Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 MIR218-1-201ENST00000384999 110 ntBASIC1.11□□□□□ -2.23
TCRBV3S1A0A5B6 HMGN2P39-201ENST00000398005 273 ntBASIC1.11□□□□□ -2.23
TCRBV3S1A0A5B6 AL356131.1-201ENST00000405826 414 ntBASIC1.11□□□□□ -2.23
TCRBV3S1A0A5B6 NDUFB4P7-201ENST00000423198 363 ntBASIC1.11□□□□□ -2.23
TCRBV3S1A0A5B6 AL592447.1-201ENST00000447592 540 ntBASIC1.11□□□□□ -2.23
TCRBV3S1A0A5B6 MRPS17P3-201ENST00000465453 385 ntBASIC1.11□□□□□ -2.23
TCRBV3S1A0A5B6 AC006390.1-201ENST00000508068 283 ntBASIC1.11□□□□□ -2.23
TCRBV3S1A0A5B6 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.11□□□□□ -2.23
TCRBV3S1A0A5B6 AC079610.2-201ENST00000604818 690 ntBASIC1.11□□□□□ -2.23
TCRBV3S1A0A5B6 AC068276.1-201ENST00000605793 379 ntBASIC1.11□□□□□ -2.23
TCRBV3S1A0A5B6 AL589743.7-201ENST00000612637 233 ntBASIC1.11□□□□□ -2.23
TCRBV3S1A0A5B6 U4atac.1-201ENST00000618345 95 ntBASIC1.11□□□□□ -2.23
TCRBV3S1A0A5B6 AC097655.1-201ENST00000635075 318 ntBASIC1.11□□□□□ -2.23
TCRBV3S1A0A5B6 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
TCRBV3S1A0A5B6 SNORD14B-201ENST00000364533 90 ntBASIC1.1□□□□□ -2.23
TCRBV3S1A0A5B6 RNU6-750P-201ENST00000390946 107 ntBASIC1.1□□□□□ -2.23
TCRBV3S1A0A5B6 SNORA67.5-201ENST00000391036 107 ntBASIC1.1□□□□□ -2.23
TCRBV3S1A0A5B6 AL356421.1-201ENST00000403255 413 ntBASIC1.1□□□□□ -2.23
TCRBV3S1A0A5B6 TXNP7-201ENST00000406296 293 ntBASIC1.1□□□□□ -2.23
TCRBV3S1A0A5B6 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC1.1□□□□□ -2.23
TCRBV3S1A0A5B6 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.1□□□□□ -2.23
TCRBV3S1A0A5B6 RPS29P28-201ENST00000446439 141 ntBASIC1.1□□□□□ -2.23
TCRBV3S1A0A5B6 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.1□□□□□ -2.23
TCRBV3S1A0A5B6 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.1□□□□□ -2.23
TCRBV3S1A0A5B6 SNORD13-201ENST00000459299 104 ntBASIC1.1□□□□□ -2.23
TCRBV3S1A0A5B6 LARP1BP2-201ENST00000486594 519 ntBASIC1.1□□□□□ -2.23
TCRBV3S1A0A5B6 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.1□□□□□ -2.23
TCRBV3S1A0A5B6 AC098591.2-201ENST00000510152 315 ntBASIC1.1□□□□□ -2.23
TCRBV3S1A0A5B6 SNORA31.6-201ENST00000516241 130 ntBASIC1.1□□□□□ -2.23
TCRBV3S1A0A5B6 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.1□□□□□ -2.23
TCRBV3S1A0A5B6 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.1□□□□□ -2.23
TCRBV3S1A0A5B6 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC1.1□□□□□ -2.23
TCRBV3S1A0A5B6 AC012435.1-202ENST00000568772 240 ntBASIC1.1□□□□□ -2.23
TCRBV3S1A0A5B6 AC103987.3-201ENST00000582071 292 ntBASIC1.1□□□□□ -2.23
TCRBV3S1A0A5B6 SNORD39.3-201ENST00000584451 71 ntBASIC1.1□□□□□ -2.23
TCRBV3S1A0A5B6 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.1□□□□□ -2.23
TCRBV3S1A0A5B6 AC104763.3-201ENST00000613765 618 ntBASIC1.1□□□□□ -2.23
TCRBV3S1A0A5B6 AL356585.4-201ENST00000623078 1229 ntBASIC1.1□□□□□ -2.23
TCRBV3S1A0A5B6 AP003400.6-201ENST00000624698 740 ntBASIC1.1□□□□□ -2.23
TCRBV3S1A0A5B6 U3.13-201ENST00000364804 214 ntBASIC1.09□□□□□ -2.23
TCRBV3S1A0A5B6 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
TCRBV3S1A0A5B6 SNORA8-201ENST00000384574 139 ntBASIC1.09□□□□□ -2.23
TCRBV3S1A0A5B6 RNU6-748P-201ENST00000384648 107 ntBASIC1.09□□□□□ -2.23
TCRBV3S1A0A5B6 ZNF92P1Y-201ENST00000415010 1191 ntBASIC1.09□□□□□ -2.23
TCRBV3S1A0A5B6 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.09□□□□□ -2.23
TCRBV3S1A0A5B6 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.09□□□□□ -2.23
TCRBV3S1A0A5B6 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC1.09□□□□□ -2.23
TCRBV3S1A0A5B6 AL049734.2-201ENST00000441066 616 ntBASIC1.09□□□□□ -2.23
TCRBV3S1A0A5B6 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC1.09□□□□□ -2.23
TCRBV3S1A0A5B6 AC092902.1-201ENST00000486999 259 ntBASIC1.09□□□□□ -2.23
TCRBV3S1A0A5B6 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.09□□□□□ -2.23
TCRBV3S1A0A5B6 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC1.09□□□□□ -2.23
TCRBV3S1A0A5B6 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC1.09□□□□□ -2.23
TCRBV3S1A0A5B6 AC010486.1-201ENST00000511793 424 ntBASIC1.09□□□□□ -2.23
TCRBV3S1A0A5B6 AC093752.1-206ENST00000511823 336 ntBASIC1.09□□□□□ -2.23
TCRBV3S1A0A5B6 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.09□□□□□ -2.23
TCRBV3S1A0A5B6 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
TCRBV3S1A0A5B6 AC027104.1-201ENST00000563702 681 ntBASIC1.09□□□□□ -2.23
TCRBV3S1A0A5B6 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.09□□□□□ -2.23
TCRBV3S1A0A5B6 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.09□□□□□ -2.23
TCRBV3S1A0A5B6 PRR13P7-201ENST00000605538 430 ntBASIC1.09□□□□□ -2.23
TCRBV3S1A0A5B6 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.09□□□□□ -2.23
TCRBV3S1A0A5B6 AC119674.1-220ENST00000641502 1048 ntBASIC1.09□□□□□ -2.23
TCRBV3S1A0A5B6 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
TCRBV3S1A0A5B6 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
TCRBV3S1A0A5B6 ZNF209P-201ENST00000593450 2304 ntBASIC1.08□□□□□ -2.24
TCRBV3S1A0A5B6 RNU6-1339P-201ENST00000363574 91 ntBASIC1.08□□□□□ -2.24
TCRBV3S1A0A5B6 BTF3L4P2-201ENST00000392798 346 ntBASIC1.08□□□□□ -2.24
TCRBV3S1A0A5B6 RNU2-49P-201ENST00000410666 184 ntBASIC1.08□□□□□ -2.24
TCRBV3S1A0A5B6 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC1.08□□□□□ -2.24
TCRBV3S1A0A5B6 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.08□□□□□ -2.24
TCRBV3S1A0A5B6 AC233981.1-201ENST00000423224 461 ntBASIC1.08□□□□□ -2.24
TCRBV3S1A0A5B6 AC092047.1-201ENST00000424997 240 ntBASIC1.08□□□□□ -2.24
TCRBV3S1A0A5B6 RPL31P54-201ENST00000429803 370 ntBASIC1.08□□□□□ -2.24
TCRBV3S1A0A5B6 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC1.08□□□□□ -2.24
TCRBV3S1A0A5B6 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC1.08□□□□□ -2.24
TCRBV3S1A0A5B6 SNORD97-201ENST00000459187 142 ntBASIC1.08□□□□□ -2.24
TCRBV3S1A0A5B6 AC138853.1-201ENST00000503549 823 ntBASIC1.08□□□□□ -2.24
TCRBV3S1A0A5B6 AC093767.1-201ENST00000504523 156 ntBASIC1.08□□□□□ -2.24
TCRBV3S1A0A5B6 AC113420.1-201ENST00000507903 571 ntBASIC1.08□□□□□ -2.24
TCRBV3S1A0A5B6 AF213884.2-201ENST00000510417 903 ntBASIC1.08□□□□□ -2.24
TCRBV3S1A0A5B6 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.08□□□□□ -2.24
TCRBV3S1A0A5B6 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.08□□□□□ -2.24
TCRBV3S1A0A5B6 RNU1-41P-201ENST00000516161 162 ntBASIC1.08□□□□□ -2.24
TCRBV3S1A0A5B6 RNU1-48P-201ENST00000516400 162 ntBASIC1.08□□□□□ -2.24
TCRBV3S1A0A5B6 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.08□□□□□ -2.24
TCRBV3S1A0A5B6 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.08□□□□□ -2.24
TCRBV3S1A0A5B6 LSM6P2-201ENST00000552208 177 ntBASIC1.08□□□□□ -2.24
TCRBV3S1A0A5B6 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.08□□□□□ -2.24
TCRBV3S1A0A5B6 AC023043.2-201ENST00000589678 1026 ntBASIC1.08□□□□□ -2.24
TCRBV3S1A0A5B6 BNIP3P25-201ENST00000596023 559 ntBASIC1.08□□□□□ -2.24
TCRBV3S1A0A5B6 BNIP3P4-201ENST00000604946 565 ntBASIC1.08□□□□□ -2.24
TCRBV3S1A0A5B6 AC016925.2-201ENST00000605108 242 ntBASIC1.08□□□□□ -2.24
TCRBV3S1A0A5B6 MIR6130-201ENST00000619419 109 ntBASIC1.08□□□□□ -2.24
TCRBV3S1A0A5B6 LINC02211-204ENST00000642024 1070 ntBASIC1.08□□□□□ -2.24
TCRBV3S1A0A5B6 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
TCRBV3S1A0A5B6 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
TCRBV3S1A0A5B6 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
TCRBV3S1A0A5B6 SNORA70B-201ENST00000384210 135 ntBASIC1.07□□□□□ -2.24
TCRBV3S1A0A5B6 UBE2FP1-201ENST00000416536 447 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms