Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC116337.2-201ENST00000477662 156 ntBASIC2.79□□□□□ -1.96
NEDD8-MDP1E9PL57 AP004217.1-201ENST00000480579 346 ntBASIC2.79□□□□□ -1.96
NEDD8-MDP1E9PL57 RN7SL499P-201ENST00000481141 276 ntBASIC2.79□□□□□ -1.96
NEDD8-MDP1E9PL57 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
NEDD8-MDP1E9PL57 ARL4AP2-201ENST00000507378 601 ntBASIC2.79□□□□□ -1.96
NEDD8-MDP1E9PL57 CDC42P4-201ENST00000510507 563 ntBASIC2.79□□□□□ -1.96
NEDD8-MDP1E9PL57 AC114781.4-201ENST00000513707 639 ntBASIC2.79□□□□□ -1.96
NEDD8-MDP1E9PL57 SNORD59.2-201ENST00000516873 68 ntBASIC2.79□□□□□ -1.96
NEDD8-MDP1E9PL57 RNU6-64P-201ENST00000517119 105 ntBASIC2.79□□□□□ -1.96
NEDD8-MDP1E9PL57 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.79□□□□□ -1.96
NEDD8-MDP1E9PL57 AP003122.4-201ENST00000530980 758 ntBASIC2.79□□□□□ -1.96
NEDD8-MDP1E9PL57 AC123904.3-201ENST00000547218 814 ntBASIC2.79□□□□□ -1.96
NEDD8-MDP1E9PL57 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.79□□□□□ -1.96
NEDD8-MDP1E9PL57 MTCO3P24-201ENST00000572729 782 ntBASIC2.79□□□□□ -1.96
NEDD8-MDP1E9PL57 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.79□□□□□ -1.96
NEDD8-MDP1E9PL57 MIR4298-201ENST00000584380 73 ntBASIC2.79□□□□□ -1.96
NEDD8-MDP1E9PL57 Z94722.1-201ENST00000604328 474 ntBASIC2.79□□□□□ -1.96
NEDD8-MDP1E9PL57 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
NEDD8-MDP1E9PL57 AL603839.4-201ENST00000624658 1005 ntBASIC2.79□□□□□ -1.96
NEDD8-MDP1E9PL57 AL136313.1-201ENST00000624804 202 ntBASIC2.79□□□□□ -1.96
NEDD8-MDP1E9PL57 AC099654.13-201ENST00000639774 207 ntBASIC2.79□□□□□ -1.96
NEDD8-MDP1E9PL57 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.78□□□□□ -1.96
NEDD8-MDP1E9PL57 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
NEDD8-MDP1E9PL57 RNU6-1197P-201ENST00000391183 107 ntBASIC2.78□□□□□ -1.96
NEDD8-MDP1E9PL57 TXNP7-201ENST00000406296 293 ntBASIC2.78□□□□□ -1.96
NEDD8-MDP1E9PL57 MIR1290-201ENST00000408735 78 ntBASIC2.78□□□□□ -1.96
NEDD8-MDP1E9PL57 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.78□□□□□ -1.96
NEDD8-MDP1E9PL57 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.78□□□□□ -1.96
NEDD8-MDP1E9PL57 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.78□□□□□ -1.96
NEDD8-MDP1E9PL57 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.78□□□□□ -1.96
NEDD8-MDP1E9PL57 MTND1P28-201ENST00000435623 950 ntBASIC2.78□□□□□ -1.96
NEDD8-MDP1E9PL57 MTATP6P30-201ENST00000443540 664 ntBASIC2.78□□□□□ -1.96
NEDD8-MDP1E9PL57 RPL17P49-201ENST00000443728 411 ntBASIC2.78□□□□□ -1.96
NEDD8-MDP1E9PL57 ELOCP30-201ENST00000447108 299 ntBASIC2.78□□□□□ -1.96
NEDD8-MDP1E9PL57 RPS20P20-201ENST00000460498 340 ntBASIC2.78□□□□□ -1.96
NEDD8-MDP1E9PL57 AC008481.1-201ENST00000463278 396 ntBASIC2.78□□□□□ -1.96
NEDD8-MDP1E9PL57 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.78□□□□□ -1.96
NEDD8-MDP1E9PL57 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.78□□□□□ -1.96
NEDD8-MDP1E9PL57 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.78□□□□□ -1.96
NEDD8-MDP1E9PL57 AC006445.2-201ENST00000510061 472 ntBASIC2.78□□□□□ -1.96
NEDD8-MDP1E9PL57 TTC39CP1-201ENST00000512513 755 ntBASIC2.78□□□□□ -1.96
NEDD8-MDP1E9PL57 AP001804.3-201ENST00000525146 880 ntBASIC2.78□□□□□ -1.96
NEDD8-MDP1E9PL57 AP003181.2-201ENST00000528941 181 ntBASIC2.78□□□□□ -1.96
NEDD8-MDP1E9PL57 DEFB108A-201ENST00000530110 222 ntBASIC2.78□□□□□ -1.96
NEDD8-MDP1E9PL57 AC022878.1-201ENST00000530684 149 ntBASIC2.78□□□□□ -1.96
NEDD8-MDP1E9PL57 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.78□□□□□ -1.96
NEDD8-MDP1E9PL57 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.78□□□□□ -1.96
NEDD8-MDP1E9PL57 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.78□□□□□ -1.96
NEDD8-MDP1E9PL57 AF038458.1-201ENST00000588406 262 ntBASIC2.78□□□□□ -1.96
NEDD8-MDP1E9PL57 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.78□□□□□ -1.96
NEDD8-MDP1E9PL57 AC010620.1-201ENST00000601088 1102 ntBASIC2.78□□□□□ -1.96
NEDD8-MDP1E9PL57 KC877982.1-201ENST00000602313 470 ntBASIC2.78□□□□□ -1.96
NEDD8-MDP1E9PL57 AC112191.3-201ENST00000604371 277 ntBASIC2.78□□□□□ -1.96
NEDD8-MDP1E9PL57 AC008277.2-201ENST00000605196 797 ntBASIC2.78□□□□□ -1.96
NEDD8-MDP1E9PL57 AC010133.1-201ENST00000615809 842 ntBASIC2.78□□□□□ -1.96
NEDD8-MDP1E9PL57 AC091953.2-201ENST00000623979 160 ntBASIC2.78□□□□□ -1.96
NEDD8-MDP1E9PL57 AC092608.2-201ENST00000624427 218 ntBASIC2.78□□□□□ -1.96
NEDD8-MDP1E9PL57 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
NEDD8-MDP1E9PL57 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
NEDD8-MDP1E9PL57 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.77□□□□□ -1.97
NEDD8-MDP1E9PL57 CUL1P1-201ENST00000509510 2425 ntBASIC2.77□□□□□ -1.97
NEDD8-MDP1E9PL57 U3.4-201ENST00000363352 213 ntBASIC2.77□□□□□ -1.97
NEDD8-MDP1E9PL57 RNU5F-7P-201ENST00000363696 115 ntBASIC2.77□□□□□ -1.97
NEDD8-MDP1E9PL57 AL356057.3-201ENST00000402607 340 ntBASIC2.77□□□□□ -1.97
NEDD8-MDP1E9PL57 RN7SKP140-201ENST00000411196 284 ntBASIC2.77□□□□□ -1.97
NEDD8-MDP1E9PL57 RPL21P24-201ENST00000413752 448 ntBASIC2.77□□□□□ -1.97
NEDD8-MDP1E9PL57 AL451074.5-201ENST00000415894 435 ntBASIC2.77□□□□□ -1.97
NEDD8-MDP1E9PL57 MRPL50P2-201ENST00000416821 482 ntBASIC2.77□□□□□ -1.97
NEDD8-MDP1E9PL57 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.77□□□□□ -1.97
NEDD8-MDP1E9PL57 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.77□□□□□ -1.97
NEDD8-MDP1E9PL57 TAAR7P-201ENST00000436141 242 ntBASIC2.77□□□□□ -1.97
NEDD8-MDP1E9PL57 RPL22P17-201ENST00000438729 315 ntBASIC2.77□□□□□ -1.97
NEDD8-MDP1E9PL57 PGBD4P3-201ENST00000440731 581 ntBASIC2.77□□□□□ -1.97
NEDD8-MDP1E9PL57 TAF9P1-201ENST00000445421 515 ntBASIC2.77□□□□□ -1.97
NEDD8-MDP1E9PL57 USP9YP12-201ENST00000450481 570 ntBASIC2.77□□□□□ -1.97
NEDD8-MDP1E9PL57 TAF9P2-201ENST00000454958 515 ntBASIC2.77□□□□□ -1.97
NEDD8-MDP1E9PL57 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.77□□□□□ -1.97
NEDD8-MDP1E9PL57 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.77□□□□□ -1.97
NEDD8-MDP1E9PL57 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.77□□□□□ -1.97
NEDD8-MDP1E9PL57 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.77□□□□□ -1.97
NEDD8-MDP1E9PL57 OR5BM1P-201ENST00000512021 366 ntBASIC2.77□□□□□ -1.97
NEDD8-MDP1E9PL57 AC096725.1-201ENST00000514266 313 ntBASIC2.77□□□□□ -1.97
NEDD8-MDP1E9PL57 RNU4-29P-201ENST00000515943 174 ntBASIC2.77□□□□□ -1.97
NEDD8-MDP1E9PL57 AC100870.1-201ENST00000522035 505 ntBASIC2.77□□□□□ -1.97
NEDD8-MDP1E9PL57 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.77□□□□□ -1.97
NEDD8-MDP1E9PL57 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.77□□□□□ -1.97
NEDD8-MDP1E9PL57 AL355836.1-201ENST00000555951 870 ntBASIC2.77□□□□□ -1.97
NEDD8-MDP1E9PL57 AC027807.1-201ENST00000559921 996 ntBASIC2.77□□□□□ -1.97
NEDD8-MDP1E9PL57 AP005136.1-201ENST00000579765 429 ntBASIC2.77□□□□□ -1.97
NEDD8-MDP1E9PL57 AP001981.2-201ENST00000603241 418 ntBASIC2.77□□□□□ -1.97
NEDD8-MDP1E9PL57 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.77□□□□□ -1.97
NEDD8-MDP1E9PL57 AC239868.4-201ENST00000608318 671 ntBASIC2.77□□□□□ -1.97
NEDD8-MDP1E9PL57 SDR42E1P2-201ENST00000614861 481 ntBASIC2.77□□□□□ -1.97
NEDD8-MDP1E9PL57 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.77□□□□□ -1.97
NEDD8-MDP1E9PL57 AC068831.7-201ENST00000616954 363 ntBASIC2.77□□□□□ -1.97
NEDD8-MDP1E9PL57 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.77□□□□□ -1.97
NEDD8-MDP1E9PL57 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
NEDD8-MDP1E9PL57 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
NEDD8-MDP1E9PL57 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.76□□□□□ -1.97
NEDD8-MDP1E9PL57 AC092447.7-201ENST00000422212 1621 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms