Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.57□□□□□ -2
MSH4O15457 AC034244.1-201ENST00000507687 207 ntBASIC2.57□□□□□ -2
MSH4O15457 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.57□□□□□ -2
MSH4O15457 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.57□□□□□ -2
MSH4O15457 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.57□□□□□ -2
MSH4O15457 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.57□□□□□ -2
MSH4O15457 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.57□□□□□ -2
MSH4O15457 MTCYBP20-201ENST00000524239 1129 ntBASIC2.57□□□□□ -2
MSH4O15457 AC013828.2-201ENST00000532487 235 ntBASIC2.57□□□□□ -2
MSH4O15457 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.57□□□□□ -2
MSH4O15457 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.57□□□□□ -2
MSH4O15457 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.57□□□□□ -2
MSH4O15457 RPL23AP78-201ENST00000599928 470 ntBASIC2.57□□□□□ -2
MSH4O15457 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.57□□□□□ -2
MSH4O15457 AC107952.2-201ENST00000606048 486 ntBASIC2.57□□□□□ -2
MSH4O15457 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.57□□□□□ -2
MSH4O15457 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
MSH4O15457 AL050303.3-201ENST00000613704 284 ntBASIC2.57□□□□□ -2
MSH4O15457 AP000676.3-201ENST00000623299 569 ntBASIC2.57□□□□□ -2
MSH4O15457 AC068787.1-201ENST00000623908 691 ntBASIC2.57□□□□□ -2
MSH4O15457 AC068880.5-201ENST00000624331 290 ntBASIC2.57□□□□□ -2
MSH4O15457 AL160394.1-201ENST00000624765 724 ntBASIC2.57□□□□□ -2
MSH4O15457 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.57□□□□□ -2
MSH4O15457 AC008669.1-201ENST00000565823 2178 ntBASIC2.57□□□□□ -2
MSH4O15457 MTND5P33-201ENST00000571250 1450 ntBASIC2.57□□□□□ -2
MSH4O15457 AC092125.1-201ENST00000562568 1995 ntBASIC2.56□□□□□ -2
MSH4O15457 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.56□□□□□ -2
MSH4O15457 AC022336.2-201ENST00000568966 2538 ntBASIC2.56□□□□□ -2
MSH4O15457 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.56□□□□□ -2
MSH4O15457 SNORA72.3-201ENST00000365074 132 ntBASIC2.56□□□□□ -2
MSH4O15457 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.56□□□□□ -2
MSH4O15457 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
MSH4O15457 ANAPC10P1-201ENST00000395991 556 ntBASIC2.56□□□□□ -2
MSH4O15457 AL139095.1-201ENST00000404326 391 ntBASIC2.56□□□□□ -2
MSH4O15457 RNU2-33P-201ENST00000410344 192 ntBASIC2.56□□□□□ -2
MSH4O15457 AL513331.1-201ENST00000411908 397 ntBASIC2.56□□□□□ -2
MSH4O15457 AC007064.1-201ENST00000412238 351 ntBASIC2.56□□□□□ -2
MSH4O15457 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.56□□□□□ -2
MSH4O15457 AC092047.1-201ENST00000424997 240 ntBASIC2.56□□□□□ -2
MSH4O15457 AL714022.1-201ENST00000439897 151 ntBASIC2.56□□□□□ -2
MSH4O15457 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.56□□□□□ -2
MSH4O15457 AP1S2P1-201ENST00000457344 379 ntBASIC2.56□□□□□ -2
MSH4O15457 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.56□□□□□ -2
MSH4O15457 AC008481.1-201ENST00000463278 396 ntBASIC2.56□□□□□ -2
MSH4O15457 AC116337.2-201ENST00000477662 156 ntBASIC2.56□□□□□ -2
MSH4O15457 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.56□□□□□ -2
MSH4O15457 CDC42P4-201ENST00000510507 563 ntBASIC2.56□□□□□ -2
MSH4O15457 OR5BM1P-201ENST00000512021 366 ntBASIC2.56□□□□□ -2
MSH4O15457 RNU6-415P-201ENST00000516252 97 ntBASIC2.56□□□□□ -2
MSH4O15457 RNU6-390P-201ENST00000516259 103 ntBASIC2.56□□□□□ -2
MSH4O15457 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.56□□□□□ -2
MSH4O15457 AC068587.4-201ENST00000533893 186 ntBASIC2.56□□□□□ -2
MSH4O15457 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.56□□□□□ -2
MSH4O15457 AP002770.2-201ENST00000543613 532 ntBASIC2.56□□□□□ -2
MSH4O15457 AC009063.1-201ENST00000563342 702 ntBASIC2.56□□□□□ -2
MSH4O15457 MIR544B-201ENST00000582372 78 ntBASIC2.56□□□□□ -2
MSH4O15457 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.56□□□□□ -2
MSH4O15457 AL136363.1-201ENST00000605349 337 ntBASIC2.56□□□□□ -2
MSH4O15457 RPL23AP88-201ENST00000605759 454 ntBASIC2.56□□□□□ -2
MSH4O15457 AC004852.3-201ENST00000614131 326 ntBASIC2.56□□□□□ -2
MSH4O15457 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.56□□□□□ -2
MSH4O15457 AC002064.3-201ENST00000623448 346 ntBASIC2.56□□□□□ -2
MSH4O15457 ZNF658B-202ENST00000615961 3375 ntBASIC2.55□□□□□ -2
MSH4O15457 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
MSH4O15457 RNA5SP181-201ENST00000410246 98 ntBASIC2.55□□□□□ -2
MSH4O15457 RN7SKP284-201ENST00000411002 343 ntBASIC2.55□□□□□ -2
MSH4O15457 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.55□□□□□ -2
MSH4O15457 AL022400.1-201ENST00000423946 935 ntBASIC2.55□□□□□ -2
MSH4O15457 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.55□□□□□ -2
MSH4O15457 ZNF519P1-201ENST00000449011 1626 ntBASIC2.55□□□□□ -2
MSH4O15457 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.55□□□□□ -2
MSH4O15457 SNORD11.1-201ENST00000459482 85 ntBASIC2.55□□□□□ -2
MSH4O15457 AC138853.1-201ENST00000503549 823 ntBASIC2.55□□□□□ -2
MSH4O15457 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.55□□□□□ -2
MSH4O15457 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.55□□□□□ -2
MSH4O15457 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.55□□□□□ -2
MSH4O15457 AP004247.1-201ENST00000531556 1289 ntBASIC2.55□□□□□ -2
MSH4O15457 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.55□□□□□ -2
MSH4O15457 AC023050.2-201ENST00000544968 387 ntBASIC2.55□□□□□ -2
MSH4O15457 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.55□□□□□ -2
MSH4O15457 AL133153.1-201ENST00000557756 303 ntBASIC2.55□□□□□ -2
MSH4O15457 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
MSH4O15457 AC138915.1-201ENST00000565427 1685 ntBASIC2.55□□□□□ -2
MSH4O15457 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.55□□□□□ -2
MSH4O15457 AC008739.2-201ENST00000597006 317 ntBASIC2.55□□□□□ -2
MSH4O15457 AL161729.4-201ENST00000604650 476 ntBASIC2.55□□□□□ -2
MSH4O15457 AC004908.2-201ENST00000609090 574 ntBASIC2.55□□□□□ -2
MSH4O15457 TUSC7.1-201ENST00000610969 165 ntBASIC2.55□□□□□ -2
MSH4O15457 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
MSH4O15457 AC010297.1-201ENST00000623948 149 ntBASIC2.55□□□□□ -2
MSH4O15457 MTND1P37-201ENST00000636562 264 ntBASIC2.55□□□□□ -2
MSH4O15457 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
MSH4O15457 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
MSH4O15457 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.54□□□□□ -2
MSH4O15457 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.54□□□□□ -2
MSH4O15457 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.54□□□□□ -2
MSH4O15457 VTRNA1-1-201ENST00000363120 99 ntBASIC2.54□□□□□ -2
MSH4O15457 RNU1-73P-201ENST00000383971 164 ntBASIC2.54□□□□□ -2
MSH4O15457 RNU6-217P-201ENST00000384164 104 ntBASIC2.54□□□□□ -2
MSH4O15457 RNU6-769P-201ENST00000384407 104 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 160.7 ms