Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RNA5SP311-201ENST00000411290 116 ntBASIC5.8□□□□□ -1.48
ZC3H4Q9UPT8 AP000275.1-201ENST00000411943 390 ntBASIC5.8□□□□□ -1.48
ZC3H4Q9UPT8 AC140479.3-201ENST00000418944 1126 ntBASIC5.8□□□□□ -1.48
ZC3H4Q9UPT8 AC096920.1-201ENST00000423991 241 ntBASIC5.8□□□□□ -1.48
ZC3H4Q9UPT8 AC004383.1-201ENST00000438135 289 ntBASIC5.8□□□□□ -1.48
ZC3H4Q9UPT8 H2AFZP5-201ENST00000446960 382 ntBASIC5.8□□□□□ -1.48
ZC3H4Q9UPT8 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.8□□□□□ -1.48
ZC3H4Q9UPT8 AC133134.1-201ENST00000466800 359 ntBASIC5.8□□□□□ -1.48
ZC3H4Q9UPT8 RPS15AP34-201ENST00000487776 387 ntBASIC5.8□□□□□ -1.48
ZC3H4Q9UPT8 RNA5SP315-201ENST00000516340 116 ntBASIC5.8□□□□□ -1.48
ZC3H4Q9UPT8 RNA5SP312-201ENST00000517068 116 ntBASIC5.8□□□□□ -1.48
ZC3H4Q9UPT8 AC126177.3-201ENST00000551839 688 ntBASIC5.8□□□□□ -1.48
ZC3H4Q9UPT8 AL121932.1-201ENST00000605542 214 ntBASIC5.8□□□□□ -1.48
ZC3H4Q9UPT8 MIR4275-201ENST00000636486 87 ntBASIC5.8□□□□□ -1.48
ZC3H4Q9UPT8 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
ZC3H4Q9UPT8 AP001148.1-201ENST00000624124 2359 ntBASIC5.8□□□□□ -1.48
ZC3H4Q9UPT8 PRO1804-201ENST00000623780 2050 ntBASIC5.8□□□□□ -1.48
ZC3H4Q9UPT8 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.8□□□□□ -1.48
ZC3H4Q9UPT8 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
ZC3H4Q9UPT8 AL356489.2-201ENST00000566968 3528 ntBASIC5.8□□□□□ -1.48
ZC3H4Q9UPT8 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
ZC3H4Q9UPT8 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ZC3H4Q9UPT8 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 AL391987.6-201ENST00000305671 199 ntBASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 RNU1-76P-201ENST00000362903 159 ntBASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 Y_RNA.237-201ENST00000364439 102 ntBASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 RNU6-1317P-201ENST00000364582 104 ntBASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 RNU6-708P-201ENST00000384217 107 ntBASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 RNU6-611P-201ENST00000384276 104 ntBASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 MIR670-201ENST00000390142 98 ntBASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 SNORA48.4-201ENST00000391089 134 ntBASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 RNU6-1203P-201ENST00000410703 110 ntBASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 RNU6-607P-201ENST00000411283 108 ntBASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 EI24P1-201ENST00000416584 867 ntBASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 OR2AH1P-201ENST00000425717 928 ntBASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 RPS29P17-201ENST00000430795 166 ntBASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 CKS1BP5-201ENST00000434172 273 ntBASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 AL450023.3-201ENST00000440592 271 ntBASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 RANP8-201ENST00000444720 713 ntBASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 AL392103.1-201ENST00000447000 198 ntBASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 SNORA31.3-201ENST00000516029 96 ntBASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 SNORA31.9-201ENST00000516429 84 ntBASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 AP003730.1-201ENST00000524605 285 ntBASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 NDUFB4P11-201ENST00000560510 395 ntBASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 IPO5P1-202ENST00000600039 287 ntBASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 ARF4P1-201ENST00000605447 541 ntBASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 AC123912.5-201ENST00000605470 343 ntBASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 AC004792.1-201ENST00000614523 137 ntBASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 AP001282.2-201ENST00000616149 309 ntBASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 MFSD8-242ENST00000641690 4199 ntBASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 AP001273.1-201ENST00000624493 3152 ntBASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 ZNF299P-201ENST00000406845 1804 ntBASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 AC139769.1-204ENST00000472297 1931 ntBASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.79□□□□□ -1.48
ZC3H4Q9UPT8 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
ZC3H4Q9UPT8 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.78□□□□□ -1.48
ZC3H4Q9UPT8 Y_RNA.84-201ENST00000363011 104 ntBASIC5.78□□□□□ -1.48
ZC3H4Q9UPT8 Y_RNA.274-201ENST00000364714 101 ntBASIC5.78□□□□□ -1.48
ZC3H4Q9UPT8 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
ZC3H4Q9UPT8 AL591034.2-201ENST00000402839 359 ntBASIC5.78□□□□□ -1.48
ZC3H4Q9UPT8 U3.42-201ENST00000408746 214 ntBASIC5.78□□□□□ -1.48
ZC3H4Q9UPT8 RNU6-712P-201ENST00000410558 100 ntBASIC5.78□□□□□ -1.48
ZC3H4Q9UPT8 RNU6-130P-201ENST00000411112 103 ntBASIC5.78□□□□□ -1.48
ZC3H4Q9UPT8 RPL7AP73-201ENST00000413490 353 ntBASIC5.78□□□□□ -1.48
ZC3H4Q9UPT8 AL645608.4-201ENST00000423619 154 ntBASIC5.78□□□□□ -1.48
ZC3H4Q9UPT8 AL159987.2-201ENST00000432754 307 ntBASIC5.78□□□□□ -1.48
ZC3H4Q9UPT8 AC004938.1-201ENST00000438468 308 ntBASIC5.78□□□□□ -1.48
ZC3H4Q9UPT8 NDUFB1P2-201ENST00000449477 176 ntBASIC5.78□□□□□ -1.48
ZC3H4Q9UPT8 RPS17P2-201ENST00000461663 408 ntBASIC5.78□□□□□ -1.48
ZC3H4Q9UPT8 UQCRHP4-201ENST00000471686 272 ntBASIC5.78□□□□□ -1.48
ZC3H4Q9UPT8 AC008958.1-201ENST00000511047 682 ntBASIC5.78□□□□□ -1.48
ZC3H4Q9UPT8 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC5.78□□□□□ -1.48
ZC3H4Q9UPT8 FKBP1BP1-201ENST00000553366 325 ntBASIC5.78□□□□□ -1.48
ZC3H4Q9UPT8 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.78□□□□□ -1.48
ZC3H4Q9UPT8 AC005951.2-201ENST00000576282 495 ntBASIC5.78□□□□□ -1.48
ZC3H4Q9UPT8 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC5.78□□□□□ -1.48
ZC3H4Q9UPT8 PRPF19P1-201ENST00000584766 898 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms