Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 SNORA9.2-201ENST00000365361 133 ntBASIC3.37□□□□□ -1.87
ATP2A1O14983 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ATP2A1O14983 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
ATP2A1O14983 TXNP7-201ENST00000406296 293 ntBASIC3.37□□□□□ -1.87
ATP2A1O14983 RNU2-16P-201ENST00000410712 136 ntBASIC3.37□□□□□ -1.87
ATP2A1O14983 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.37□□□□□ -1.87
ATP2A1O14983 C1DP2-201ENST00000418167 426 ntBASIC3.37□□□□□ -1.87
ATP2A1O14983 RPS15AP12-201ENST00000419498 388 ntBASIC3.37□□□□□ -1.87
ATP2A1O14983 YPEL5P1-201ENST00000419731 367 ntBASIC3.37□□□□□ -1.87
ATP2A1O14983 AC008850.1-201ENST00000427546 362 ntBASIC3.37□□□□□ -1.87
ATP2A1O14983 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ATP2A1O14983 AC119618.1-201ENST00000434191 222 ntBASIC3.37□□□□□ -1.87
ATP2A1O14983 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.37□□□□□ -1.87
ATP2A1O14983 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.37□□□□□ -1.87
ATP2A1O14983 RPS24P13-201ENST00000442520 397 ntBASIC3.37□□□□□ -1.87
ATP2A1O14983 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.37□□□□□ -1.87
ATP2A1O14983 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.37□□□□□ -1.87
ATP2A1O14983 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.37□□□□□ -1.87
ATP2A1O14983 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.37□□□□□ -1.87
ATP2A1O14983 TPT1P7-201ENST00000458300 517 ntBASIC3.37□□□□□ -1.87
ATP2A1O14983 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.37□□□□□ -1.87
ATP2A1O14983 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.37□□□□□ -1.87
ATP2A1O14983 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ATP2A1O14983 CDC42P4-201ENST00000510507 563 ntBASIC3.37□□□□□ -1.87
ATP2A1O14983 AL359273.1-201ENST00000510918 627 ntBASIC3.37□□□□□ -1.87
ATP2A1O14983 SCGB1D5P-201ENST00000515134 247 ntBASIC3.37□□□□□ -1.87
ATP2A1O14983 SNORA70.16-201ENST00000516390 95 ntBASIC3.37□□□□□ -1.87
ATP2A1O14983 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.37□□□□□ -1.87
ATP2A1O14983 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.37□□□□□ -1.87
ATP2A1O14983 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.37□□□□□ -1.87
ATP2A1O14983 AC123904.3-201ENST00000547218 814 ntBASIC3.37□□□□□ -1.87
ATP2A1O14983 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.37□□□□□ -1.87
ATP2A1O14983 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.37□□□□□ -1.87
ATP2A1O14983 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.37□□□□□ -1.87
ATP2A1O14983 AC012213.3-201ENST00000577199 777 ntBASIC3.37□□□□□ -1.87
ATP2A1O14983 AF038458.1-201ENST00000588406 262 ntBASIC3.37□□□□□ -1.87
ATP2A1O14983 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.37□□□□□ -1.87
ATP2A1O14983 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.37□□□□□ -1.87
ATP2A1O14983 AC079089.3-201ENST00000603094 673 ntBASIC3.37□□□□□ -1.87
ATP2A1O14983 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.37□□□□□ -1.87
ATP2A1O14983 AP000254.1-201ENST00000609934 520 ntBASIC3.37□□□□□ -1.87
ATP2A1O14983 AL110115.1-201ENST00000614396 364 ntBASIC3.37□□□□□ -1.87
ATP2A1O14983 SNHG22-203ENST00000617833 660 ntBASIC3.37□□□□□ -1.87
ATP2A1O14983 AC110994.2-201ENST00000635481 492 ntBASIC3.37□□□□□ -1.87
ATP2A1O14983 AC004972.1-201ENST00000623934 2209 ntBASIC3.37□□□□□ -1.87
ATP2A1O14983 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.37□□□□□ -1.87
ATP2A1O14983 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ATP2A1O14983 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ATP2A1O14983 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ATP2A1O14983 RNU6-1284P-201ENST00000363701 100 ntBASIC3.36□□□□□ -1.87
ATP2A1O14983 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.36□□□□□ -1.87
ATP2A1O14983 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.36□□□□□ -1.87
ATP2A1O14983 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ATP2A1O14983 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.36□□□□□ -1.87
ATP2A1O14983 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.36□□□□□ -1.87
ATP2A1O14983 AC137499.1-201ENST00000427602 88 ntBASIC3.36□□□□□ -1.87
ATP2A1O14983 RPL21P40-201ENST00000428586 483 ntBASIC3.36□□□□□ -1.87
ATP2A1O14983 DLGAP5P1-201ENST00000430307 464 ntBASIC3.36□□□□□ -1.87
ATP2A1O14983 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.36□□□□□ -1.87
ATP2A1O14983 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.36□□□□□ -1.87
ATP2A1O14983 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.36□□□□□ -1.87
ATP2A1O14983 RPS24P1-201ENST00000438550 371 ntBASIC3.36□□□□□ -1.87
ATP2A1O14983 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.36□□□□□ -1.87
ATP2A1O14983 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.36□□□□□ -1.87
ATP2A1O14983 MTND4LP22-201ENST00000508209 276 ntBASIC3.36□□□□□ -1.87
ATP2A1O14983 RN7SKP298-201ENST00000515950 94 ntBASIC3.36□□□□□ -1.87
ATP2A1O14983 RNU6-405P-201ENST00000516637 110 ntBASIC3.36□□□□□ -1.87
ATP2A1O14983 RNA5SP337-201ENST00000517007 109 ntBASIC3.36□□□□□ -1.87
ATP2A1O14983 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.36□□□□□ -1.87
ATP2A1O14983 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.36□□□□□ -1.87
ATP2A1O14983 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.36□□□□□ -1.87
ATP2A1O14983 AGGF1P4-201ENST00000568249 801 ntBASIC3.36□□□□□ -1.87
ATP2A1O14983 AC024153.1-201ENST00000603103 365 ntBASIC3.36□□□□□ -1.87
ATP2A1O14983 ATP1B3P1-201ENST00000605365 821 ntBASIC3.36□□□□□ -1.87
ATP2A1O14983 AL139286.2-201ENST00000606838 396 ntBASIC3.36□□□□□ -1.87
ATP2A1O14983 AC004696.1-201ENST00000614345 607 ntBASIC3.36□□□□□ -1.87
ATP2A1O14983 AC013476.2-201ENST00000614456 459 ntBASIC3.36□□□□□ -1.87
ATP2A1O14983 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.36□□□□□ -1.87
ATP2A1O14983 AC006338.1-201ENST00000618453 749 ntBASIC3.36□□□□□ -1.87
ATP2A1O14983 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.36□□□□□ -1.87
ATP2A1O14983 AL136313.1-201ENST00000624804 202 ntBASIC3.36□□□□□ -1.87
ATP2A1O14983 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
ATP2A1O14983 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.36□□□□□ -1.87
ATP2A1O14983 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.36□□□□□ -1.87
ATP2A1O14983 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ATP2A1O14983 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ATP2A1O14983 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
ATP2A1O14983 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ATP2A1O14983 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
ATP2A1O14983 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.35□□□□□ -1.87
ATP2A1O14983 SNORA18.3-201ENST00000384122 132 ntBASIC3.35□□□□□ -1.87
ATP2A1O14983 AL359634.1-202ENST00000404721 284 ntBASIC3.35□□□□□ -1.87
ATP2A1O14983 RNA5SP274-201ENST00000410484 108 ntBASIC3.35□□□□□ -1.87
ATP2A1O14983 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.35□□□□□ -1.87
ATP2A1O14983 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.35□□□□□ -1.87
ATP2A1O14983 AC018630.2-202ENST00000422992 927 ntBASIC3.35□□□□□ -1.87
ATP2A1O14983 TRIAP1P1-201ENST00000427062 225 ntBASIC3.35□□□□□ -1.87
ATP2A1O14983 ISCA1P6-201ENST00000427740 390 ntBASIC3.35□□□□□ -1.87
ATP2A1O14983 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.35□□□□□ -1.87
ATP2A1O14983 USP12PX-201ENST00000432383 1057 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms