Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AC078785.3-201ENST00000476607 425 ntBASIC4.22□□□□□ -1.73
FOXN1O15353 TMEM248P1-201ENST00000510579 951 ntBASIC4.22□□□□□ -1.73
FOXN1O15353 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.22□□□□□ -1.73
FOXN1O15353 AF186190.1-201ENST00000517470 480 ntBASIC4.22□□□□□ -1.73
FOXN1O15353 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.22□□□□□ -1.73
FOXN1O15353 AC107934.1-201ENST00000522215 217 ntBASIC4.22□□□□□ -1.73
FOXN1O15353 COX6CP5-201ENST00000527162 228 ntBASIC4.22□□□□□ -1.73
FOXN1O15353 AP003072.2-201ENST00000527756 676 ntBASIC4.22□□□□□ -1.73
FOXN1O15353 OR4R1P-201ENST00000529879 463 ntBASIC4.22□□□□□ -1.73
FOXN1O15353 OR5BN1P-201ENST00000532955 829 ntBASIC4.22□□□□□ -1.73
FOXN1O15353 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.22□□□□□ -1.73
FOXN1O15353 AC018630.1-201ENST00000541376 925 ntBASIC4.22□□□□□ -1.73
FOXN1O15353 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.22□□□□□ -1.73
FOXN1O15353 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.22□□□□□ -1.73
FOXN1O15353 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.22□□□□□ -1.73
FOXN1O15353 SULT1C2P1-202ENST00000562418 459 ntBASIC4.22□□□□□ -1.73
FOXN1O15353 LARP7P2-201ENST00000575306 125 ntBASIC4.22□□□□□ -1.73
FOXN1O15353 POLR3GP2-201ENST00000588366 668 ntBASIC4.22□□□□□ -1.73
FOXN1O15353 AC008687.2-201ENST00000597865 520 ntBASIC4.22□□□□□ -1.73
FOXN1O15353 AL355598.1-201ENST00000604169 202 ntBASIC4.22□□□□□ -1.73
FOXN1O15353 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.22□□□□□ -1.73
FOXN1O15353 AC121334.2-201ENST00000605387 271 ntBASIC4.22□□□□□ -1.73
FOXN1O15353 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.22□□□□□ -1.73
FOXN1O15353 AL355472.4-201ENST00000610233 626 ntBASIC4.22□□□□□ -1.73
FOXN1O15353 MIR7843-201ENST00000622274 79 ntBASIC4.22□□□□□ -1.73
FOXN1O15353 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.22□□□□□ -1.73
FOXN1O15353 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.22□□□□□ -1.73
FOXN1O15353 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.22□□□□□ -1.73
FOXN1O15353 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.22□□□□□ -1.73
FOXN1O15353 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.22□□□□□ -1.73
FOXN1O15353 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
FOXN1O15353 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.21□□□□□ -1.74
FOXN1O15353 MIR422A-201ENST00000362286 90 ntBASIC4.21□□□□□ -1.74
FOXN1O15353 RNU6-984P-201ENST00000363236 109 ntBASIC4.21□□□□□ -1.74
FOXN1O15353 RNU6-1097P-201ENST00000363586 107 ntBASIC4.21□□□□□ -1.74
FOXN1O15353 RNU6-1318P-201ENST00000365389 103 ntBASIC4.21□□□□□ -1.74
FOXN1O15353 RNU6-744P-201ENST00000365557 107 ntBASIC4.21□□□□□ -1.74
FOXN1O15353 RNU6-1316P-201ENST00000384242 108 ntBASIC4.21□□□□□ -1.74
FOXN1O15353 RNU6-1297P-201ENST00000384415 104 ntBASIC4.21□□□□□ -1.74
FOXN1O15353 MIR568-201ENST00000385036 95 ntBASIC4.21□□□□□ -1.74
FOXN1O15353 AC127526.1-201ENST00000417526 366 ntBASIC4.21□□□□□ -1.74
FOXN1O15353 DBIP2-201ENST00000419076 262 ntBASIC4.21□□□□□ -1.74
FOXN1O15353 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.21□□□□□ -1.74
FOXN1O15353 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.21□□□□□ -1.74
FOXN1O15353 AC119618.1-201ENST00000434191 222 ntBASIC4.21□□□□□ -1.74
FOXN1O15353 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.21□□□□□ -1.74
FOXN1O15353 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.21□□□□□ -1.74
FOXN1O15353 AC007547.1-201ENST00000462177 490 ntBASIC4.21□□□□□ -1.74
FOXN1O15353 RN7SL432P-201ENST00000484057 298 ntBASIC4.21□□□□□ -1.74
FOXN1O15353 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.21□□□□□ -1.74
FOXN1O15353 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.21□□□□□ -1.74
FOXN1O15353 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.21□□□□□ -1.74
FOXN1O15353 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.21□□□□□ -1.74
FOXN1O15353 BNIP3P6-201ENST00000549284 499 ntBASIC4.21□□□□□ -1.74
FOXN1O15353 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.21□□□□□ -1.74
FOXN1O15353 MIR3162-201ENST00000581818 82 ntBASIC4.21□□□□□ -1.74
FOXN1O15353 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.21□□□□□ -1.74
FOXN1O15353 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.21□□□□□ -1.74
FOXN1O15353 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.21□□□□□ -1.74
FOXN1O15353 U6.101-201ENST00000637707 76 ntBASIC4.21□□□□□ -1.74
FOXN1O15353 AC092447.10-201ENST00000620607 1652 ntBASIC4.21□□□□□ -1.74
FOXN1O15353 AC092125.1-201ENST00000562568 1995 ntBASIC4.21□□□□□ -1.74
FOXN1O15353 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
FOXN1O15353 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.21□□□□□ -1.74
FOXN1O15353 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.21□□□□□ -1.74
FOXN1O15353 AC114546.3-201ENST00000623582 1734 ntBASIC4.21□□□□□ -1.74
FOXN1O15353 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
FOXN1O15353 ASNSP3-201ENST00000451989 1306 ntBASIC4.21□□□□□ -1.74
FOXN1O15353 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.2□□□□□ -1.74
FOXN1O15353 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
FOXN1O15353 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
FOXN1O15353 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
FOXN1O15353 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
FOXN1O15353 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
FOXN1O15353 RNU6-996P-201ENST00000365438 107 ntBASIC4.2□□□□□ -1.74
FOXN1O15353 SNORA68.2-201ENST00000391263 128 ntBASIC4.2□□□□□ -1.74
FOXN1O15353 AL391417.1-201ENST00000404100 426 ntBASIC4.2□□□□□ -1.74
FOXN1O15353 RNU6-1304P-201ENST00000411374 106 ntBASIC4.2□□□□□ -1.74
FOXN1O15353 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.2□□□□□ -1.74
FOXN1O15353 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.2□□□□□ -1.74
FOXN1O15353 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.2□□□□□ -1.74
FOXN1O15353 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.2□□□□□ -1.74
FOXN1O15353 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.2□□□□□ -1.74
FOXN1O15353 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.2□□□□□ -1.74
FOXN1O15353 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.2□□□□□ -1.74
FOXN1O15353 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.2□□□□□ -1.74
FOXN1O15353 MTND3P16-201ENST00000452205 344 ntBASIC4.2□□□□□ -1.74
FOXN1O15353 RPS20P32-201ENST00000456044 356 ntBASIC4.2□□□□□ -1.74
FOXN1O15353 AC026410.2-201ENST00000460281 156 ntBASIC4.2□□□□□ -1.74
FOXN1O15353 AC006511.1-201ENST00000470614 315 ntBASIC4.2□□□□□ -1.74
FOXN1O15353 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.2□□□□□ -1.74
FOXN1O15353 AC010301.1-201ENST00000473936 355 ntBASIC4.2□□□□□ -1.74
FOXN1O15353 AL163973.1-201ENST00000484753 577 ntBASIC4.2□□□□□ -1.74
FOXN1O15353 HMGB3P15-201ENST00000507326 574 ntBASIC4.2□□□□□ -1.74
FOXN1O15353 AC026801.2-201ENST00000515352 425 ntBASIC4.2□□□□□ -1.74
FOXN1O15353 Y_RNA.720-201ENST00000517166 92 ntBASIC4.2□□□□□ -1.74
FOXN1O15353 SNORA25.17-201ENST00000517184 124 ntBASIC4.2□□□□□ -1.74
FOXN1O15353 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.2□□□□□ -1.74
FOXN1O15353 AC110588.1-201ENST00000559699 137 ntBASIC4.2□□□□□ -1.74
FOXN1O15353 MIR4524B-201ENST00000581569 115 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms