Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 FO393415.2-201ENST00000480085 343 ntBASIC1.3□□□□□ -2.2
CXCL1P09341 AC055855.1-201ENST00000489563 579 ntBASIC1.3□□□□□ -2.2
CXCL1P09341 AC106872.3-201ENST00000495104 446 ntBASIC1.3□□□□□ -2.2
CXCL1P09341 RPS27AP10-201ENST00000496103 208 ntBASIC1.3□□□□□ -2.2
CXCL1P09341 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.3□□□□□ -2.2
CXCL1P09341 AC017037.2-201ENST00000513850 890 ntBASIC1.3□□□□□ -2.2
CXCL1P09341 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.3□□□□□ -2.2
CXCL1P09341 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC1.3□□□□□ -2.2
CXCL1P09341 AC106782.4-201ENST00000568264 210 ntBASIC1.3□□□□□ -2.2
CXCL1P09341 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.3□□□□□ -2.2
CXCL1P09341 MIR4765-201ENST00000585007 77 ntBASIC1.3□□□□□ -2.2
CXCL1P09341 AL078605.1-201ENST00000603529 500 ntBASIC1.3□□□□□ -2.2
CXCL1P09341 RPAP2P1-201ENST00000603626 1168 ntBASIC1.3□□□□□ -2.2
CXCL1P09341 AL138963.2-201ENST00000605137 226 ntBASIC1.3□□□□□ -2.2
CXCL1P09341 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.3□□□□□ -2.2
CXCL1P09341 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.3□□□□□ -2.2
CXCL1P09341 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.3□□□□□ -2.2
CXCL1P09341 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CXCL1P09341 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.3□□□□□ -2.2
CXCL1P09341 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
CXCL1P09341 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.29□□□□□ -2.2
CXCL1P09341 RNA5SP276-201ENST00000362580 94 ntBASIC1.29□□□□□ -2.2
CXCL1P09341 RNA5SP387-201ENST00000364226 106 ntBASIC1.29□□□□□ -2.2
CXCL1P09341 RNU6-657P-201ENST00000383904 107 ntBASIC1.29□□□□□ -2.2
CXCL1P09341 RNU6-748P-201ENST00000384648 107 ntBASIC1.29□□□□□ -2.2
CXCL1P09341 SNORD65C-201ENST00000390962 71 ntBASIC1.29□□□□□ -2.2
CXCL1P09341 RNU2-28P-201ENST00000410457 189 ntBASIC1.29□□□□□ -2.2
CXCL1P09341 RNU2-63P-201ENST00000410792 194 ntBASIC1.29□□□□□ -2.2
CXCL1P09341 Z92545.1-201ENST00000411782 234 ntBASIC1.29□□□□□ -2.2
CXCL1P09341 AC008173.1-201ENST00000418901 264 ntBASIC1.29□□□□□ -2.2
CXCL1P09341 AC244636.1-201ENST00000421152 228 ntBASIC1.29□□□□□ -2.2
CXCL1P09341 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.29□□□□□ -2.2
CXCL1P09341 UBE2V2P3-201ENST00000433562 437 ntBASIC1.29□□□□□ -2.2
CXCL1P09341 AC091917.2-201ENST00000505002 744 ntBASIC1.29□□□□□ -2.2
CXCL1P09341 ANXA2P1-201ENST00000505539 926 ntBASIC1.29□□□□□ -2.2
CXCL1P09341 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CXCL1P09341 RNA5SP182-201ENST00000516064 82 ntBASIC1.29□□□□□ -2.2
CXCL1P09341 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC1.29□□□□□ -2.2
CXCL1P09341 AC024224.1-201ENST00000538284 609 ntBASIC1.29□□□□□ -2.2
CXCL1P09341 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.29□□□□□ -2.2
CXCL1P09341 NACAP3-201ENST00000552100 481 ntBASIC1.29□□□□□ -2.2
CXCL1P09341 BNIP3P33-201ENST00000598912 569 ntBASIC1.29□□□□□ -2.2
CXCL1P09341 AC068790.3-201ENST00000602988 553 ntBASIC1.29□□□□□ -2.2
CXCL1P09341 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.29□□□□□ -2.2
CXCL1P09341 AL136981.2-201ENST00000617319 734 ntBASIC1.29□□□□□ -2.2
CXCL1P09341 AC104820.1-201ENST00000624183 307 ntBASIC1.29□□□□□ -2.2
CXCL1P09341 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.29□□□□□ -2.2
CXCL1P09341 SNORA23-201ENST00000365128 182 ntBASIC1.28□□□□□ -2.2
CXCL1P09341 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.28□□□□□ -2.2
CXCL1P09341 MIR483-201ENST00000385070 76 ntBASIC1.28□□□□□ -2.2
CXCL1P09341 AC068050.1-201ENST00000394891 380 ntBASIC1.28□□□□□ -2.2
CXCL1P09341 AC244453.4-201ENST00000419150 388 ntBASIC1.28□□□□□ -2.2
CXCL1P09341 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.28□□□□□ -2.2
CXCL1P09341 DPH3P2-201ENST00000422618 250 ntBASIC1.28□□□□□ -2.2
CXCL1P09341 AC006946.1-201ENST00000429106 328 ntBASIC1.28□□□□□ -2.2
CXCL1P09341 AC007919.1-201ENST00000429380 217 ntBASIC1.28□□□□□ -2.2
CXCL1P09341 AL590233.1-201ENST00000430017 456 ntBASIC1.28□□□□□ -2.2
CXCL1P09341 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC1.28□□□□□ -2.2
CXCL1P09341 AC013828.1-201ENST00000481845 158 ntBASIC1.28□□□□□ -2.2
CXCL1P09341 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.28□□□□□ -2.2
CXCL1P09341 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.28□□□□□ -2.2
CXCL1P09341 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.28□□□□□ -2.2
CXCL1P09341 RNA5SP112-201ENST00000515937 99 ntBASIC1.28□□□□□ -2.2
CXCL1P09341 RNU6-528P-201ENST00000516926 100 ntBASIC1.28□□□□□ -2.2
CXCL1P09341 NRON-201ENST00000517270 370 ntBASIC1.28□□□□□ -2.2
CXCL1P09341 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.28□□□□□ -2.2
CXCL1P09341 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.28□□□□□ -2.2
CXCL1P09341 AC087276.1-201ENST00000529659 480 ntBASIC1.28□□□□□ -2.2
CXCL1P09341 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
CXCL1P09341 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.28□□□□□ -2.2
CXCL1P09341 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.28□□□□□ -2.2
CXCL1P09341 AC024619.4-201ENST00000580924 316 ntBASIC1.28□□□□□ -2.2
CXCL1P09341 AC091946.2-201ENST00000606105 291 ntBASIC1.28□□□□□ -2.2
CXCL1P09341 AC009233.1-201ENST00000616477 371 ntBASIC1.28□□□□□ -2.2
CXCL1P09341 AC008443.7-201ENST00000622195 246 ntBASIC1.28□□□□□ -2.2
CXCL1P09341 AC109454.4-201ENST00000623411 649 ntBASIC1.28□□□□□ -2.2
CXCL1P09341 LINC02211-204ENST00000642024 1070 ntBASIC1.28□□□□□ -2.2
CXCL1P09341 AL356473.1-201ENST00000406203 1408 ntBASIC1.28□□□□□ -2.2
CXCL1P09341 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.28□□□□□ -2.2
CXCL1P09341 AL359854.1-201ENST00000614203 1594 ntBASIC1.28□□□□□ -2.2
CXCL1P09341 SNORA67.3-201ENST00000384366 140 ntBASIC1.27□□□□□ -2.21
CXCL1P09341 SNORA8-201ENST00000384574 139 ntBASIC1.27□□□□□ -2.21
CXCL1P09341 MIR320A-201ENST00000385302 82 ntBASIC1.27□□□□□ -2.21
CXCL1P09341 SNORA40.19-201ENST00000390846 128 ntBASIC1.27□□□□□ -2.21
CXCL1P09341 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CXCL1P09341 AL356421.1-201ENST00000403255 413 ntBASIC1.27□□□□□ -2.21
CXCL1P09341 AL133264.1-201ENST00000407157 562 ntBASIC1.27□□□□□ -2.21
CXCL1P09341 MIR1294-201ENST00000408503 142 ntBASIC1.27□□□□□ -2.21
CXCL1P09341 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.27□□□□□ -2.21
CXCL1P09341 BOLA3P4-201ENST00000418151 400 ntBASIC1.27□□□□□ -2.21
CXCL1P09341 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC1.27□□□□□ -2.21
CXCL1P09341 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.27□□□□□ -2.21
CXCL1P09341 VN1R42P-201ENST00000424651 344 ntBASIC1.27□□□□□ -2.21
CXCL1P09341 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.27□□□□□ -2.21
CXCL1P09341 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.27□□□□□ -2.21
CXCL1P09341 FABP5P14-201ENST00000437273 393 ntBASIC1.27□□□□□ -2.21
CXCL1P09341 HSPE1P21-201ENST00000438283 308 ntBASIC1.27□□□□□ -2.21
CXCL1P09341 AC009238.1-201ENST00000442165 424 ntBASIC1.27□□□□□ -2.21
CXCL1P09341 AC009237.6-201ENST00000446969 424 ntBASIC1.27□□□□□ -2.21
CXCL1P09341 VN1R10P-201ENST00000447106 875 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms