Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AL008629.1-201ENST00000438615 184 ntBASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 HSPE1P6-201ENST00000479457 291 ntBASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 RPL30P5-201ENST00000494923 336 ntBASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 RNA5SP282-201ENST00000516355 108 ntBASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 RPPH1-2P-201ENST00000516688 293 ntBASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 AP001981.2-201ENST00000603241 418 ntBASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 AL158211.4-201ENST00000606988 584 ntBASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 AC027309.3-201ENST00000623419 351 ntBASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 AC103706.2-201ENST00000638080 240 ntBASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 AP000776.1-201ENST00000530032 1663 ntBASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 AC092104.1-201ENST00000497346 1441 ntBASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 RNA5SP126-201ENST00000365092 109 ntBASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 DEFA7P-201ENST00000382676 285 ntBASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 TPMTP3-201ENST00000411928 735 ntBASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 SEPT2P1-201ENST00000419651 180 ntBASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 RPS25P9-201ENST00000435591 252 ntBASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 MTCYBP39-201ENST00000437562 491 ntBASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 RPL30P9-201ENST00000465586 330 ntBASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 AC034244.1-201ENST00000507687 207 ntBASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 AC010587.2-201ENST00000511727 448 ntBASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 RAC1P5-201ENST00000512182 576 ntBASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 AC024589.1-201ENST00000512207 263 ntBASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 CASP1P1-201ENST00000526345 212 ntBASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 AP003497.1-201ENST00000528472 562 ntBASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 AC022880.1-201ENST00000534017 973 ntBASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 HMGB1P14-201ENST00000557424 591 ntBASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 AC027176.1-201ENST00000560204 514 ntBASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 DEFB131E-202ENST00000602581 683 ntBASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 AC135507.1-201ENST00000607214 561 ntBASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 TUSC7.1-201ENST00000610969 165 ntBASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 AC092447.10-201ENST00000620607 1652 ntBASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 ZNF519P1-201ENST00000449011 1626 ntBASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CLIP2Q9UDT6 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.03□□□□□ -1.92
CLIP2Q9UDT6 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.03□□□□□ -1.92
CLIP2Q9UDT6 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CLIP2Q9UDT6 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CLIP2Q9UDT6 RNU5A-1-201ENST00000362698 116 ntBASIC3.03□□□□□ -1.92
CLIP2Q9UDT6 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CLIP2Q9UDT6 USP9YP33-201ENST00000412220 421 ntBASIC3.03□□□□□ -1.92
CLIP2Q9UDT6 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.03□□□□□ -1.92
CLIP2Q9UDT6 HMGB1P49-201ENST00000418882 569 ntBASIC3.03□□□□□ -1.92
CLIP2Q9UDT6 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.03□□□□□ -1.92
CLIP2Q9UDT6 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.03□□□□□ -1.92
CLIP2Q9UDT6 AL356867.1-201ENST00000429623 299 ntBASIC3.03□□□□□ -1.92
CLIP2Q9UDT6 AC092573.2-201ENST00000434546 243 ntBASIC3.03□□□□□ -1.92
CLIP2Q9UDT6 USP9YP35-201ENST00000435696 412 ntBASIC3.03□□□□□ -1.92
CLIP2Q9UDT6 MTCO2P16-201ENST00000436962 677 ntBASIC3.03□□□□□ -1.92
CLIP2Q9UDT6 COX7BP2-201ENST00000437976 242 ntBASIC3.03□□□□□ -1.92
CLIP2Q9UDT6 AC011816.1-201ENST00000441346 546 ntBASIC3.03□□□□□ -1.92
CLIP2Q9UDT6 TAF9P1-201ENST00000445421 515 ntBASIC3.03□□□□□ -1.92
CLIP2Q9UDT6 TAF9P2-201ENST00000454958 515 ntBASIC3.03□□□□□ -1.92
CLIP2Q9UDT6 AC010099.1-201ENST00000455434 375 ntBASIC3.03□□□□□ -1.92
CLIP2Q9UDT6 AC027673.1-201ENST00000456245 405 ntBASIC3.03□□□□□ -1.92
CLIP2Q9UDT6 MEMO1P3-201ENST00000459811 302 ntBASIC3.03□□□□□ -1.92
CLIP2Q9UDT6 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CLIP2Q9UDT6 AF213884.2-201ENST00000510417 903 ntBASIC3.03□□□□□ -1.92
CLIP2Q9UDT6 SNORA3.4-201ENST00000515969 96 ntBASIC3.03□□□□□ -1.92
CLIP2Q9UDT6 RNU6-798P-201ENST00000516912 103 ntBASIC3.03□□□□□ -1.92
CLIP2Q9UDT6 AC025881.1-201ENST00000518851 512 ntBASIC3.03□□□□□ -1.92
CLIP2Q9UDT6 AC100870.1-201ENST00000522035 505 ntBASIC3.03□□□□□ -1.92
CLIP2Q9UDT6 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.03□□□□□ -1.92
CLIP2Q9UDT6 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.03□□□□□ -1.92
CLIP2Q9UDT6 AC023050.2-201ENST00000544968 387 ntBASIC3.03□□□□□ -1.92
CLIP2Q9UDT6 AC027807.1-201ENST00000559921 996 ntBASIC3.03□□□□□ -1.92
CLIP2Q9UDT6 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.03□□□□□ -1.92
CLIP2Q9UDT6 AC010620.2-201ENST00000600135 313 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 140.3 ms