Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
PCDHGA9Q9Y5G4 AL157871.3-201ENST00000557231 293 ntBASIC3.96□□□□□ -1.78
PCDHGA9Q9Y5G4 CYP4A43P-201ENST00000568156 121 ntBASIC3.96□□□□□ -1.78
PCDHGA9Q9Y5G4 AC005261.5-201ENST00000596280 355 ntBASIC3.96□□□□□ -1.78
PCDHGA9Q9Y5G4 AC092747.3-201ENST00000603769 301 ntBASIC3.96□□□□□ -1.78
PCDHGA9Q9Y5G4 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
PCDHGA9Q9Y5G4 AC009248.2-201ENST00000619826 254 ntBASIC3.96□□□□□ -1.78
PCDHGA9Q9Y5G4 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
PCDHGA9Q9Y5G4 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
PCDHGA9Q9Y5G4 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PCDHGA9Q9Y5G4 MTND4P35-201ENST00000604257 1375 ntBASIC3.96□□□□□ -1.78
PCDHGA9Q9Y5G4 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PCDHGA9Q9Y5G4 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.96□□□□□ -1.78
PCDHGA9Q9Y5G4 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
PCDHGA9Q9Y5G4 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
PCDHGA9Q9Y5G4 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PCDHGA9Q9Y5G4 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
PCDHGA9Q9Y5G4 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 HSPA8P4-201ENST00000511877 1920 ntBASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 ZNF285B-201ENST00000561698 1767 ntBASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 RNU1-15P-201ENST00000353977 144 ntBASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 Y_RNA.33-201ENST00000362591 102 ntBASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 Y_RNA.70-201ENST00000362886 110 ntBASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 SNORD113-7-201ENST00000363762 77 ntBASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 RNU1-63P-201ENST00000383902 164 ntBASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 RNA5SP171-201ENST00000391071 115 ntBASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 RPL21P65-201ENST00000406094 466 ntBASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 AL591034.1-201ENST00000407447 340 ntBASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 SNORA74C-2-201ENST00000411179 201 ntBASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 RPS20P14-201ENST00000412545 360 ntBASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 YPEL5P1-201ENST00000419731 367 ntBASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 AL645937.1-202ENST00000421799 937 ntBASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 AL158156.1-201ENST00000422509 473 ntBASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 AL365400.1-201ENST00000431854 640 ntBASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 AL512844.2-201ENST00000433990 593 ntBASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 AC007389.2-201ENST00000434630 306 ntBASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 NDUFA5P4-201ENST00000436704 385 ntBASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 PRPS1P1-201ENST00000445305 876 ntBASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 AC091951.2-201ENST00000500762 203 ntBASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 CCDC34P1-201ENST00000507441 517 ntBASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 AC008716.1-201ENST00000511084 513 ntBASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 RNU2-69P-201ENST00000516061 100 ntBASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 RPL7P20-201ENST00000520308 745 ntBASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 CYCSP27-201ENST00000527643 293 ntBASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 HMGB1P14-201ENST00000557424 591 ntBASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 AC091135.1-201ENST00000585943 307 ntBASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 VN1R80P-201ENST00000597126 338 ntBASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 MIR6075-201ENST00000620782 95 ntBASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 AL136221.1-201ENST00000621449 509 ntBASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 AP003400.5-201ENST00000624827 617 ntBASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHGA9Q9Y5G4 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHGA9Q9Y5G4 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.94□□□□□ -1.78
PCDHGA9Q9Y5G4 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHGA9Q9Y5G4 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHGA9Q9Y5G4 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
PCDHGA9Q9Y5G4 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
PCDHGA9Q9Y5G4 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHGA9Q9Y5G4 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
PCDHGA9Q9Y5G4 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHGA9Q9Y5G4 RNA5SP130-201ENST00000364431 114 ntBASIC3.94□□□□□ -1.78
PCDHGA9Q9Y5G4 Y_RNA.378-201ENST00000365652 113 ntBASIC3.94□□□□□ -1.78
PCDHGA9Q9Y5G4 SNORA32.2-201ENST00000384049 122 ntBASIC3.94□□□□□ -1.78
PCDHGA9Q9Y5G4 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.94□□□□□ -1.78
PCDHGA9Q9Y5G4 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHGA9Q9Y5G4 RNA5SP36-201ENST00000410197 133 ntBASIC3.94□□□□□ -1.78
PCDHGA9Q9Y5G4 RNU2-68P-201ENST00000410878 191 ntBASIC3.94□□□□□ -1.78
PCDHGA9Q9Y5G4 CYCSP19-201ENST00000411715 316 ntBASIC3.94□□□□□ -1.78
PCDHGA9Q9Y5G4 MTND3P8-201ENST00000412909 339 ntBASIC3.94□□□□□ -1.78
PCDHGA9Q9Y5G4 BX682237.1-201ENST00000415016 335 ntBASIC3.94□□□□□ -1.78
PCDHGA9Q9Y5G4 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.94□□□□□ -1.78
PCDHGA9Q9Y5G4 AL669831.1-202ENST00000428504 417 ntBASIC3.94□□□□□ -1.78
PCDHGA9Q9Y5G4 RPL23AP69-201ENST00000431134 458 ntBASIC3.94□□□□□ -1.78
PCDHGA9Q9Y5G4 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.94□□□□□ -1.78
PCDHGA9Q9Y5G4 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.94□□□□□ -1.78
PCDHGA9Q9Y5G4 GTF2IP13-201ENST00000438487 386 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms