Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 SNHG22-203ENST00000617833 660 ntBASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 AC009159.1-201ENST00000618386 642 ntBASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 AC007494.3-201ENST00000624660 743 ntBASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 MIR22-201ENST00000362190 85 ntBASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 RNU6-140P-201ENST00000384566 108 ntBASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 MIR767-201ENST00000390228 109 ntBASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 SNORD115.1-201ENST00000391109 76 ntBASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 RPL21P75-201ENST00000396599 483 ntBASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 MIR888-201ENST00000401186 77 ntBASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 RPL21P28-201ENST00000401418 483 ntBASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 AL592114.1-201ENST00000403842 483 ntBASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 AL353777.1-201ENST00000425552 326 ntBASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 AL358075.3-201ENST00000426289 226 ntBASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 MED14P1-201ENST00000430517 648 ntBASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 AC108059.3-201ENST00000456388 214 ntBASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 RPL21P39-201ENST00000463605 483 ntBASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 RPL21P93-201ENST00000480465 489 ntBASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 AC233702.1-201ENST00000482905 502 ntBASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 AC087190.1-201ENST00000484462 480 ntBASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 AC093591.1-201ENST00000491435 481 ntBASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 RPL21P16-201ENST00000495531 483 ntBASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 MTND5P13-201ENST00000513046 1079 ntBASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 RNU6-927P-201ENST00000516199 100 ntBASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 AC025881.1-201ENST00000518851 512 ntBASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 OSBPL9P5-201ENST00000542581 171 ntBASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 AC107016.2-201ENST00000547968 190 ntBASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 AC109446.2-201ENST00000567872 497 ntBASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 AL356432.3-201ENST00000568952 465 ntBASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 MIR4506-201ENST00000584693 77 ntBASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 AC078899.3-201ENST00000599065 212 ntBASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 AC010620.2-201ENST00000600135 313 ntBASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 AC025811.1-201ENST00000604312 472 ntBASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 AC027807.2-201ENST00000616099 408 ntBASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 AC104010.1-201ENST00000616889 150 ntBASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.98□□□□□ -1.93
PCDHGA1Q9Y5H4 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 RNU5A-8P-201ENST00000364102 114 ntBASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 SNORD56.5-201ENST00000364281 72 ntBASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 SNORD116-8-201ENST00000384365 95 ntBASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 MTCYBP36-201ENST00000404146 440 ntBASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 RNA5SP184-201ENST00000411071 108 ntBASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 RNA5SP107-201ENST00000411358 122 ntBASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 AL590639.1-201ENST00000456484 337 ntBASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 BET1P1-201ENST00000482276 359 ntBASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 LARP1BP2-201ENST00000486594 519 ntBASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 AC112204.1-201ENST00000502591 103 ntBASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 AF131216.2-201ENST00000512316 564 ntBASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 MTCO1P47-201ENST00000523889 1271 ntBASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 AC123904.3-201ENST00000547218 814 ntBASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 MIR5697-201ENST00000578045 78 ntBASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 AC104984.5-201ENST00000586878 94 ntBASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 AC008739.2-201ENST00000597006 317 ntBASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 AC105129.3-201ENST00000605455 485 ntBASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 FTX_3.1-201ENST00000610451 147 ntBASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 AC245517.5-201ENST00000611529 162 ntBASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 AC100793.4-201ENST00000613683 429 ntBASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 AC078883.4-201ENST00000623218 367 ntBASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.97□□□□□ -1.93
PCDHGA1Q9Y5H4 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms