Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 SNORA72.1-201ENST00000363485 129 ntBASIC3.39□□□□□ -1.87
LDB2O43679 SNORA23-201ENST00000365128 182 ntBASIC3.39□□□□□ -1.87
LDB2O43679 RNU6-1074P-201ENST00000383995 104 ntBASIC3.39□□□□□ -1.87
LDB2O43679 RNVU1-14-201ENST00000384770 164 ntBASIC3.39□□□□□ -1.87
LDB2O43679 MT-TL1-201ENST00000386347 75 ntBASIC3.39□□□□□ -1.87
LDB2O43679 RNA5SP118-201ENST00000410385 109 ntBASIC3.39□□□□□ -1.87
LDB2O43679 AC126124.2-201ENST00000413542 321 ntBASIC3.39□□□□□ -1.87
LDB2O43679 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.39□□□□□ -1.87
LDB2O43679 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.39□□□□□ -1.87
LDB2O43679 SDCBPP3-201ENST00000419629 891 ntBASIC3.39□□□□□ -1.87
LDB2O43679 RPS3AP12-201ENST00000443616 753 ntBASIC3.39□□□□□ -1.87
LDB2O43679 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.39□□□□□ -1.87
LDB2O43679 CACYBPP2-201ENST00000453625 678 ntBASIC3.39□□□□□ -1.87
LDB2O43679 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.39□□□□□ -1.87
LDB2O43679 RNU7-170P-201ENST00000459303 61 ntBASIC3.39□□□□□ -1.87
LDB2O43679 RPL21P10-201ENST00000463521 490 ntBASIC3.39□□□□□ -1.87
LDB2O43679 AC010401.1-201ENST00000463867 348 ntBASIC3.39□□□□□ -1.87
LDB2O43679 AC078785.3-201ENST00000476607 425 ntBASIC3.39□□□□□ -1.87
LDB2O43679 RPL7P47-201ENST00000497299 556 ntBASIC3.39□□□□□ -1.87
LDB2O43679 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.39□□□□□ -1.87
LDB2O43679 AC026427.2-201ENST00000506228 536 ntBASIC3.39□□□□□ -1.87
LDB2O43679 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.39□□□□□ -1.87
LDB2O43679 FCF1P8-201ENST00000510322 597 ntBASIC3.39□□□□□ -1.87
LDB2O43679 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.39□□□□□ -1.87
LDB2O43679 AC105417.1-201ENST00000514691 285 ntBASIC3.39□□□□□ -1.87
LDB2O43679 SNORA20.3-201ENST00000516880 132 ntBASIC3.39□□□□□ -1.87
LDB2O43679 RNU6-1092P-201ENST00000516955 87 ntBASIC3.39□□□□□ -1.87
LDB2O43679 AF235103.2-201ENST00000525753 346 ntBASIC3.39□□□□□ -1.87
LDB2O43679 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.39□□□□□ -1.87
LDB2O43679 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.39□□□□□ -1.87
LDB2O43679 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.39□□□□□ -1.87
LDB2O43679 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.39□□□□□ -1.87
LDB2O43679 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.39□□□□□ -1.87
LDB2O43679 AF038458.1-201ENST00000588406 262 ntBASIC3.39□□□□□ -1.87
LDB2O43679 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.39□□□□□ -1.87
LDB2O43679 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.39□□□□□ -1.87
LDB2O43679 DISC2.1-201ENST00000612827 205 ntBASIC3.39□□□□□ -1.87
LDB2O43679 AC009033.1-201ENST00000624279 431 ntBASIC3.39□□□□□ -1.87
LDB2O43679 MTND5P17-201ENST00000418405 1603 ntBASIC3.39□□□□□ -1.87
LDB2O43679 TAB3P1-202ENST00000452645 1634 ntBASIC3.39□□□□□ -1.87
LDB2O43679 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.39□□□□□ -1.87
LDB2O43679 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
LDB2O43679 PRO1804-201ENST00000623780 2050 ntBASIC3.39□□□□□ -1.87
LDB2O43679 USP8P1-201ENST00000494673 3183 ntBASIC3.39□□□□□ -1.87
LDB2O43679 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.38□□□□□ -1.87
LDB2O43679 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LDB2O43679 AC004925.1-201ENST00000624256 2706 ntBASIC3.38□□□□□ -1.87
LDB2O43679 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LDB2O43679 AF127577.6-201ENST00000623352 2191 ntBASIC3.38□□□□□ -1.87
LDB2O43679 AC017071.1-201ENST00000564407 2204 ntBASIC3.38□□□□□ -1.87
LDB2O43679 RNU6-960P-201ENST00000364056 120 ntBASIC3.38□□□□□ -1.87
LDB2O43679 Y_RNA.255-201ENST00000364581 97 ntBASIC3.38□□□□□ -1.87
LDB2O43679 RNU6-996P-201ENST00000365438 107 ntBASIC3.38□□□□□ -1.87
LDB2O43679 RNU6-629P-201ENST00000384061 103 ntBASIC3.38□□□□□ -1.87
LDB2O43679 MIR490-201ENST00000384865 128 ntBASIC3.38□□□□□ -1.87
LDB2O43679 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
LDB2O43679 AC110754.1-201ENST00000399740 601 ntBASIC3.38□□□□□ -1.87
LDB2O43679 AL356968.1-201ENST00000416622 474 ntBASIC3.38□□□□□ -1.87
LDB2O43679 USP12PX-201ENST00000432383 1057 ntBASIC3.38□□□□□ -1.87
LDB2O43679 RPL21P112-201ENST00000434403 463 ntBASIC3.38□□□□□ -1.87
LDB2O43679 MTND5P20-201ENST00000448677 143 ntBASIC3.38□□□□□ -1.87
LDB2O43679 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.38□□□□□ -1.87
LDB2O43679 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.38□□□□□ -1.87
LDB2O43679 AC004801.2-202ENST00000463559 283 ntBASIC3.38□□□□□ -1.87
LDB2O43679 MRPS17P3-201ENST00000465453 385 ntBASIC3.38□□□□□ -1.87
LDB2O43679 GMFBP1-201ENST00000467831 427 ntBASIC3.38□□□□□ -1.87
LDB2O43679 AC006512.1-201ENST00000468816 291 ntBASIC3.38□□□□□ -1.87
LDB2O43679 SNRPGP3-201ENST00000469405 227 ntBASIC3.38□□□□□ -1.87
LDB2O43679 RN7SL432P-201ENST00000484057 298 ntBASIC3.38□□□□□ -1.87
LDB2O43679 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.38□□□□□ -1.87
LDB2O43679 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.38□□□□□ -1.87
LDB2O43679 Y_RNA.702-201ENST00000516843 96 ntBASIC3.38□□□□□ -1.87
LDB2O43679 SNORA31.20-201ENST00000517111 133 ntBASIC3.38□□□□□ -1.87
LDB2O43679 SNORA70.24-201ENST00000517233 118 ntBASIC3.38□□□□□ -1.87
LDB2O43679 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.38□□□□□ -1.87
LDB2O43679 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.38□□□□□ -1.87
LDB2O43679 AC093012.1-202ENST00000549403 582 ntBASIC3.38□□□□□ -1.87
LDB2O43679 HIF1AP1-201ENST00000553642 175 ntBASIC3.38□□□□□ -1.87
LDB2O43679 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.38□□□□□ -1.87
LDB2O43679 NCAPGP2-201ENST00000557911 754 ntBASIC3.38□□□□□ -1.87
LDB2O43679 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.38□□□□□ -1.87
LDB2O43679 ZNF192P1-203ENST00000565888 810 ntBASIC3.38□□□□□ -1.87
LDB2O43679 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.38□□□□□ -1.87
LDB2O43679 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.38□□□□□ -1.87
LDB2O43679 SNRPGP15-201ENST00000600149 222 ntBASIC3.38□□□□□ -1.87
LDB2O43679 AL670379.6-201ENST00000603753 252 ntBASIC3.38□□□□□ -1.87
LDB2O43679 AL670379.11-201ENST00000604059 253 ntBASIC3.38□□□□□ -1.87
LDB2O43679 AL022099.1-201ENST00000604551 712 ntBASIC3.38□□□□□ -1.87
LDB2O43679 AC008162.1-201ENST00000604718 254 ntBASIC3.38□□□□□ -1.87
LDB2O43679 AL670379.1-201ENST00000604752 252 ntBASIC3.38□□□□□ -1.87
LDB2O43679 AL670379.5-201ENST00000605253 252 ntBASIC3.38□□□□□ -1.87
LDB2O43679 AL670379.12-201ENST00000605291 253 ntBASIC3.38□□□□□ -1.87
LDB2O43679 AL670379.8-201ENST00000605353 252 ntBASIC3.38□□□□□ -1.87
LDB2O43679 AL670379.7-201ENST00000605823 252 ntBASIC3.38□□□□□ -1.87
LDB2O43679 AC025253.1-201ENST00000613623 543 ntBASIC3.38□□□□□ -1.87
LDB2O43679 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.38□□□□□ -1.87
LDB2O43679 AC093648.1-201ENST00000623546 606 ntBASIC3.38□□□□□ -1.87
LDB2O43679 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.38□□□□□ -1.87
LDB2O43679 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.38□□□□□ -1.87
LDB2O43679 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms