Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.87□□□□□ -1.63
DDX41Q9UJV9 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
DDX41Q9UJV9 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.86□□□□□ -1.63
DDX41Q9UJV9 AC007390.2-201ENST00000606229 3803 ntBASIC4.86□□□□□ -1.63
DDX41Q9UJV9 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
DDX41Q9UJV9 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
DDX41Q9UJV9 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
DDX41Q9UJV9 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
DDX41Q9UJV9 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
DDX41Q9UJV9 Y_RNA.480-201ENST00000384364 102 ntBASIC4.86□□□□□ -1.63
DDX41Q9UJV9 RNU1-44P-201ENST00000384453 163 ntBASIC4.86□□□□□ -1.63
DDX41Q9UJV9 MIR548K-201ENST00000408406 116 ntBASIC4.86□□□□□ -1.63
DDX41Q9UJV9 MIR548F5-201ENST00000408421 86 ntBASIC4.86□□□□□ -1.63
DDX41Q9UJV9 RNA5SP36-201ENST00000410197 133 ntBASIC4.86□□□□□ -1.63
DDX41Q9UJV9 SNORA74C-2-201ENST00000411179 201 ntBASIC4.86□□□□□ -1.63
DDX41Q9UJV9 RPL37P10-201ENST00000412884 288 ntBASIC4.86□□□□□ -1.63
DDX41Q9UJV9 NDUFB4P7-201ENST00000423198 363 ntBASIC4.86□□□□□ -1.63
DDX41Q9UJV9 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.86□□□□□ -1.63
DDX41Q9UJV9 AC005534.2-201ENST00000431047 433 ntBASIC4.86□□□□□ -1.63
DDX41Q9UJV9 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.86□□□□□ -1.63
DDX41Q9UJV9 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.86□□□□□ -1.63
DDX41Q9UJV9 RPS20P22-201ENST00000473700 357 ntBASIC4.86□□□□□ -1.63
DDX41Q9UJV9 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
DDX41Q9UJV9 AC012181.1-201ENST00000479895 423 ntBASIC4.86□□□□□ -1.63
DDX41Q9UJV9 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.86□□□□□ -1.63
DDX41Q9UJV9 RNA5SP73-201ENST00000516744 108 ntBASIC4.86□□□□□ -1.63
DDX41Q9UJV9 RNU6-1153P-201ENST00000516760 105 ntBASIC4.86□□□□□ -1.63
DDX41Q9UJV9 RNU6-1088P-201ENST00000516850 104 ntBASIC4.86□□□□□ -1.63
DDX41Q9UJV9 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.86□□□□□ -1.63
DDX41Q9UJV9 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.86□□□□□ -1.63
DDX41Q9UJV9 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.86□□□□□ -1.63
DDX41Q9UJV9 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.86□□□□□ -1.63
DDX41Q9UJV9 MIR3672-201ENST00000584290 82 ntBASIC4.86□□□□□ -1.63
DDX41Q9UJV9 AC093227.2-201ENST00000589357 285 ntBASIC4.86□□□□□ -1.63
DDX41Q9UJV9 AC012119.1-201ENST00000603184 222 ntBASIC4.86□□□□□ -1.63
DDX41Q9UJV9 AC010201.1-201ENST00000605051 540 ntBASIC4.86□□□□□ -1.63
DDX41Q9UJV9 AC245389.1-201ENST00000605141 529 ntBASIC4.86□□□□□ -1.63
DDX41Q9UJV9 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
DDX41Q9UJV9 AL133215.3-201ENST00000609801 448 ntBASIC4.86□□□□□ -1.63
DDX41Q9UJV9 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.86□□□□□ -1.63
DDX41Q9UJV9 AC103858.2-201ENST00000621471 543 ntBASIC4.86□□□□□ -1.63
DDX41Q9UJV9 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.86□□□□□ -1.63
DDX41Q9UJV9 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
DDX41Q9UJV9 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
DDX41Q9UJV9 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
DDX41Q9UJV9 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
DDX41Q9UJV9 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.85□□□□□ -1.63
DDX41Q9UJV9 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.85□□□□□ -1.63
DDX41Q9UJV9 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
DDX41Q9UJV9 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
DDX41Q9UJV9 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
DDX41Q9UJV9 Y_RNA.259-201ENST00000364619 101 ntBASIC4.85□□□□□ -1.63
DDX41Q9UJV9 RNU6-128P-201ENST00000383976 107 ntBASIC4.85□□□□□ -1.63
DDX41Q9UJV9 Y_RNA.419-201ENST00000384041 102 ntBASIC4.85□□□□□ -1.63
DDX41Q9UJV9 Y_RNA.534-201ENST00000384599 112 ntBASIC4.85□□□□□ -1.63
DDX41Q9UJV9 RPL21P90-201ENST00000415692 466 ntBASIC4.85□□□□□ -1.63
DDX41Q9UJV9 AL356095.1-201ENST00000417217 199 ntBASIC4.85□□□□□ -1.63
DDX41Q9UJV9 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.85□□□□□ -1.63
DDX41Q9UJV9 MTCO2P12-201ENST00000427426 682 ntBASIC4.85□□□□□ -1.63
DDX41Q9UJV9 SNAP23P1-201ENST00000433229 246 ntBASIC4.85□□□□□ -1.63
DDX41Q9UJV9 HSPD1P21-201ENST00000436541 245 ntBASIC4.85□□□□□ -1.63
DDX41Q9UJV9 HSFY6P-201ENST00000445573 403 ntBASIC4.85□□□□□ -1.63
DDX41Q9UJV9 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.85□□□□□ -1.63
DDX41Q9UJV9 SNORD19B-201ENST00000459623 84 ntBASIC4.85□□□□□ -1.63
DDX41Q9UJV9 MTND4P17-201ENST00000470444 350 ntBASIC4.85□□□□□ -1.63
DDX41Q9UJV9 AL592156.1-201ENST00000508758 304 ntBASIC4.85□□□□□ -1.63
DDX41Q9UJV9 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.85□□□□□ -1.63
DDX41Q9UJV9 RNU6-1256P-201ENST00000516539 103 ntBASIC4.85□□□□□ -1.63
DDX41Q9UJV9 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.85□□□□□ -1.63
DDX41Q9UJV9 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.85□□□□□ -1.63
DDX41Q9UJV9 MIR548AC-201ENST00000585049 88 ntBASIC4.85□□□□□ -1.63
DDX41Q9UJV9 POLR3GP2-201ENST00000588366 668 ntBASIC4.85□□□□□ -1.63
DDX41Q9UJV9 AC023043.2-201ENST00000589678 1026 ntBASIC4.85□□□□□ -1.63
DDX41Q9UJV9 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.85□□□□□ -1.63
DDX41Q9UJV9 AC098826.3-201ENST00000603823 466 ntBASIC4.85□□□□□ -1.63
DDX41Q9UJV9 APOOP1-201ENST00000604695 592 ntBASIC4.85□□□□□ -1.63
DDX41Q9UJV9 AC012603.1-201ENST00000606424 528 ntBASIC4.85□□□□□ -1.63
DDX41Q9UJV9 AC007546.2-201ENST00000623996 360 ntBASIC4.85□□□□□ -1.63
DDX41Q9UJV9 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
DDX41Q9UJV9 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.85□□□□□ -1.63
DDX41Q9UJV9 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.85□□□□□ -1.63
DDX41Q9UJV9 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
DDX41Q9UJV9 ZNF962P-201ENST00000443465 3140 ntBASIC4.85□□□□□ -1.63
DDX41Q9UJV9 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
DDX41Q9UJV9 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
DDX41Q9UJV9 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
DDX41Q9UJV9 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.84□□□□□ -1.63
DDX41Q9UJV9 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
DDX41Q9UJV9 FRG1CP-201ENST00000358464 769 ntBASIC4.84□□□□□ -1.63
DDX41Q9UJV9 RNU6-512P-201ENST00000364438 103 ntBASIC4.84□□□□□ -1.63
DDX41Q9UJV9 Y_RNA.339-201ENST00000365325 102 ntBASIC4.84□□□□□ -1.63
DDX41Q9UJV9 AC063979.1-201ENST00000415539 377 ntBASIC4.84□□□□□ -1.63
DDX41Q9UJV9 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.84□□□□□ -1.63
DDX41Q9UJV9 RPL21P109-201ENST00000422213 475 ntBASIC4.84□□□□□ -1.63
DDX41Q9UJV9 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.84□□□□□ -1.63
DDX41Q9UJV9 AL592045.1-201ENST00000429867 352 ntBASIC4.84□□□□□ -1.63
DDX41Q9UJV9 COX6B1P7-201ENST00000430845 235 ntBASIC4.84□□□□□ -1.63
DDX41Q9UJV9 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.84□□□□□ -1.63
DDX41Q9UJV9 RPL23AP81-201ENST00000455252 467 ntBASIC4.84□□□□□ -1.63
DDX41Q9UJV9 AP000873.1-201ENST00000463987 400 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 182 ms