Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 AC008837.1-201ENST00000511513 412 ntBASIC1.63□□□□□ -2.15
SSNA1O43805 AC006499.2-201ENST00000513470 337 ntBASIC1.63□□□□□ -2.15
SSNA1O43805 SNORA4.4-201ENST00000515921 135 ntBASIC1.63□□□□□ -2.15
SSNA1O43805 RNA5SP148-201ENST00000516527 94 ntBASIC1.63□□□□□ -2.15
SSNA1O43805 RNA5SP137-201ENST00000516833 135 ntBASIC1.63□□□□□ -2.15
SSNA1O43805 RNA5SP165-201ENST00000517142 115 ntBASIC1.63□□□□□ -2.15
SSNA1O43805 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.63□□□□□ -2.15
SSNA1O43805 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.63□□□□□ -2.15
SSNA1O43805 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.63□□□□□ -2.15
SSNA1O43805 AL031274.2-201ENST00000599419 203 ntBASIC1.63□□□□□ -2.15
SSNA1O43805 MTCYBP22-201ENST00000603788 447 ntBASIC1.63□□□□□ -2.15
SSNA1O43805 AC005034.5-201ENST00000604219 466 ntBASIC1.63□□□□□ -2.15
SSNA1O43805 AL355297.2-201ENST00000604792 129 ntBASIC1.63□□□□□ -2.15
SSNA1O43805 AC004908.2-201ENST00000609090 574 ntBASIC1.63□□□□□ -2.15
SSNA1O43805 AC008759.3-201ENST00000613300 508 ntBASIC1.63□□□□□ -2.15
SSNA1O43805 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.63□□□□□ -2.15
SSNA1O43805 AC005296.1-201ENST00000616145 209 ntBASIC1.63□□□□□ -2.15
SSNA1O43805 AL445264.1-201ENST00000621719 171 ntBASIC1.63□□□□□ -2.15
SSNA1O43805 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
SSNA1O43805 MTCO1P4-201ENST00000520516 1409 ntBASIC1.63□□□□□ -2.15
SSNA1O43805 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SSNA1O43805 AP006437.1-201ENST00000641440 3685 ntBASIC1.62□□□□□ -2.15
SSNA1O43805 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
SSNA1O43805 RNU1-72P-201ENST00000362976 153 ntBASIC1.62□□□□□ -2.15
SSNA1O43805 RNU6-97P-201ENST00000363387 104 ntBASIC1.62□□□□□ -2.15
SSNA1O43805 RNU6-207P-201ENST00000384137 107 ntBASIC1.62□□□□□ -2.15
SSNA1O43805 RNU6-114P-201ENST00000384704 105 ntBASIC1.62□□□□□ -2.15
SSNA1O43805 RNU6-19P-201ENST00000384718 107 ntBASIC1.62□□□□□ -2.15
SSNA1O43805 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
SSNA1O43805 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.62□□□□□ -2.15
SSNA1O43805 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.62□□□□□ -2.15
SSNA1O43805 RPS24P7-201ENST00000416921 246 ntBASIC1.62□□□□□ -2.15
SSNA1O43805 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.62□□□□□ -2.15
SSNA1O43805 AC007435.1-201ENST00000421086 415 ntBASIC1.62□□□□□ -2.15
SSNA1O43805 AL445685.2-201ENST00000422551 342 ntBASIC1.62□□□□□ -2.15
SSNA1O43805 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC1.62□□□□□ -2.15
SSNA1O43805 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.62□□□□□ -2.15
SSNA1O43805 COX7BP2-201ENST00000437976 242 ntBASIC1.62□□□□□ -2.15
SSNA1O43805 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.62□□□□□ -2.15
SSNA1O43805 AC079776.3-201ENST00000450665 370 ntBASIC1.62□□□□□ -2.15
SSNA1O43805 AL353718.1-201ENST00000451028 517 ntBASIC1.62□□□□□ -2.15
SSNA1O43805 snoU109.1-201ENST00000459339 135 ntBASIC1.62□□□□□ -2.15
SSNA1O43805 AC005410.1-202ENST00000460347 485 ntBASIC1.62□□□□□ -2.15
SSNA1O43805 SAP18P1-201ENST00000512058 390 ntBASIC1.62□□□□□ -2.15
SSNA1O43805 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
SSNA1O43805 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.62□□□□□ -2.15
SSNA1O43805 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.62□□□□□ -2.15
SSNA1O43805 SLC2A13P1-201ENST00000531560 322 ntBASIC1.62□□□□□ -2.15
SSNA1O43805 OR5AL2P-201ENST00000532185 920 ntBASIC1.62□□□□□ -2.15
SSNA1O43805 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.62□□□□□ -2.15
SSNA1O43805 HIGD1AP17-201ENST00000554576 276 ntBASIC1.62□□□□□ -2.15
SSNA1O43805 AL121821.2-201ENST00000556081 394 ntBASIC1.62□□□□□ -2.15
SSNA1O43805 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.62□□□□□ -2.15
SSNA1O43805 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.62□□□□□ -2.15
SSNA1O43805 AL451007.1-201ENST00000595491 289 ntBASIC1.62□□□□□ -2.15
SSNA1O43805 AC243960.4-201ENST00000600532 288 ntBASIC1.62□□□□□ -2.15
SSNA1O43805 AC104763.2-201ENST00000604179 382 ntBASIC1.62□□□□□ -2.15
SSNA1O43805 AL445435.1-201ENST00000604232 665 ntBASIC1.62□□□□□ -2.15
SSNA1O43805 TUG1_2.1-201ENST00000614234 87 ntBASIC1.62□□□□□ -2.15
SSNA1O43805 AL109620.1-201ENST00000618738 1197 ntBASIC1.62□□□□□ -2.15
SSNA1O43805 AC009268.2-201ENST00000621925 457 ntBASIC1.62□□□□□ -2.15
SSNA1O43805 AC079416.3-201ENST00000624479 549 ntBASIC1.62□□□□□ -2.15
SSNA1O43805 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.61□□□□□ -2.15
SSNA1O43805 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC1.61□□□□□ -2.15
SSNA1O43805 SNORA16.1-201ENST00000364597 132 ntBASIC1.61□□□□□ -2.15
SSNA1O43805 XGY1-201ENST00000381172 446 ntBASIC1.61□□□□□ -2.15
SSNA1O43805 RNU6-1207P-201ENST00000384343 107 ntBASIC1.61□□□□□ -2.15
SSNA1O43805 RNU6-952P-201ENST00000391164 108 ntBASIC1.61□□□□□ -2.15
SSNA1O43805 RNU6-754P-201ENST00000391166 107 ntBASIC1.61□□□□□ -2.15
SSNA1O43805 MTND3P20-201ENST00000407663 186 ntBASIC1.61□□□□□ -2.15
SSNA1O43805 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.61□□□□□ -2.15
SSNA1O43805 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.61□□□□□ -2.15
SSNA1O43805 AL353729.1-201ENST00000425044 720 ntBASIC1.61□□□□□ -2.15
SSNA1O43805 PTGES3P4-201ENST00000426243 356 ntBASIC1.61□□□□□ -2.15
SSNA1O43805 AC092634.2-201ENST00000428146 1010 ntBASIC1.61□□□□□ -2.15
SSNA1O43805 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.61□□□□□ -2.15
SSNA1O43805 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.61□□□□□ -2.15
SSNA1O43805 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.61□□□□□ -2.15
SSNA1O43805 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.61□□□□□ -2.15
SSNA1O43805 NANOGP2-201ENST00000435391 727 ntBASIC1.61□□□□□ -2.15
SSNA1O43805 HSPE1P21-201ENST00000438283 308 ntBASIC1.61□□□□□ -2.15
SSNA1O43805 DNAJC19P4-201ENST00000440115 345 ntBASIC1.61□□□□□ -2.15
SSNA1O43805 MTND2P20-201ENST00000440805 661 ntBASIC1.61□□□□□ -2.15
SSNA1O43805 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SSNA1O43805 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.61□□□□□ -2.15
SSNA1O43805 RNU7-136P-201ENST00000458819 69 ntBASIC1.61□□□□□ -2.15
SSNA1O43805 AC068587.1-201ENST00000483613 781 ntBASIC1.61□□□□□ -2.15
SSNA1O43805 HMGB1P35-201ENST00000503360 598 ntBASIC1.61□□□□□ -2.15
SSNA1O43805 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SSNA1O43805 AC093281.2-201ENST00000510153 597 ntBASIC1.61□□□□□ -2.15
SSNA1O43805 AC026616.1-201ENST00000523157 525 ntBASIC1.61□□□□□ -2.15
SSNA1O43805 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SSNA1O43805 MIR5089-201ENST00000580047 84 ntBASIC1.61□□□□□ -2.15
SSNA1O43805 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SSNA1O43805 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.61□□□□□ -2.15
SSNA1O43805 AF038458.1-201ENST00000588406 262 ntBASIC1.61□□□□□ -2.15
SSNA1O43805 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC1.61□□□□□ -2.15
SSNA1O43805 BBIP1P1-201ENST00000602999 279 ntBASIC1.61□□□□□ -2.15
SSNA1O43805 AC069304.2-201ENST00000605154 435 ntBASIC1.61□□□□□ -2.15
SSNA1O43805 AC007038.2-201ENST00000608095 740 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms