Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 RN7SL432P-201ENST00000484057 298 ntBASIC2.11□□□□□ -2.07
RHBDD3Q9Y3P4 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
RHBDD3Q9Y3P4 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.11□□□□□ -2.07
RHBDD3Q9Y3P4 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.11□□□□□ -2.07
RHBDD3Q9Y3P4 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.11□□□□□ -2.07
RHBDD3Q9Y3P4 RNU6-150P-201ENST00000516237 95 ntBASIC2.11□□□□□ -2.07
RHBDD3Q9Y3P4 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
RHBDD3Q9Y3P4 AL138976.2-201ENST00000563989 694 ntBASIC2.11□□□□□ -2.07
RHBDD3Q9Y3P4 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.11□□□□□ -2.07
RHBDD3Q9Y3P4 MIR4765-201ENST00000585007 77 ntBASIC2.11□□□□□ -2.07
RHBDD3Q9Y3P4 AC078899.2-201ENST00000595282 212 ntBASIC2.11□□□□□ -2.07
RHBDD3Q9Y3P4 BNIP3P26-201ENST00000600827 554 ntBASIC2.11□□□□□ -2.07
RHBDD3Q9Y3P4 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
RHBDD3Q9Y3P4 AC011939.3-201ENST00000613686 466 ntBASIC2.11□□□□□ -2.07
RHBDD3Q9Y3P4 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.11□□□□□ -2.07
RHBDD3Q9Y3P4 U4.3-201ENST00000621047 82 ntBASIC2.11□□□□□ -2.07
RHBDD3Q9Y3P4 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
RHBDD3Q9Y3P4 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.11□□□□□ -2.07
RHBDD3Q9Y3P4 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
RHBDD3Q9Y3P4 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
RHBDD3Q9Y3P4 FAM133CP-201ENST00000332869 704 ntBASIC2.1□□□□□ -2.07
RHBDD3Q9Y3P4 RNU1-51P-201ENST00000365345 176 ntBASIC2.1□□□□□ -2.07
RHBDD3Q9Y3P4 RNU6-744P-201ENST00000365557 107 ntBASIC2.1□□□□□ -2.07
RHBDD3Q9Y3P4 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
RHBDD3Q9Y3P4 Y_RNA.408-201ENST00000383987 102 ntBASIC2.1□□□□□ -2.07
RHBDD3Q9Y3P4 RNU6-1316P-201ENST00000384242 108 ntBASIC2.1□□□□□ -2.07
RHBDD3Q9Y3P4 SNORA80E-201ENST00000384744 137 ntBASIC2.1□□□□□ -2.07
RHBDD3Q9Y3P4 MIR518C-201ENST00000384822 101 ntBASIC2.1□□□□□ -2.07
RHBDD3Q9Y3P4 MIR218-1-201ENST00000384999 110 ntBASIC2.1□□□□□ -2.07
RHBDD3Q9Y3P4 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.1□□□□□ -2.07
RHBDD3Q9Y3P4 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.1□□□□□ -2.07
RHBDD3Q9Y3P4 AL953862.1-201ENST00000423016 168 ntBASIC2.1□□□□□ -2.07
RHBDD3Q9Y3P4 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.1□□□□□ -2.07
RHBDD3Q9Y3P4 AL513328.1-201ENST00000446460 224 ntBASIC2.1□□□□□ -2.07
RHBDD3Q9Y3P4 HMGN2P10-201ENST00000448085 265 ntBASIC2.1□□□□□ -2.07
RHBDD3Q9Y3P4 RPS15AP36-201ENST00000492022 382 ntBASIC2.1□□□□□ -2.07
RHBDD3Q9Y3P4 AC107222.1-201ENST00000510899 637 ntBASIC2.1□□□□□ -2.07
RHBDD3Q9Y3P4 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.1□□□□□ -2.07
RHBDD3Q9Y3P4 RNA5SP112-201ENST00000515937 99 ntBASIC2.1□□□□□ -2.07
RHBDD3Q9Y3P4 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.1□□□□□ -2.07
RHBDD3Q9Y3P4 AC021739.1-201ENST00000559631 174 ntBASIC2.1□□□□□ -2.07
RHBDD3Q9Y3P4 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.1□□□□□ -2.07
RHBDD3Q9Y3P4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.1□□□□□ -2.07
RHBDD3Q9Y3P4 AC090186.1-201ENST00000605991 572 ntBASIC2.1□□□□□ -2.07
RHBDD3Q9Y3P4 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.1□□□□□ -2.07
RHBDD3Q9Y3P4 AC067747.1-201ENST00000608026 250 ntBASIC2.1□□□□□ -2.07
RHBDD3Q9Y3P4 DUSP12P1-201ENST00000612874 516 ntBASIC2.1□□□□□ -2.07
RHBDD3Q9Y3P4 MIR6817-201ENST00000615588 66 ntBASIC2.1□□□□□ -2.07
RHBDD3Q9Y3P4 AC123767.1-202ENST00000620407 817 ntBASIC2.1□□□□□ -2.07
RHBDD3Q9Y3P4 HSPA8P4-201ENST00000511877 1920 ntBASIC2.1□□□□□ -2.07
RHBDD3Q9Y3P4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
RHBDD3Q9Y3P4 AL359854.1-201ENST00000614203 1594 ntBASIC2.1□□□□□ -2.07
RHBDD3Q9Y3P4 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.1□□□□□ -2.07
RHBDD3Q9Y3P4 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
RHBDD3Q9Y3P4 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 ADAM3A-203ENST00000461344 2157 ntBASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 RNU6-1167P-201ENST00000363227 94 ntBASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 RNA5SP68-201ENST00000363885 119 ntBASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 RNA5SP125-201ENST00000364843 120 ntBASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 SNORA41-201ENST00000384675 132 ntBASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 PAXBP1P1-201ENST00000449315 447 ntBASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 AC072039.1-201ENST00000477611 581 ntBASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 AC004924.1-201ENST00000480160 781 ntBASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 AC016550.1-201ENST00000505348 785 ntBASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 AC112673.1-201ENST00000513168 575 ntBASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 RNY4P37-201ENST00000516225 96 ntBASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 RNU1-103P-201ENST00000516502 125 ntBASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 RNA5SP148-201ENST00000516527 94 ntBASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 UBTFL10-201ENST00000528532 562 ntBASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 AC092451.2-201ENST00000538746 658 ntBASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 ISCA1P3-201ENST00000577104 373 ntBASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 AC068620.3-201ENST00000602749 560 ntBASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 AC009090.3-201ENST00000616553 565 ntBASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 PISRT1-201ENST00000626175 531 ntBASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
RHBDD3Q9Y3P4 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
RHBDD3Q9Y3P4 RNU6-560P-201ENST00000364007 108 ntBASIC2.08□□□□□ -2.08
RHBDD3Q9Y3P4 RNU6-621P-201ENST00000364752 109 ntBASIC2.08□□□□□ -2.08
RHBDD3Q9Y3P4 RNU6-1257P-201ENST00000384625 110 ntBASIC2.08□□□□□ -2.08
RHBDD3Q9Y3P4 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 145.9 ms