Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AC015922.2-201ENST00000435593 184 ntBASIC1.26□□□□□ -2.21
LTN1O94822 AC004383.1-201ENST00000438135 289 ntBASIC1.26□□□□□ -2.21
LTN1O94822 AL353689.1-201ENST00000438895 199 ntBASIC1.26□□□□□ -2.21
LTN1O94822 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.26□□□□□ -2.21
LTN1O94822 RPL23AP3-201ENST00000453844 468 ntBASIC1.26□□□□□ -2.21
LTN1O94822 RNU7-27P-201ENST00000459281 62 ntBASIC1.26□□□□□ -2.21
LTN1O94822 AC107032.1-201ENST00000485945 480 ntBASIC1.26□□□□□ -2.21
LTN1O94822 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.26□□□□□ -2.21
LTN1O94822 AC008127.2-201ENST00000549925 1075 ntBASIC1.26□□□□□ -2.21
LTN1O94822 AC025165.5-201ENST00000602802 578 ntBASIC1.26□□□□□ -2.21
LTN1O94822 AC096772.1-201ENST00000609146 564 ntBASIC1.26□□□□□ -2.21
LTN1O94822 AC091304.6-201ENST00000619761 202 ntBASIC1.26□□□□□ -2.21
LTN1O94822 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
LTN1O94822 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
LTN1O94822 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
LTN1O94822 RNU6-37P-201ENST00000362692 107 ntBASIC1.25□□□□□ -2.21
LTN1O94822 RNU6-11P-201ENST00000364234 107 ntBASIC1.25□□□□□ -2.21
LTN1O94822 RNA5SP450-201ENST00000411206 102 ntBASIC1.25□□□□□ -2.21
LTN1O94822 AL691517.1-201ENST00000440833 1235 ntBASIC1.25□□□□□ -2.21
LTN1O94822 AC005410.1-202ENST00000460347 485 ntBASIC1.25□□□□□ -2.21
LTN1O94822 PABPC1P3-201ENST00000469174 459 ntBASIC1.25□□□□□ -2.21
LTN1O94822 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.25□□□□□ -2.21
LTN1O94822 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.25□□□□□ -2.21
LTN1O94822 AC005034.5-201ENST00000604219 466 ntBASIC1.25□□□□□ -2.21
LTN1O94822 FAM71BP1-201ENST00000604431 523 ntBASIC1.25□□□□□ -2.21
LTN1O94822 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.25□□□□□ -2.21
LTN1O94822 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.25□□□□□ -2.21
LTN1O94822 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC1.25□□□□□ -2.21
LTN1O94822 AC010889.1-201ENST00000566193 2666 ntBASIC1.24□□□□□ -2.21
LTN1O94822 SNORD114-23-201ENST00000363536 72 ntBASIC1.24□□□□□ -2.21
LTN1O94822 RNU6-532P-201ENST00000384318 107 ntBASIC1.24□□□□□ -2.21
LTN1O94822 RNU6-1105P-201ENST00000384774 107 ntBASIC1.24□□□□□ -2.21
LTN1O94822 MIR147B-201ENST00000390185 80 ntBASIC1.24□□□□□ -2.21
LTN1O94822 RNU1-78P-201ENST00000391248 165 ntBASIC1.24□□□□□ -2.21
LTN1O94822 MIR1250-201ENST00000408098 113 ntBASIC1.24□□□□□ -2.21
LTN1O94822 RNU6-516P-201ENST00000411381 104 ntBASIC1.24□□□□□ -2.21
LTN1O94822 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC1.24□□□□□ -2.21
LTN1O94822 EBAG9P1-201ENST00000418955 543 ntBASIC1.24□□□□□ -2.21
LTN1O94822 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.24□□□□□ -2.21
LTN1O94822 AC118469.1-201ENST00000442943 488 ntBASIC1.24□□□□□ -2.21
LTN1O94822 NDUFB4P2-201ENST00000509515 391 ntBASIC1.24□□□□□ -2.21
LTN1O94822 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.24□□□□□ -2.21
LTN1O94822 MIR4529-201ENST00000578110 78 ntBASIC1.24□□□□□ -2.21
LTN1O94822 OR51AB1P-201ENST00000429046 620 ntBASIC1.24□□□□□ -2.21
LTN1O94822 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.24□□□□□ -2.21
LTN1O94822 MTND2P8-201ENST00000450555 1025 ntBASIC1.24□□□□□ -2.21
LTN1O94822 HSPE1P24-201ENST00000450782 238 ntBASIC1.24□□□□□ -2.21
LTN1O94822 AC010099.1-201ENST00000455434 375 ntBASIC1.24□□□□□ -2.21
LTN1O94822 SNORD97-201ENST00000459187 142 ntBASIC1.24□□□□□ -2.21
LTN1O94822 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.24□□□□□ -2.21
LTN1O94822 RN7SKP179-201ENST00000516126 217 ntBASIC1.24□□□□□ -2.21
LTN1O94822 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.24□□□□□ -2.21
LTN1O94822 AC074029.2-201ENST00000551045 634 ntBASIC1.24□□□□□ -2.21
LTN1O94822 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.24□□□□□ -2.21
LTN1O94822 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC1.24□□□□□ -2.21
LTN1O94822 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.24□□□□□ -2.21
LTN1O94822 AC007038.2-201ENST00000608095 740 ntBASIC1.24□□□□□ -2.21
LTN1O94822 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
LTN1O94822 AC008555.8-201ENST00000623602 2168 ntBASIC1.23□□□□□ -2.21
LTN1O94822 RNU6-19P-201ENST00000384718 107 ntBASIC1.23□□□□□ -2.21
LTN1O94822 U8.14-201ENST00000390843 143 ntBASIC1.23□□□□□ -2.21
LTN1O94822 RPS29P28-201ENST00000446439 141 ntBASIC1.23□□□□□ -2.21
LTN1O94822 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC1.23□□□□□ -2.21
LTN1O94822 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.23□□□□□ -2.21
LTN1O94822 DEFB108E-201ENST00000524692 240 ntBASIC1.23□□□□□ -2.21
LTN1O94822 AC025588.4-201ENST00000615802 908 ntBASIC1.23□□□□□ -2.21
LTN1O94822 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.23□□□□□ -2.21
LTN1O94822 AC010487.4-201ENST00000637027 61 ntBASIC1.23□□□□□ -2.21
LTN1O94822 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
LTN1O94822 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.22□□□□□ -2.21
LTN1O94822 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.22□□□□□ -2.21
LTN1O94822 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.22□□□□□ -2.21
LTN1O94822 MIR5571-201ENST00000577998 113 ntBASIC1.22□□□□□ -2.21
LTN1O94822 AC105245.1-201ENST00000581934 244 ntBASIC1.22□□□□□ -2.21
LTN1O94822 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.22□□□□□ -2.21
LTN1O94822 AP005137.2-201ENST00000609238 400 ntBASIC1.22□□□□□ -2.21
LTN1O94822 MIR6857-201ENST00000613267 93 ntBASIC1.22□□□□□ -2.21
LTN1O94822 AC080100.1-201ENST00000624239 5356 ntBASIC1.22□□□□□ -2.21
LTN1O94822 MIR216A-201ENST00000385063 110 ntBASIC1.21□□□□□ -2.22
LTN1O94822 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.21□□□□□ -2.22
LTN1O94822 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.21□□□□□ -2.22
LTN1O94822 COL6A4P2-205ENST00000509855 506 ntBASIC1.21□□□□□ -2.22
LTN1O94822 RNA5SP476-201ENST00000516613 103 ntBASIC1.21□□□□□ -2.22
LTN1O94822 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC1.21□□□□□ -2.22
LTN1O94822 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.21□□□□□ -2.22
LTN1O94822 AL355810.1-201ENST00000614629 552 ntBASIC1.21□□□□□ -2.22
LTN1O94822 RNU1-105P-201ENST00000363470 161 ntBASIC1.21□□□□□ -2.22
LTN1O94822 MIR934-201ENST00000401241 83 ntBASIC1.21□□□□□ -2.22
LTN1O94822 SDAD1P3-201ENST00000427380 333 ntBASIC1.21□□□□□ -2.22
LTN1O94822 Z77249.1-201ENST00000444622 1175 ntBASIC1.21□□□□□ -2.22
LTN1O94822 HMGN2P10-201ENST00000448085 265 ntBASIC1.21□□□□□ -2.22
LTN1O94822 MRPS33P3-201ENST00000513456 322 ntBASIC1.21□□□□□ -2.22
LTN1O94822 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC1.21□□□□□ -2.22
LTN1O94822 AC008269.2-201ENST00000561915 1105 ntBASIC1.21□□□□□ -2.22
LTN1O94822 FAM60BP-201ENST00000578364 658 ntBASIC1.21□□□□□ -2.22
LTN1O94822 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.21□□□□□ -2.22
LTN1O94822 PCNAP1-202ENST00000595299 752 ntBASIC1.21□□□□□ -2.22
LTN1O94822 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.2□□□□□ -2.22
LTN1O94822 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.2□□□□□ -2.22
LTN1O94822 MIR330-201ENST00000362196 94 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms