Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 RNA5SP289-201ENST00000362332 137 ntBASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 RNU6-553P-201ENST00000364047 96 ntBASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 AL136372.1-201ENST00000403060 228 ntBASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 RPL23AP39-201ENST00000415533 405 ntBASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC083875.1-201ENST00000419509 405 ntBASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 RPL21P32-201ENST00000419877 477 ntBASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 AL365203.2-201ENST00000423444 196 ntBASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 MTND5P25-201ENST00000430499 799 ntBASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 OR6K5P-201ENST00000447050 945 ntBASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 HMGB1P15-201ENST00000453854 435 ntBASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 RNA5SP82-201ENST00000516707 92 ntBASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC078814.3-201ENST00000553036 491 ntBASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC090615.1-201ENST00000577519 154 ntBASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 AL158827.2-201ENST00000602494 330 ntBASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 WISP1-OT1-201ENST00000602893 642 ntBASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 BBIP1P1-201ENST00000602999 279 ntBASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 DUXAP11-201ENST00000603858 526 ntBASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC008962.1-201ENST00000605729 304 ntBASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 AL355810.1-201ENST00000614629 552 ntBASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 AL590099.1-201ENST00000615276 138 ntBASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 AL138880.2-201ENST00000616214 239 ntBASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC091304.6-201ENST00000619761 202 ntBASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC012150.2-201ENST00000621300 544 ntBASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 AL360181.4-201ENST00000621752 134 ntBASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 AL691447.3-201ENST00000635020 330 ntBASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 MIR203B-201ENST00000636080 86 ntBASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC005336.3-201ENST00000623833 2679 ntBASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 MTND4P16-201ENST00000466108 1367 ntBASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 ZNF720P1-201ENST00000562403 1939 ntBASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC135776.4-201ENST00000624300 1904 ntBASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC092447.10-201ENST00000620607 1652 ntBASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 MTND5P33-201ENST00000571250 1450 ntBASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC009812.4-201ENST00000569134 1805 ntBASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 Y_RNA.169-201ENST00000363745 96 ntBASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 RNU6-1180P-201ENST00000364935 107 ntBASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 RNU1-51P-201ENST00000365345 176 ntBASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 RNU6-1074P-201ENST00000383995 104 ntBASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 RNU5A-2P-201ENST00000384337 116 ntBASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 RNU6-1207P-201ENST00000384343 107 ntBASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 RNU6-882P-201ENST00000391025 103 ntBASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 MIR1305-201ENST00000408300 86 ntBASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 RN7SKP223-201ENST00000410582 62 ntBASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 CETN4P-201ENST00000432407 469 ntBASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 SNRPEP7-201ENST00000438350 220 ntBASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 FAM103A2P-201ENST00000444122 354 ntBASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 RPS23P3-201ENST00000470993 430 ntBASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 MTND1P22-201ENST00000510572 951 ntBASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC008716.1-201ENST00000511084 513 ntBASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC105914.1-201ENST00000511798 226 ntBASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 RNA5SP216-201ENST00000516111 123 ntBASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 RNU6-528P-201ENST00000516926 100 ntBASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 RNU6-232P-201ENST00000517144 64 ntBASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 SNORA31.22-201ENST00000517204 135 ntBASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 MRPS36P5-201ENST00000551909 298 ntBASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC013444.2-201ENST00000603317 787 ntBASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC004987.4-201ENST00000603383 338 ntBASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC107214.2-201ENST00000608204 634 ntBASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC106028.5-201ENST00000610332 395 ntBASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC092881.1-201ENST00000638218 2733 ntBASIC2.34□□□□□ -2.03
TMX2-CTNND1H3BSU7 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.34□□□□□ -2.04
TMX2-CTNND1H3BSU7 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
TMX2-CTNND1H3BSU7 AL161781.1-201ENST00000354277 403 ntBASIC2.33□□□□□ -2.04
TMX2-CTNND1H3BSU7 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms