Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC027807.2-201ENST00000616099 408 ntBASIC2.64□□□□□ -1.99
NPIPA2E9PIF3 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.64□□□□□ -1.99
NPIPA2E9PIF3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.64□□□□□ -1.99
NPIPA2E9PIF3 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.64□□□□□ -1.99
NPIPA2E9PIF3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 SNORA18.3-201ENST00000384122 132 ntBASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 RNU6-140P-201ENST00000384566 108 ntBASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 RPL7P8-201ENST00000411964 730 ntBASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 AL096701.2-201ENST00000416920 238 ntBASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 RPL7P37-201ENST00000425095 738 ntBASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 RPL23AP41-201ENST00000484754 458 ntBASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 RNA5SP356-201ENST00000515972 94 ntBASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 AC025881.1-201ENST00000518851 512 ntBASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 AC093012.1-202ENST00000549403 582 ntBASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 AL391261.3-201ENST00000557194 520 ntBASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 MTND3P12-201ENST00000559068 328 ntBASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 AL158211.1-201ENST00000566763 763 ntBASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 ROCK1P1-201ENST00000573767 549 ntBASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 MIR4293-201ENST00000584305 78 ntBASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 OR2AS2P-201ENST00000606902 342 ntBASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 AC239868.4-201ENST00000608318 671 ntBASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 AC107871.2-201ENST00000612894 502 ntBASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 AC122133.1-201ENST00000613964 233 ntBASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 SNHG22-203ENST00000617833 660 ntBASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 AC009159.1-201ENST00000618386 642 ntBASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 UCA1.1-201ENST00000620952 75 ntBASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 AF246928.1-201ENST00000623768 87 ntBASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 AC079248.2-201ENST00000623779 326 ntBASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 AC120349.3-201ENST00000624377 529 ntBASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 AC079416.3-201ENST00000624479 549 ntBASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 MTND5P19-201ENST00000424872 1794 ntBASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 AC026241.1-201ENST00000517873 2142 ntBASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
NPIPA2E9PIF3 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 FTLP6-201ENST00000355274 422 ntBASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 RNY4P24-201ENST00000362735 96 ntBASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 Y_RNA.169-201ENST00000363745 96 ntBASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 RNU6-533P-201ENST00000384144 107 ntBASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 RNU4-72P-201ENST00000410754 173 ntBASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 HMGN2P35-201ENST00000412164 270 ntBASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 USP9YP26-201ENST00000421008 661 ntBASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 FCF1P1-201ENST00000432690 571 ntBASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 AC105272.1-201ENST00000438604 198 ntBASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 WASF1P1-201ENST00000447560 1131 ntBASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 RPL37P4-201ENST00000448908 268 ntBASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 KATNBL1P6-201ENST00000453433 915 ntBASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 AC108059.3-201ENST00000456388 214 ntBASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 AL160314.1-201ENST00000490836 438 ntBASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 AC005178.1-201ENST00000508392 440 ntBASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 AC114786.4-201ENST00000508771 728 ntBASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 HIGD1AP13-201ENST00000509878 289 ntBASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 MTND5P13-201ENST00000513046 1079 ntBASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 SUB1P1-201ENST00000524415 382 ntBASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 ZNF519P3-201ENST00000557158 1032 ntBASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 AC109446.2-201ENST00000567872 497 ntBASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 MIR3146-201ENST00000580367 79 ntBASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 AC005498.1-201ENST00000592125 465 ntBASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 WISP1-OT1-201ENST00000602893 642 ntBASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 RPL12P50-201ENST00000603116 116 ntBASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 AC136601.2-201ENST00000604356 474 ntBASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 AL161734.1-201ENST00000609720 557 ntBASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 FTX_3.1-201ENST00000610451 147 ntBASIC2.62□□□□□ -1.99
NPIPA2E9PIF3 MIR7844-201ENST00000616161 122 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms