Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 RPL31P58-201ENST00000469001 379 ntBASIC0.98□□□□□ -2.25
SSSCA1O60232 SUMO1P1-201ENST00000497904 306 ntBASIC0.98□□□□□ -2.25
SSSCA1O60232 RNU6-362P-201ENST00000516736 90 ntBASIC0.98□□□□□ -2.25
SSSCA1O60232 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC0.98□□□□□ -2.25
SSSCA1O60232 DUXAP5-201ENST00000529668 529 ntBASIC0.98□□□□□ -2.25
SSSCA1O60232 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC0.98□□□□□ -2.25
SSSCA1O60232 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.98□□□□□ -2.25
SSSCA1O60232 AC067805.1-201ENST00000559344 470 ntBASIC0.98□□□□□ -2.25
SSSCA1O60232 AC233702.2-202ENST00000562547 291 ntBASIC0.98□□□□□ -2.25
SSSCA1O60232 AC022254.1-201ENST00000567857 235 ntBASIC0.98□□□□□ -2.25
SSSCA1O60232 AC074051.3-201ENST00000570238 358 ntBASIC0.98□□□□□ -2.25
SSSCA1O60232 AC024619.4-201ENST00000580924 316 ntBASIC0.98□□□□□ -2.25
SSSCA1O60232 AC103987.3-201ENST00000582071 292 ntBASIC0.98□□□□□ -2.25
SSSCA1O60232 AC015688.2-201ENST00000584523 262 ntBASIC0.98□□□□□ -2.25
SSSCA1O60232 AC018638.7-201ENST00000605836 1114 ntBASIC0.98□□□□□ -2.25
SSSCA1O60232 AL137246.1-201ENST00000607072 977 ntBASIC0.98□□□□□ -2.25
SSSCA1O60232 AL589743.7-201ENST00000612637 233 ntBASIC0.98□□□□□ -2.25
SSSCA1O60232 VN1R9P-201ENST00000614184 867 ntBASIC0.98□□□□□ -2.25
SSSCA1O60232 AP005212.4-201ENST00000614206 710 ntBASIC0.98□□□□□ -2.25
SSSCA1O60232 AC108479.2-201ENST00000617314 601 ntBASIC0.98□□□□□ -2.25
SSSCA1O60232 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC0.98□□□□□ -2.25
SSSCA1O60232 AC092192.1-201ENST00000633154 1018 ntBASIC0.98□□□□□ -2.25
SSSCA1O60232 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
SSSCA1O60232 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
SSSCA1O60232 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
SSSCA1O60232 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.97□□□□□ -2.25
SSSCA1O60232 RNU6-516P-201ENST00000411381 104 ntBASIC0.97□□□□□ -2.25
SSSCA1O60232 LINC01347-201ENST00000417964 355 ntBASIC0.97□□□□□ -2.25
SSSCA1O60232 BOLA3P4-201ENST00000418151 400 ntBASIC0.97□□□□□ -2.25
SSSCA1O60232 SFR1P2-201ENST00000421841 730 ntBASIC0.97□□□□□ -2.25
SSSCA1O60232 AL590383.1-201ENST00000428602 75 ntBASIC0.97□□□□□ -2.25
SSSCA1O60232 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC0.97□□□□□ -2.25
SSSCA1O60232 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.97□□□□□ -2.25
SSSCA1O60232 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC0.97□□□□□ -2.25
SSSCA1O60232 AC015724.1-201ENST00000478577 156 ntBASIC0.97□□□□□ -2.25
SSSCA1O60232 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.97□□□□□ -2.25
SSSCA1O60232 AC098799.1-201ENST00000504752 800 ntBASIC0.97□□□□□ -2.25
SSSCA1O60232 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC0.97□□□□□ -2.25
SSSCA1O60232 AC006390.1-201ENST00000508068 283 ntBASIC0.97□□□□□ -2.25
SSSCA1O60232 AP002748.2-201ENST00000528671 348 ntBASIC0.97□□□□□ -2.25
SSSCA1O60232 VBP1-203ENST00000535916 944 ntTSL 2 BASIC0.97□□□□□ -2.25
SSSCA1O60232 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC0.97□□□□□ -2.25
SSSCA1O60232 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC0.97□□□□□ -2.25
SSSCA1O60232 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC0.97□□□□□ -2.25
SSSCA1O60232 AL161670.1-201ENST00000554348 137 ntBASIC0.97□□□□□ -2.25
SSSCA1O60232 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC0.97□□□□□ -2.25
SSSCA1O60232 AC012435.1-202ENST00000568772 240 ntBASIC0.97□□□□□ -2.25
SSSCA1O60232 MTND4LP5-201ENST00000605152 292 ntBASIC0.97□□□□□ -2.25
SSSCA1O60232 AL354950.1-201ENST00000614150 568 ntBASIC0.97□□□□□ -2.25
SSSCA1O60232 AC008443.7-201ENST00000622195 246 ntBASIC0.97□□□□□ -2.25
SSSCA1O60232 AC091925.2-201ENST00000625059 256 ntBASIC0.97□□□□□ -2.25
SSSCA1O60232 AC026634.1-201ENST00000634369 198 ntBASIC0.97□□□□□ -2.25
SSSCA1O60232 ZNF663P-202ENST00000641770 1131 ntBASIC0.97□□□□□ -2.25
SSSCA1O60232 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC0.96□□□□□ -2.26
SSSCA1O60232 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.96□□□□□ -2.26
SSSCA1O60232 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.96□□□□□ -2.26
SSSCA1O60232 RNU6-1151P-201ENST00000384684 107 ntBASIC0.96□□□□□ -2.26
SSSCA1O60232 MIR649-201ENST00000384843 97 ntBASIC0.96□□□□□ -2.26
SSSCA1O60232 SNORA40.6-201ENST00000391153 128 ntBASIC0.96□□□□□ -2.26
SSSCA1O60232 SNORA26.9-201ENST00000391322 122 ntBASIC0.96□□□□□ -2.26
SSSCA1O60232 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.96□□□□□ -2.26
SSSCA1O60232 AL591704.2-201ENST00000421658 181 ntBASIC0.96□□□□□ -2.26
SSSCA1O60232 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC0.96□□□□□ -2.26
SSSCA1O60232 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.96□□□□□ -2.26
SSSCA1O60232 PTENP1-201ENST00000447117 1215 ntBASIC0.96□□□□□ -2.26
SSSCA1O60232 SUMO2P2-201ENST00000456482 255 ntBASIC0.96□□□□□ -2.26
SSSCA1O60232 SNORD97-201ENST00000459187 142 ntBASIC0.96□□□□□ -2.26
SSSCA1O60232 AC092757.1-201ENST00000467293 467 ntBASIC0.96□□□□□ -2.26
SSSCA1O60232 PABPC1P3-201ENST00000469174 459 ntBASIC0.96□□□□□ -2.26
SSSCA1O60232 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC0.96□□□□□ -2.26
SSSCA1O60232 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC0.96□□□□□ -2.26
SSSCA1O60232 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC0.96□□□□□ -2.26
SSSCA1O60232 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.96□□□□□ -2.26
SSSCA1O60232 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.96□□□□□ -2.26
SSSCA1O60232 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.96□□□□□ -2.26
SSSCA1O60232 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC0.96□□□□□ -2.26
SSSCA1O60232 MIR4513-201ENST00000581077 86 ntBASIC0.96□□□□□ -2.26
SSSCA1O60232 AP000403.1-201ENST00000603349 851 ntBASIC0.96□□□□□ -2.26
SSSCA1O60232 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.96□□□□□ -2.26
SSSCA1O60232 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC0.96□□□□□ -2.26
SSSCA1O60232 ZNF209P-201ENST00000593450 2304 ntBASIC0.96□□□□□ -2.26
SSSCA1O60232 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.95□□□□□ -2.26
SSSCA1O60232 RNU6-921P-201ENST00000384361 107 ntBASIC0.95□□□□□ -2.26
SSSCA1O60232 MIR518A2-201ENST00000384966 87 ntBASIC0.95□□□□□ -2.26
SSSCA1O60232 AL355615.1-201ENST00000406187 641 ntBASIC0.95□□□□□ -2.26
SSSCA1O60232 CYCSP49-201ENST00000420810 319 ntBASIC0.95□□□□□ -2.26
SSSCA1O60232 AC092648.1-201ENST00000425870 423 ntBASIC0.95□□□□□ -2.26
SSSCA1O60232 HMGB1P31-201ENST00000437242 427 ntBASIC0.95□□□□□ -2.26
SSSCA1O60232 AC092393.1-201ENST00000439625 742 ntBASIC0.95□□□□□ -2.26
SSSCA1O60232 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.95□□□□□ -2.26
SSSCA1O60232 AC116337.1-201ENST00000509680 687 ntBASIC0.95□□□□□ -2.26
SSSCA1O60232 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
SSSCA1O60232 MAL2-206ENST00000522187 547 ntTSL 4 BASIC0.95□□□□□ -2.26
SSSCA1O60232 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC0.95□□□□□ -2.26
SSSCA1O60232 RRN3P3-201ENST00000549207 578 ntBASIC0.95□□□□□ -2.26
SSSCA1O60232 DNAJC19P9-201ENST00000555084 351 ntBASIC0.95□□□□□ -2.26
SSSCA1O60232 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC0.95□□□□□ -2.26
SSSCA1O60232 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.95□□□□□ -2.26
SSSCA1O60232 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC0.95□□□□□ -2.26
SSSCA1O60232 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms