Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.09□□□□□ -2.07
DFFAO00273 USP9YP8-201ENST00000441913 500 ntBASIC2.09□□□□□ -2.07
DFFAO00273 RPL32P28-201ENST00000443577 397 ntBASIC2.09□□□□□ -2.07
DFFAO00273 RPL23AP7-203ENST00000449021 469 ntBASIC2.09□□□□□ -2.07
DFFAO00273 MTND1P31-201ENST00000449206 961 ntBASIC2.09□□□□□ -2.07
DFFAO00273 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.09□□□□□ -2.07
DFFAO00273 AC113347.3-201ENST00000509113 148 ntBASIC2.09□□□□□ -2.07
DFFAO00273 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC2.09□□□□□ -2.07
DFFAO00273 IGKV3-31-201ENST00000523109 329 ntBASIC2.09□□□□□ -2.07
DFFAO00273 LRRC6P1-201ENST00000532188 885 ntBASIC2.09□□□□□ -2.07
DFFAO00273 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.09□□□□□ -2.07
DFFAO00273 AL359212.1-201ENST00000556608 614 ntBASIC2.09□□□□□ -2.07
DFFAO00273 OR4K7P-201ENST00000580232 945 ntBASIC2.09□□□□□ -2.07
DFFAO00273 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.09□□□□□ -2.07
DFFAO00273 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.09□□□□□ -2.07
DFFAO00273 VN1R83P-201ENST00000595685 445 ntBASIC2.09□□□□□ -2.07
DFFAO00273 AC009314.1-201ENST00000603871 304 ntBASIC2.09□□□□□ -2.07
DFFAO00273 RPL21P136-201ENST00000605378 396 ntBASIC2.09□□□□□ -2.07
DFFAO00273 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
DFFAO00273 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.09□□□□□ -2.07
DFFAO00273 AC104985.3-201ENST00000623479 597 ntBASIC2.09□□□□□ -2.07
DFFAO00273 AC019226.1-201ENST00000625666 515 ntBASIC2.09□□□□□ -2.07
DFFAO00273 AC080128.1-201ENST00000474389 1917 ntBASIC2.09□□□□□ -2.08
DFFAO00273 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.08□□□□□ -2.08
DFFAO00273 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.08□□□□□ -2.08
DFFAO00273 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
DFFAO00273 RNU6-750P-201ENST00000390946 107 ntBASIC2.08□□□□□ -2.08
DFFAO00273 RNU6-754P-201ENST00000391166 107 ntBASIC2.08□□□□□ -2.08
DFFAO00273 RNU6-516P-201ENST00000411381 104 ntBASIC2.08□□□□□ -2.08
DFFAO00273 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.08□□□□□ -2.08
DFFAO00273 AC069282.1-201ENST00000411911 526 ntBASIC2.08□□□□□ -2.08
DFFAO00273 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.08□□□□□ -2.08
DFFAO00273 SEPT2P1-201ENST00000419651 180 ntBASIC2.08□□□□□ -2.08
DFFAO00273 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.08□□□□□ -2.08
DFFAO00273 COX7BP2-201ENST00000437976 242 ntBASIC2.08□□□□□ -2.08
DFFAO00273 PGBD4P3-201ENST00000440731 581 ntBASIC2.08□□□□□ -2.08
DFFAO00273 AC025033.1-201ENST00000463883 194 ntBASIC2.08□□□□□ -2.08
DFFAO00273 AC079203.1-201ENST00000487972 404 ntBASIC2.08□□□□□ -2.08
DFFAO00273 RNU1-40P-201ENST00000516816 164 ntBASIC2.08□□□□□ -2.08
DFFAO00273 RNU1-97P-201ENST00000516872 164 ntBASIC2.08□□□□□ -2.08
DFFAO00273 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.08□□□□□ -2.08
DFFAO00273 DEFB131D-201ENST00000526803 184 ntBASIC2.08□□□□□ -2.08
DFFAO00273 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.08□□□□□ -2.08
DFFAO00273 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.08□□□□□ -2.08
DFFAO00273 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.08□□□□□ -2.08
DFFAO00273 AGGF1P5-201ENST00000567900 919 ntBASIC2.08□□□□□ -2.08
DFFAO00273 AL121917.1-203ENST00000605534 577 ntBASIC2.08□□□□□ -2.08
DFFAO00273 OR10AB1P-201ENST00000609613 938 ntBASIC2.08□□□□□ -2.08
DFFAO00273 AC013412.1-201ENST00000610687 192 ntBASIC2.08□□□□□ -2.08
DFFAO00273 RNU6-1192P-201ENST00000612197 107 ntBASIC2.08□□□□□ -2.08
DFFAO00273 SDR42E1P2-201ENST00000614861 481 ntBASIC2.08□□□□□ -2.08
DFFAO00273 RNU6-489P-201ENST00000618289 107 ntBASIC2.08□□□□□ -2.08
DFFAO00273 AP003476.1-201ENST00000623984 516 ntBASIC2.08□□□□□ -2.08
DFFAO00273 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.08□□□□□ -2.08
DFFAO00273 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
DFFAO00273 MTND4P35-201ENST00000604257 1375 ntBASIC2.08□□□□□ -2.08
DFFAO00273 AC010329.5-201ENST00000623497 2174 ntBASIC2.08□□□□□ -2.08
DFFAO00273 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
DFFAO00273 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
DFFAO00273 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
DFFAO00273 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.07□□□□□ -2.08
DFFAO00273 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
DFFAO00273 SNORA70B-201ENST00000384210 135 ntBASIC2.07□□□□□ -2.08
DFFAO00273 AL590084.2-201ENST00000401481 382 ntBASIC2.07□□□□□ -2.08
DFFAO00273 AL356421.1-201ENST00000403255 413 ntBASIC2.07□□□□□ -2.08
DFFAO00273 TXNP7-201ENST00000406296 293 ntBASIC2.07□□□□□ -2.08
DFFAO00273 MTND1P21-201ENST00000412991 285 ntBASIC2.07□□□□□ -2.08
DFFAO00273 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.07□□□□□ -2.08
DFFAO00273 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.07□□□□□ -2.08
DFFAO00273 GTF2IP3-201ENST00000433887 494 ntBASIC2.07□□□□□ -2.08
DFFAO00273 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.07□□□□□ -2.08
DFFAO00273 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.07□□□□□ -2.08
DFFAO00273 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.07□□□□□ -2.08
DFFAO00273 OSTCP8-201ENST00000445117 448 ntBASIC2.07□□□□□ -2.08
DFFAO00273 RNU6-717P-201ENST00000459076 104 ntBASIC2.07□□□□□ -2.08
DFFAO00273 RPS29P21-201ENST00000496272 170 ntBASIC2.07□□□□□ -2.08
DFFAO00273 SUMO2P5-201ENST00000506790 245 ntBASIC2.07□□□□□ -2.08
DFFAO00273 AC098591.2-201ENST00000510152 315 ntBASIC2.07□□□□□ -2.08
DFFAO00273 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.07□□□□□ -2.08
DFFAO00273 AC022447.1-201ENST00000515358 464 ntBASIC2.07□□□□□ -2.08
DFFAO00273 RNU6-150P-201ENST00000516237 95 ntBASIC2.07□□□□□ -2.08
DFFAO00273 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.07□□□□□ -2.08
DFFAO00273 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.07□□□□□ -2.08
DFFAO00273 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.07□□□□□ -2.08
DFFAO00273 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.07□□□□□ -2.08
DFFAO00273 CYCSP2-201ENST00000558168 301 ntBASIC2.07□□□□□ -2.08
DFFAO00273 AL512347.1-201ENST00000566420 503 ntBASIC2.07□□□□□ -2.08
DFFAO00273 MTND3P13-201ENST00000574391 343 ntBASIC2.07□□□□□ -2.08
DFFAO00273 MIR4648-201ENST00000580107 72 ntBASIC2.07□□□□□ -2.08
DFFAO00273 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.07□□□□□ -2.08
DFFAO00273 AL357094.1-201ENST00000603845 844 ntBASIC2.07□□□□□ -2.08
DFFAO00273 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.07□□□□□ -2.08
DFFAO00273 AC103710.1-201ENST00000610003 901 ntBASIC2.07□□□□□ -2.08
DFFAO00273 MIR6840-201ENST00000611937 71 ntBASIC2.07□□□□□ -2.08
DFFAO00273 TUG1_2.1-201ENST00000614234 87 ntBASIC2.07□□□□□ -2.08
DFFAO00273 AC009090.3-201ENST00000616553 565 ntBASIC2.07□□□□□ -2.08
DFFAO00273 AC123767.1-202ENST00000620407 817 ntBASIC2.07□□□□□ -2.08
DFFAO00273 AC012640.5-201ENST00000623897 319 ntBASIC2.07□□□□□ -2.08
DFFAO00273 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.07□□□□□ -2.08
DFFAO00273 AP000553.5-201ENST00000641933 54 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms