Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 RPS15AP5-201ENST00000436276 388 ntBASIC1.46□□□□□ -2.18
SDCBPO00560 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.46□□□□□ -2.18
SDCBPO00560 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.46□□□□□ -2.18
SDCBPO00560 OR10R1P-201ENST00000441524 1141 ntBASIC1.46□□□□□ -2.18
SDCBPO00560 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC1.46□□□□□ -2.18
SDCBPO00560 SEPT14P24-201ENST00000447236 180 ntBASIC1.46□□□□□ -2.18
SDCBPO00560 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.46□□□□□ -2.18
SDCBPO00560 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC1.46□□□□□ -2.18
SDCBPO00560 AC112518.2-201ENST00000508565 425 ntBASIC1.46□□□□□ -2.18
SDCBPO00560 AC026616.1-201ENST00000523157 525 ntBASIC1.46□□□□□ -2.18
SDCBPO00560 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC1.46□□□□□ -2.18
SDCBPO00560 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.46□□□□□ -2.18
SDCBPO00560 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.46□□□□□ -2.18
SDCBPO00560 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC1.46□□□□□ -2.18
SDCBPO00560 AC124283.4-201ENST00000581815 456 ntBASIC1.46□□□□□ -2.18
SDCBPO00560 MIR3199-1-201ENST00000582434 88 ntBASIC1.46□□□□□ -2.18
SDCBPO00560 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.46□□□□□ -2.18
SDCBPO00560 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.46□□□□□ -2.18
SDCBPO00560 AC008121.1-201ENST00000603244 268 ntBASIC1.46□□□□□ -2.18
SDCBPO00560 AC008498.1-201ENST00000613012 531 ntBASIC1.46□□□□□ -2.18
SDCBPO00560 AL449363.1-201ENST00000617815 186 ntBASIC1.46□□□□□ -2.18
SDCBPO00560 AL596245.1-201ENST00000618994 362 ntBASIC1.46□□□□□ -2.18
SDCBPO00560 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.46□□□□□ -2.18
SDCBPO00560 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.46□□□□□ -2.18
SDCBPO00560 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.46□□□□□ -2.18
SDCBPO00560 AC005832.2-201ENST00000538921 1430 ntBASIC1.46□□□□□ -2.18
SDCBPO00560 AC004520.1-201ENST00000608362 1413 ntBASIC1.46□□□□□ -2.18
SDCBPO00560 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.45□□□□□ -2.18
SDCBPO00560 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
SDCBPO00560 AC011477.1-204ENST00000623416 1325 ntBASIC1.45□□□□□ -2.18
SDCBPO00560 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC1.45□□□□□ -2.18
SDCBPO00560 MIR218-1-201ENST00000384999 110 ntBASIC1.45□□□□□ -2.18
SDCBPO00560 RPL23AP29-201ENST00000397284 453 ntBASIC1.45□□□□□ -2.18
SDCBPO00560 RNU6-1140P-201ENST00000410517 106 ntBASIC1.45□□□□□ -2.18
SDCBPO00560 CCDC58P2-201ENST00000417131 366 ntBASIC1.45□□□□□ -2.18
SDCBPO00560 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.45□□□□□ -2.18
SDCBPO00560 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.45□□□□□ -2.18
SDCBPO00560 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.45□□□□□ -2.18
SDCBPO00560 EIF4EP4-201ENST00000424916 578 ntBASIC1.45□□□□□ -2.18
SDCBPO00560 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.45□□□□□ -2.18
SDCBPO00560 AC007919.1-201ENST00000429380 217 ntBASIC1.45□□□□□ -2.18
SDCBPO00560 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.45□□□□□ -2.18
SDCBPO00560 MTCYBP15-201ENST00000433123 1127 ntBASIC1.45□□□□□ -2.18
SDCBPO00560 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.45□□□□□ -2.18
SDCBPO00560 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.45□□□□□ -2.18
SDCBPO00560 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.45□□□□□ -2.18
SDCBPO00560 AC092393.1-201ENST00000439625 742 ntBASIC1.45□□□□□ -2.18
SDCBPO00560 AC093155.1-201ENST00000440164 826 ntBASIC1.45□□□□□ -2.18
SDCBPO00560 AL500527.1-201ENST00000448532 255 ntBASIC1.45□□□□□ -2.18
SDCBPO00560 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.45□□□□□ -2.18
SDCBPO00560 OFD1P3Y-201ENST00000453312 783 ntBASIC1.45□□□□□ -2.18
SDCBPO00560 MTND2P24-201ENST00000453434 806 ntBASIC1.45□□□□□ -2.18
SDCBPO00560 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.45□□□□□ -2.18
SDCBPO00560 AC055731.1-201ENST00000474387 401 ntBASIC1.45□□□□□ -2.18
SDCBPO00560 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.45□□□□□ -2.18
SDCBPO00560 RNU6-1261P-201ENST00000517194 104 ntBASIC1.45□□□□□ -2.18
SDCBPO00560 SNORA31.23-201ENST00000517219 133 ntBASIC1.45□□□□□ -2.18
SDCBPO00560 AC104581.2-201ENST00000572227 430 ntBASIC1.45□□□□□ -2.18
SDCBPO00560 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC1.45□□□□□ -2.18
SDCBPO00560 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.45□□□□□ -2.18
SDCBPO00560 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.45□□□□□ -2.18
SDCBPO00560 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.45□□□□□ -2.18
SDCBPO00560 AC136601.2-201ENST00000604356 474 ntBASIC1.45□□□□□ -2.18
SDCBPO00560 FTX_3.1-201ENST00000610451 147 ntBASIC1.45□□□□□ -2.18
SDCBPO00560 AL589743.7-201ENST00000612637 233 ntBASIC1.45□□□□□ -2.18
SDCBPO00560 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
SDCBPO00560 AC253576.2-201ENST00000618815 580 ntBASIC1.45□□□□□ -2.18
SDCBPO00560 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SDCBPO00560 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SDCBPO00560 RNU6-884P-201ENST00000363889 107 ntBASIC1.44□□□□□ -2.18
SDCBPO00560 RNU6-343P-201ENST00000364709 104 ntBASIC1.44□□□□□ -2.18
SDCBPO00560 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
SDCBPO00560 RNU6-354P-201ENST00000383862 107 ntBASIC1.44□□□□□ -2.18
SDCBPO00560 RNU6-741P-201ENST00000383889 107 ntBASIC1.44□□□□□ -2.18
SDCBPO00560 RNU6-610P-201ENST00000384264 107 ntBASIC1.44□□□□□ -2.18
SDCBPO00560 RNU6-140P-201ENST00000384566 108 ntBASIC1.44□□□□□ -2.18
SDCBPO00560 MIR506-201ENST00000384998 124 ntBASIC1.44□□□□□ -2.18
SDCBPO00560 MIR9-3-201ENST00000385084 90 ntBASIC1.44□□□□□ -2.18
SDCBPO00560 MIR676-201ENST00000390702 67 ntBASIC1.44□□□□□ -2.18
SDCBPO00560 RNU6-750P-201ENST00000390946 107 ntBASIC1.44□□□□□ -2.18
SDCBPO00560 MTND3P20-201ENST00000407663 186 ntBASIC1.44□□□□□ -2.18
SDCBPO00560 MTATP6P27-201ENST00000416987 621 ntBASIC1.44□□□□□ -2.18
SDCBPO00560 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.44□□□□□ -2.18
SDCBPO00560 AC008850.1-201ENST00000427546 362 ntBASIC1.44□□□□□ -2.18
SDCBPO00560 HMGB1P9-201ENST00000429856 646 ntBASIC1.44□□□□□ -2.18
SDCBPO00560 RPL35AP22-201ENST00000436855 335 ntBASIC1.44□□□□□ -2.18
SDCBPO00560 SDCBPP1-201ENST00000440192 890 ntBASIC1.44□□□□□ -2.18
SDCBPO00560 MTCYBP11-201ENST00000447254 1109 ntBASIC1.44□□□□□ -2.18
SDCBPO00560 AC008379.1-201ENST00000463655 464 ntBASIC1.44□□□□□ -2.18
SDCBPO00560 BZW1P2-201ENST00000473537 826 ntBASIC1.44□□□□□ -2.18
SDCBPO00560 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.44□□□□□ -2.18
SDCBPO00560 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SDCBPO00560 RPL23AP63-201ENST00000498752 471 ntBASIC1.44□□□□□ -2.18
SDCBPO00560 HMGB3P17-201ENST00000504195 649 ntBASIC1.44□□□□□ -2.18
SDCBPO00560 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SDCBPO00560 AC022447.1-201ENST00000515358 464 ntBASIC1.44□□□□□ -2.18
SDCBPO00560 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.44□□□□□ -2.18
SDCBPO00560 snoZ278.1-201ENST00000517059 112 ntBASIC1.44□□□□□ -2.18
SDCBPO00560 SNORA31.25-201ENST00000517242 134 ntBASIC1.44□□□□□ -2.18
SDCBPO00560 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms