Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 AC096920.1-201ENST00000423991 241 ntBASIC1.97□□□□□ -2.09
CHTOPQ9Y3Y2 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.97□□□□□ -2.09
CHTOPQ9Y3Y2 MTCO2P25-201ENST00000447065 681 ntBASIC1.97□□□□□ -2.09
CHTOPQ9Y3Y2 AC017099.1-201ENST00000448261 1028 ntBASIC1.97□□□□□ -2.09
CHTOPQ9Y3Y2 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.97□□□□□ -2.09
CHTOPQ9Y3Y2 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.97□□□□□ -2.09
CHTOPQ9Y3Y2 snoU109.1-201ENST00000459339 135 ntBASIC1.97□□□□□ -2.09
CHTOPQ9Y3Y2 MEMO1P3-201ENST00000459811 302 ntBASIC1.97□□□□□ -2.09
CHTOPQ9Y3Y2 SRIP1-201ENST00000489235 288 ntBASIC1.97□□□□□ -2.09
CHTOPQ9Y3Y2 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.97□□□□□ -2.09
CHTOPQ9Y3Y2 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC1.97□□□□□ -2.09
CHTOPQ9Y3Y2 RNU6-581P-201ENST00000516214 105 ntBASIC1.97□□□□□ -2.09
CHTOPQ9Y3Y2 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.97□□□□□ -2.09
CHTOPQ9Y3Y2 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC1.97□□□□□ -2.09
CHTOPQ9Y3Y2 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC1.97□□□□□ -2.09
CHTOPQ9Y3Y2 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC1.97□□□□□ -2.09
CHTOPQ9Y3Y2 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.97□□□□□ -2.09
CHTOPQ9Y3Y2 ZNF861P-201ENST00000588126 639 ntBASIC1.97□□□□□ -2.09
CHTOPQ9Y3Y2 AC087045.1-201ENST00000605856 382 ntBASIC1.97□□□□□ -2.09
CHTOPQ9Y3Y2 AC103710.1-201ENST00000610003 901 ntBASIC1.97□□□□□ -2.09
CHTOPQ9Y3Y2 MIR6798-201ENST00000612887 67 ntBASIC1.97□□□□□ -2.09
CHTOPQ9Y3Y2 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
CHTOPQ9Y3Y2 AC018692.3-201ENST00000623929 123 ntBASIC1.97□□□□□ -2.09
CHTOPQ9Y3Y2 AC097655.1-201ENST00000635075 318 ntBASIC1.97□□□□□ -2.09
CHTOPQ9Y3Y2 ZNF285B-201ENST00000561698 1767 ntBASIC1.97□□□□□ -2.09
CHTOPQ9Y3Y2 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC1.96□□□□□ -2.09
CHTOPQ9Y3Y2 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC1.96□□□□□ -2.1
CHTOPQ9Y3Y2 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CHTOPQ9Y3Y2 RNA5SP50-201ENST00000363731 107 ntBASIC1.96□□□□□ -2.1
CHTOPQ9Y3Y2 RNU6-1280P-201ENST00000365211 107 ntBASIC1.96□□□□□ -2.1
CHTOPQ9Y3Y2 AL356057.3-201ENST00000402607 340 ntBASIC1.96□□□□□ -2.1
CHTOPQ9Y3Y2 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.96□□□□□ -2.1
CHTOPQ9Y3Y2 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.96□□□□□ -2.1
CHTOPQ9Y3Y2 USP9YP21-201ENST00000420603 432 ntBASIC1.96□□□□□ -2.1
CHTOPQ9Y3Y2 ISCA1P1-201ENST00000426679 387 ntBASIC1.96□□□□□ -2.1
CHTOPQ9Y3Y2 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC1.96□□□□□ -2.1
CHTOPQ9Y3Y2 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.96□□□□□ -2.1
CHTOPQ9Y3Y2 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CHTOPQ9Y3Y2 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.96□□□□□ -2.1
CHTOPQ9Y3Y2 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CHTOPQ9Y3Y2 AC112771.1-201ENST00000463581 102 ntBASIC1.96□□□□□ -2.1
CHTOPQ9Y3Y2 AC109925.1-201ENST00000478069 331 ntBASIC1.96□□□□□ -2.1
CHTOPQ9Y3Y2 RPS3AP43-201ENST00000479743 781 ntBASIC1.96□□□□□ -2.1
CHTOPQ9Y3Y2 AC079203.1-201ENST00000487972 404 ntBASIC1.96□□□□□ -2.1
CHTOPQ9Y3Y2 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.96□□□□□ -2.1
CHTOPQ9Y3Y2 SNORA26.10-201ENST00000516427 141 ntBASIC1.96□□□□□ -2.1
CHTOPQ9Y3Y2 SNORA48.11-201ENST00000517015 89 ntBASIC1.96□□□□□ -2.1
CHTOPQ9Y3Y2 RANP3-201ENST00000530970 276 ntBASIC1.96□□□□□ -2.1
CHTOPQ9Y3Y2 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.96□□□□□ -2.1
CHTOPQ9Y3Y2 PSMA3P-201ENST00000555485 635 ntBASIC1.96□□□□□ -2.1
CHTOPQ9Y3Y2 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC1.96□□□□□ -2.1
CHTOPQ9Y3Y2 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC1.96□□□□□ -2.1
CHTOPQ9Y3Y2 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC1.96□□□□□ -2.1
CHTOPQ9Y3Y2 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.96□□□□□ -2.1
CHTOPQ9Y3Y2 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC1.96□□□□□ -2.1
CHTOPQ9Y3Y2 AL021368.1-201ENST00000607490 540 ntBASIC1.96□□□□□ -2.1
CHTOPQ9Y3Y2 AC109809.1-201ENST00000619665 545 ntBASIC1.96□□□□□ -2.1
CHTOPQ9Y3Y2 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.96□□□□□ -2.1
CHTOPQ9Y3Y2 AP000676.3-201ENST00000623299 569 ntBASIC1.96□□□□□ -2.1
CHTOPQ9Y3Y2 PCMTD1P7-201ENST00000634506 357 ntBASIC1.96□□□□□ -2.1
CHTOPQ9Y3Y2 AC116618.1-201ENST00000634617 774 ntBASIC1.96□□□□□ -2.1
CHTOPQ9Y3Y2 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.96□□□□□ -2.1
CHTOPQ9Y3Y2 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CHTOPQ9Y3Y2 DDX43P2-201ENST00000604753 1354 ntBASIC1.96□□□□□ -2.1
CHTOPQ9Y3Y2 AC104454.1-201ENST00000421341 1401 ntBASIC1.95□□□□□ -2.1
CHTOPQ9Y3Y2 AC138393.1-203ENST00000327086 343 ntBASIC1.95□□□□□ -2.1
CHTOPQ9Y3Y2 RNU6-289P-201ENST00000364093 107 ntBASIC1.95□□□□□ -2.1
CHTOPQ9Y3Y2 RNU6-853P-201ENST00000364306 107 ntBASIC1.95□□□□□ -2.1
CHTOPQ9Y3Y2 RNU6-512P-201ENST00000364438 103 ntBASIC1.95□□□□□ -2.1
CHTOPQ9Y3Y2 SNORA62.3-201ENST00000365110 153 ntBASIC1.95□□□□□ -2.1
CHTOPQ9Y3Y2 SNORA5A-201ENST00000384111 134 ntBASIC1.95□□□□□ -2.1
CHTOPQ9Y3Y2 MIR554-201ENST00000384874 96 ntBASIC1.95□□□□□ -2.1
CHTOPQ9Y3Y2 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CHTOPQ9Y3Y2 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CHTOPQ9Y3Y2 RNA5SP450-201ENST00000411206 102 ntBASIC1.95□□□□□ -2.1
CHTOPQ9Y3Y2 RAB9AP3-201ENST00000412737 573 ntBASIC1.95□□□□□ -2.1
CHTOPQ9Y3Y2 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.95□□□□□ -2.1
CHTOPQ9Y3Y2 ZNF90P2-204ENST00000419323 1075 ntBASIC1.95□□□□□ -2.1
CHTOPQ9Y3Y2 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC1.95□□□□□ -2.1
CHTOPQ9Y3Y2 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.95□□□□□ -2.1
CHTOPQ9Y3Y2 AC013262.1-201ENST00000426710 252 ntBASIC1.95□□□□□ -2.1
CHTOPQ9Y3Y2 AC092017.2-201ENST00000427600 362 ntBASIC1.95□□□□□ -2.1
CHTOPQ9Y3Y2 AL035246.1-201ENST00000433554 1255 ntBASIC1.95□□□□□ -2.1
CHTOPQ9Y3Y2 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.95□□□□□ -2.1
CHTOPQ9Y3Y2 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.95□□□□□ -2.1
CHTOPQ9Y3Y2 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC1.95□□□□□ -2.1
CHTOPQ9Y3Y2 RAB9AP1-201ENST00000449393 573 ntBASIC1.95□□□□□ -2.1
CHTOPQ9Y3Y2 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.95□□□□□ -2.1
CHTOPQ9Y3Y2 AC117440.1-201ENST00000474107 571 ntBASIC1.95□□□□□ -2.1
CHTOPQ9Y3Y2 RPL23AP49-201ENST00000492925 468 ntBASIC1.95□□□□□ -2.1
CHTOPQ9Y3Y2 AC034222.1-201ENST00000494052 532 ntBASIC1.95□□□□□ -2.1
CHTOPQ9Y3Y2 AC113347.3-201ENST00000509113 148 ntBASIC1.95□□□□□ -2.1
CHTOPQ9Y3Y2 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.95□□□□□ -2.1
CHTOPQ9Y3Y2 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.95□□□□□ -2.1
CHTOPQ9Y3Y2 AC011611.1-201ENST00000552179 197 ntBASIC1.95□□□□□ -2.1
CHTOPQ9Y3Y2 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.95□□□□□ -2.1
CHTOPQ9Y3Y2 DUXAP1-201ENST00000556632 463 ntBASIC1.95□□□□□ -2.1
CHTOPQ9Y3Y2 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC1.95□□□□□ -2.1
CHTOPQ9Y3Y2 AC034105.4-201ENST00000568304 277 ntBASIC1.95□□□□□ -2.1
CHTOPQ9Y3Y2 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms