Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RAPGEF3O95398 MIR4293-201ENST00000584305 78 ntBASIC4.82□□□□□ -1.64
RAPGEF3O95398 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.82□□□□□ -1.64
RAPGEF3O95398 AL034351.1-201ENST00000605288 668 ntBASIC4.82□□□□□ -1.64
RAPGEF3O95398 ATP1B3P1-201ENST00000605365 821 ntBASIC4.82□□□□□ -1.64
RAPGEF3O95398 AL136313.1-201ENST00000624804 202 ntBASIC4.82□□□□□ -1.64
RAPGEF3O95398 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RAPGEF3O95398 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RAPGEF3O95398 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.81□□□□□ -1.64
RAPGEF3O95398 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RAPGEF3O95398 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
RAPGEF3O95398 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RAPGEF3O95398 AC073343.1-201ENST00000328239 651 ntBASIC4.81□□□□□ -1.64
RAPGEF3O95398 SNORA72.1-201ENST00000363485 129 ntBASIC4.81□□□□□ -1.64
RAPGEF3O95398 RNU6-1284P-201ENST00000363701 100 ntBASIC4.81□□□□□ -1.64
RAPGEF3O95398 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
RAPGEF3O95398 SNORA69-201ENST00000383895 132 ntBASIC4.81□□□□□ -1.64
RAPGEF3O95398 MT-TL1-201ENST00000386347 75 ntBASIC4.81□□□□□ -1.64
RAPGEF3O95398 AC068050.1-201ENST00000394891 380 ntBASIC4.81□□□□□ -1.64
RAPGEF3O95398 AL136372.1-201ENST00000403060 228 ntBASIC4.81□□□□□ -1.64
RAPGEF3O95398 RAP1BP3-201ENST00000407180 549 ntBASIC4.81□□□□□ -1.64
RAPGEF3O95398 RNA5SP229-201ENST00000410809 99 ntBASIC4.81□□□□□ -1.64
RAPGEF3O95398 RNA5SP184-201ENST00000411071 108 ntBASIC4.81□□□□□ -1.64
RAPGEF3O95398 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.81□□□□□ -1.64
RAPGEF3O95398 AL162389.1-201ENST00000449233 177 ntBASIC4.81□□□□□ -1.64
RAPGEF3O95398 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.81□□□□□ -1.64
RAPGEF3O95398 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.81□□□□□ -1.64
RAPGEF3O95398 FGF7P3-201ENST00000454645 303 ntBASIC4.81□□□□□ -1.64
RAPGEF3O95398 RNU7-63P-201ENST00000459054 62 ntBASIC4.81□□□□□ -1.64
RAPGEF3O95398 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.81□□□□□ -1.64
RAPGEF3O95398 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.81□□□□□ -1.64
RAPGEF3O95398 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.81□□□□□ -1.64
RAPGEF3O95398 MTCYBP18-201ENST00000501056 747 ntBASIC4.81□□□□□ -1.64
RAPGEF3O95398 FAM60DP-201ENST00000524174 632 ntBASIC4.81□□□□□ -1.64
RAPGEF3O95398 AF235103.2-201ENST00000525753 346 ntBASIC4.81□□□□□ -1.64
RAPGEF3O95398 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.81□□□□□ -1.64
RAPGEF3O95398 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.81□□□□□ -1.64
RAPGEF3O95398 CBX3P5-201ENST00000552017 521 ntBASIC4.81□□□□□ -1.64
RAPGEF3O95398 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.81□□□□□ -1.64
RAPGEF3O95398 AC055876.1-202ENST00000567053 138 ntBASIC4.81□□□□□ -1.64
RAPGEF3O95398 AC015917.1-201ENST00000579654 510 ntBASIC4.81□□□□□ -1.64
RAPGEF3O95398 MIR4435-1-201ENST00000582552 80 ntBASIC4.81□□□□□ -1.64
RAPGEF3O95398 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.81□□□□□ -1.64
RAPGEF3O95398 TUG1_2.1-201ENST00000614234 87 ntBASIC4.81□□□□□ -1.64
RAPGEF3O95398 MIR3662-201ENST00000637030 95 ntBASIC4.81□□□□□ -1.64
RAPGEF3O95398 AC138649.5-201ENST00000637456 137 ntBASIC4.81□□□□□ -1.64
RAPGEF3O95398 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RAPGEF3O95398 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RAPGEF3O95398 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
RAPGEF3O95398 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RAPGEF3O95398 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.8□□□□□ -1.64
RAPGEF3O95398 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.8□□□□□ -1.64
RAPGEF3O95398 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RAPGEF3O95398 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.8□□□□□ -1.64
RAPGEF3O95398 Y_RNA.22-201ENST00000362492 102 ntBASIC4.8□□□□□ -1.64
RAPGEF3O95398 Y_RNA.367-201ENST00000365544 101 ntBASIC4.8□□□□□ -1.64
RAPGEF3O95398 MIR454-201ENST00000390180 115 ntBASIC4.8□□□□□ -1.64
RAPGEF3O95398 RNU6-876P-201ENST00000391295 104 ntBASIC4.8□□□□□ -1.64
RAPGEF3O95398 RNU2-43P-201ENST00000410306 190 ntBASIC4.8□□□□□ -1.64
RAPGEF3O95398 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.8□□□□□ -1.64
RAPGEF3O95398 UBE2FP1-201ENST00000416536 447 ntBASIC4.8□□□□□ -1.64
RAPGEF3O95398 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC4.8□□□□□ -1.64
RAPGEF3O95398 GTF2IP20-201ENST00000431663 360 ntBASIC4.8□□□□□ -1.64
RAPGEF3O95398 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.8□□□□□ -1.64
RAPGEF3O95398 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.8□□□□□ -1.64
RAPGEF3O95398 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.8□□□□□ -1.64
RAPGEF3O95398 TRBV12-1-201ENST00000479785 344 ntBASIC4.8□□□□□ -1.64
RAPGEF3O95398 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.8□□□□□ -1.64
RAPGEF3O95398 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.8□□□□□ -1.64
RAPGEF3O95398 AC105417.1-201ENST00000514691 285 ntBASIC4.8□□□□□ -1.64
RAPGEF3O95398 Y_RNA.702-201ENST00000516843 96 ntBASIC4.8□□□□□ -1.64
RAPGEF3O95398 HMGB1P41-201ENST00000520234 440 ntBASIC4.8□□□□□ -1.64
RAPGEF3O95398 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.8□□□□□ -1.64
RAPGEF3O95398 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.8□□□□□ -1.64
RAPGEF3O95398 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC4.8□□□□□ -1.64
RAPGEF3O95398 SNORD84-203ENST00000584275 78 ntBASIC4.8□□□□□ -1.64
RAPGEF3O95398 DISC2.1-201ENST00000612827 205 ntBASIC4.8□□□□□ -1.64
RAPGEF3O95398 SNHG22-203ENST00000617833 660 ntBASIC4.8□□□□□ -1.64
RAPGEF3O95398 AC022149.2-201ENST00000621061 203 ntBASIC4.8□□□□□ -1.64
RAPGEF3O95398 C2orf27A-204ENST00000623058 969 ntBASIC4.8□□□□□ -1.64
RAPGEF3O95398 AC009033.1-201ENST00000624279 431 ntBASIC4.8□□□□□ -1.64
RAPGEF3O95398 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RAPGEF3O95398 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RAPGEF3O95398 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RAPGEF3O95398 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RAPGEF3O95398 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.8□□□□□ -1.64
RAPGEF3O95398 MTND5P17-201ENST00000418405 1603 ntBASIC4.79□□□□□ -1.64
RAPGEF3O95398 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
RAPGEF3O95398 AC000403.1-201ENST00000613696 3585 ntBASIC4.79□□□□□ -1.64
RAPGEF3O95398 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RAPGEF3O95398 XIAPP3-201ENST00000312918 795 ntBASIC4.79□□□□□ -1.64
RAPGEF3O95398 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RAPGEF3O95398 RNU6-283P-201ENST00000364788 107 ntBASIC4.79□□□□□ -1.64
RAPGEF3O95398 RNA5SP167-201ENST00000365461 116 ntBASIC4.79□□□□□ -1.64
RAPGEF3O95398 RNU5E-6P-201ENST00000365574 115 ntBASIC4.79□□□□□ -1.64
RAPGEF3O95398 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RAPGEF3O95398 XGY1-201ENST00000381172 446 ntBASIC4.79□□□□□ -1.64
RAPGEF3O95398 RNU2-39P-201ENST00000410604 198 ntBASIC4.79□□□□□ -1.64
RAPGEF3O95398 RPL21P24-201ENST00000413752 448 ntBASIC4.79□□□□□ -1.64
RAPGEF3O95398 MTCO3P12-201ENST00000416718 547 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms