD3P0DP91 SNORD5.1-201ENST00000458800 75 ntBASIC5.82□□□□□ -1.48
CSB-PGBD3P0DP91 snoU13.22-201ENST00000459428 104 ntBASIC5.82□□□□□ -1.48
CSB-PGBD3P0DP91 RN7SL812P-201ENST00000493791 279 ntBASIC5.82□□□□□ -1.48
CSB-PGBD3P0DP91 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.82□□□□□ -1.48
CSB-PGBD3P0DP91 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC5.82□□□□□ -1.48
CSB-PGBD3P0DP91 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.82□□□□□ -1.48
CSB-PGBD3P0DP91 GMPSP1-201ENST00000514075 579 ntBASIC5.82□□□□□ -1.48
CSB-PGBD3P0DP91 RN7SKP258-201ENST00000517151 304 ntBASIC5.82□□□□□ -1.48
CSB-PGBD3P0DP91 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.82□□□□□ -1.48
CSB-PGBD3P0DP91 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.82□□□□□ -1.48
CSB-PGBD3P0DP91 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.82□□□□□ -1.48
CSB-PGBD3P0DP91 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC5.82□□□□□ -1.48
CSB-PGBD3P0DP91 MTND4LP5-201ENST00000605152 292 ntBASIC5.82□□□□□ -1.48
CSB-PGBD3P0DP91 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.82□□□□□ -1.48
CSB-PGBD3P0DP91 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms