Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 AC009901.1-201ENST00000506703 541 ntBASIC5.32□□□□□ -1.56
BRPF3Q9ULD4 AC026782.1-201ENST00000512952 449 ntBASIC5.32□□□□□ -1.56
BRPF3Q9ULD4 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.32□□□□□ -1.56
BRPF3Q9ULD4 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
BRPF3Q9ULD4 AC026371.1-201ENST00000551867 419 ntBASIC5.32□□□□□ -1.56
BRPF3Q9ULD4 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.32□□□□□ -1.56
BRPF3Q9ULD4 AL360157.1-201ENST00000565962 87 ntBASIC5.32□□□□□ -1.56
BRPF3Q9ULD4 RPL23AP87-202ENST00000573039 466 ntBASIC5.32□□□□□ -1.56
BRPF3Q9ULD4 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
BRPF3Q9ULD4 AL138721.1-201ENST00000616756 179 ntBASIC5.32□□□□□ -1.56
BRPF3Q9ULD4 Xist_exon1.1-201ENST00000618930 85 ntBASIC5.32□□□□□ -1.56
BRPF3Q9ULD4 7SK.10-201ENST00000621414 298 ntBASIC5.32□□□□□ -1.56
BRPF3Q9ULD4 AC092608.2-201ENST00000624427 218 ntBASIC5.32□□□□□ -1.56
BRPF3Q9ULD4 CPHL1P-201ENST00000461341 3407 ntBASIC5.32□□□□□ -1.56
BRPF3Q9ULD4 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
BRPF3Q9ULD4 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
BRPF3Q9ULD4 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
BRPF3Q9ULD4 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC5.32□□□□□ -1.56
BRPF3Q9ULD4 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
BRPF3Q9ULD4 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.32□□□□□ -1.56
BRPF3Q9ULD4 A2MP1-204ENST00000566278 4130 ntBASIC5.32□□□□□ -1.56
BRPF3Q9ULD4 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.31□□□□□ -1.56
BRPF3Q9ULD4 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
BRPF3Q9ULD4 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC5.31□□□□□ -1.56
BRPF3Q9ULD4 RNA5SP505-201ENST00000364748 108 ntBASIC5.31□□□□□ -1.56
BRPF3Q9ULD4 RNA5SP22-201ENST00000365393 109 ntBASIC5.31□□□□□ -1.56
BRPF3Q9ULD4 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
BRPF3Q9ULD4 SNORA36C-201ENST00000384289 132 ntBASIC5.31□□□□□ -1.56
BRPF3Q9ULD4 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
BRPF3Q9ULD4 Y_RNA.594-201ENST00000410373 140 ntBASIC5.31□□□□□ -1.56
BRPF3Q9ULD4 AC018865.2-201ENST00000423631 129 ntBASIC5.31□□□□□ -1.56
BRPF3Q9ULD4 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.31□□□□□ -1.56
BRPF3Q9ULD4 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC5.31□□□□□ -1.56
BRPF3Q9ULD4 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.31□□□□□ -1.56
BRPF3Q9ULD4 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.31□□□□□ -1.56
BRPF3Q9ULD4 RPL21P41-201ENST00000459863 264 ntBASIC5.31□□□□□ -1.56
BRPF3Q9ULD4 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
BRPF3Q9ULD4 AL135752.1-201ENST00000479477 471 ntBASIC5.31□□□□□ -1.56
BRPF3Q9ULD4 AC092451.1-201ENST00000480211 153 ntBASIC5.31□□□□□ -1.56
BRPF3Q9ULD4 TAF8-207ENST00000482432 556 ntTSL 2 BASIC5.31□□□□□ -1.56
BRPF3Q9ULD4 Y_RNA.670-201ENST00000516255 105 ntBASIC5.31□□□□□ -1.56
BRPF3Q9ULD4 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
BRPF3Q9ULD4 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC5.31□□□□□ -1.56
BRPF3Q9ULD4 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.31□□□□□ -1.56
BRPF3Q9ULD4 AC025423.5-201ENST00000550230 219 ntBASIC5.31□□□□□ -1.56
BRPF3Q9ULD4 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.31□□□□□ -1.56
BRPF3Q9ULD4 AC025946.2-201ENST00000603398 234 ntBASIC5.31□□□□□ -1.56
BRPF3Q9ULD4 AC018462.2-201ENST00000605375 395 ntBASIC5.31□□□□□ -1.56
BRPF3Q9ULD4 AC023043.4-201ENST00000612081 449 ntBASIC5.31□□□□□ -1.56
BRPF3Q9ULD4 DLEU2_5.1-201ENST00000615567 84 ntBASIC5.31□□□□□ -1.56
BRPF3Q9ULD4 AC010205.1-201ENST00000616668 449 ntBASIC5.31□□□□□ -1.56
BRPF3Q9ULD4 AL132822.1-201ENST00000617063 513 ntBASIC5.31□□□□□ -1.56
BRPF3Q9ULD4 AC015967.1-201ENST00000619893 476 ntBASIC5.31□□□□□ -1.56
BRPF3Q9ULD4 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
BRPF3Q9ULD4 USP8P1-201ENST00000494673 3183 ntBASIC5.31□□□□□ -1.56
BRPF3Q9ULD4 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.31□□□□□ -1.56
BRPF3Q9ULD4 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
BRPF3Q9ULD4 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
BRPF3Q9ULD4 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.31□□□□□ -1.56
BRPF3Q9ULD4 AC125257.1-201ENST00000560400 2930 ntBASIC5.3□□□□□ -1.56
BRPF3Q9ULD4 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
BRPF3Q9ULD4 MTND5P1-201ENST00000445440 1375 ntBASIC5.3□□□□□ -1.56
BRPF3Q9ULD4 AC009812.4-201ENST00000569134 1805 ntBASIC5.3□□□□□ -1.56
BRPF3Q9ULD4 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.3□□□□□ -1.56
BRPF3Q9ULD4 RN7SKP115-201ENST00000363177 317 ntBASIC5.3□□□□□ -1.56
BRPF3Q9ULD4 RNU6-371P-201ENST00000364283 108 ntBASIC5.3□□□□□ -1.56
BRPF3Q9ULD4 Y_RNA.404-201ENST00000383978 102 ntBASIC5.3□□□□□ -1.56
BRPF3Q9ULD4 RNU6-214P-201ENST00000384130 107 ntBASIC5.3□□□□□ -1.56
BRPF3Q9ULD4 Y_RNA.473-201ENST00000384333 102 ntBASIC5.3□□□□□ -1.56
BRPF3Q9ULD4 AL590139.1-201ENST00000416267 400 ntBASIC5.3□□□□□ -1.56
BRPF3Q9ULD4 MCFD2P1-201ENST00000417812 300 ntBASIC5.3□□□□□ -1.56
BRPF3Q9ULD4 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.3□□□□□ -1.56
BRPF3Q9ULD4 RPEP3-201ENST00000425462 676 ntBASIC5.3□□□□□ -1.56
BRPF3Q9ULD4 RPL21P23-201ENST00000446654 460 ntBASIC5.3□□□□□ -1.56
BRPF3Q9ULD4 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
BRPF3Q9ULD4 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
BRPF3Q9ULD4 CEACAMP4-201ENST00000457676 421 ntBASIC5.3□□□□□ -1.56
BRPF3Q9ULD4 AC146944.2-203ENST00000502493 354 ntBASIC5.3□□□□□ -1.56
BRPF3Q9ULD4 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.3□□□□□ -1.56
BRPF3Q9ULD4 VN1R104P-201ENST00000505115 1009 ntBASIC5.3□□□□□ -1.56
BRPF3Q9ULD4 AC139495.1-202ENST00000513164 354 ntBASIC5.3□□□□□ -1.56
BRPF3Q9ULD4 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC5.3□□□□□ -1.56
BRPF3Q9ULD4 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.3□□□□□ -1.56
BRPF3Q9ULD4 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.3□□□□□ -1.56
BRPF3Q9ULD4 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.3□□□□□ -1.56
BRPF3Q9ULD4 AC091178.1-203ENST00000584586 279 ntBASIC5.3□□□□□ -1.56
BRPF3Q9ULD4 SNRPGP15-201ENST00000600149 222 ntBASIC5.3□□□□□ -1.56
BRPF3Q9ULD4 AC002044.1-201ENST00000606707 158 ntBASIC5.3□□□□□ -1.56
BRPF3Q9ULD4 AC011890.2-201ENST00000613393 294 ntBASIC5.3□□□□□ -1.56
BRPF3Q9ULD4 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.3□□□□□ -1.56
BRPF3Q9ULD4 PLCE1P1-201ENST00000622094 305 ntBASIC5.3□□□□□ -1.56
BRPF3Q9ULD4 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
BRPF3Q9ULD4 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
BRPF3Q9ULD4 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
BRPF3Q9ULD4 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
BRPF3Q9ULD4 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
BRPF3Q9ULD4 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.3□□□□□ -1.56
BRPF3Q9ULD4 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
BRPF3Q9ULD4 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC5.29□□□□□ -1.56
BRPF3Q9ULD4 MTND5P30-201ENST00000452896 1731 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms