Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AL589994.2-201ENST00000621124 579 ntBASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 RNU6-1115P-201ENST00000362490 106 ntBASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 Y_RNA.158-201ENST00000363651 101 ntBASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 RNU6-946P-201ENST00000383878 107 ntBASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 RNU6-213P-201ENST00000384051 104 ntBASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 Y_RNA.452-201ENST00000384202 108 ntBASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 HDGFP1-201ENST00000405943 252 ntBASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 MCFD2P1-201ENST00000417812 300 ntBASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 AL691449.1-201ENST00000426570 421 ntBASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 CALM2P2-201ENST00000428512 440 ntBASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 RPL21P112-201ENST00000434403 463 ntBASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 RPL7P28-201ENST00000437739 740 ntBASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 AC006011.1-201ENST00000442758 349 ntBASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 AL645939.1-201ENST00000453429 797 ntBASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 snoU109.4-201ENST00000458953 143 ntBASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 DYNLL1P5-201ENST00000467158 270 ntBASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 RN7SL432P-201ENST00000484057 298 ntBASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 MTCO2P24-201ENST00000515611 426 ntBASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 CR383656.7-201ENST00000548164 174 ntBASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 AC110588.1-201ENST00000559699 137 ntBASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 AC004817.2-201ENST00000561794 651 ntBASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 AC008269.2-201ENST00000561915 1105 ntBASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 AC008162.1-201ENST00000604718 254 ntBASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 AL670379.4-201ENST00000605279 254 ntBASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 FAM157A-202ENST00000615155 405 ntBASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 MIR7154-201ENST00000620673 73 ntBASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 AC119674.1-207ENST00000641355 633 ntBASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 AC027287.1-201ENST00000553115 1453 ntBASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 AC066616.2-201ENST00000559334 1481 ntBASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 AL031595.2-201ENST00000624215 19071 ntBASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDLIM7Q9NR12 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
PDLIM7Q9NR12 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
PDLIM7Q9NR12 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PDLIM7Q9NR12 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.59□□□□□ -1.67
PDLIM7Q9NR12 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
PDLIM7Q9NR12 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PDLIM7Q9NR12 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PDLIM7Q9NR12 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
PDLIM7Q9NR12 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PDLIM7Q9NR12 SMIM11P1-201ENST00000369586 178 ntBASIC4.59□□□□□ -1.67
PDLIM7Q9NR12 RNU6-505P-201ENST00000384427 107 ntBASIC4.59□□□□□ -1.67
PDLIM7Q9NR12 SNORD70.1-201ENST00000391007 85 ntBASIC4.59□□□□□ -1.67
PDLIM7Q9NR12 MRPL42P3-201ENST00000401492 326 ntBASIC4.59□□□□□ -1.67
PDLIM7Q9NR12 MIR548F4-201ENST00000408515 105 ntBASIC4.59□□□□□ -1.67
PDLIM7Q9NR12 KPNA2P1-201ENST00000458289 1591 ntBASIC4.59□□□□□ -1.67
PDLIM7Q9NR12 snoU13.3-201ENST00000459441 104 ntBASIC4.59□□□□□ -1.67
PDLIM7Q9NR12 AC100870.1-201ENST00000522035 505 ntBASIC4.59□□□□□ -1.67
PDLIM7Q9NR12 ZNF285B-201ENST00000561698 1767 ntBASIC4.59□□□□□ -1.67
PDLIM7Q9NR12 RPL23AP84-201ENST00000571193 464 ntBASIC4.59□□□□□ -1.67
PDLIM7Q9NR12 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.59□□□□□ -1.67
PDLIM7Q9NR12 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.59□□□□□ -1.67
PDLIM7Q9NR12 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.59□□□□□ -1.67
PDLIM7Q9NR12 AL355598.1-201ENST00000604169 202 ntBASIC4.59□□□□□ -1.67
PDLIM7Q9NR12 SNHG22-203ENST00000617833 660 ntBASIC4.59□□□□□ -1.67
PDLIM7Q9NR12 AC010378.1-201ENST00000619270 362 ntBASIC4.59□□□□□ -1.67
PDLIM7Q9NR12 AC022418.1-201ENST00000624118 445 ntBASIC4.59□□□□□ -1.67
PDLIM7Q9NR12 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.59□□□□□ -1.67
PDLIM7Q9NR12 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.59□□□□□ -1.67
PDLIM7Q9NR12 MAPK10-320ENST00000641462 6696 ntBASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 AC116667.1-201ENST00000604855 2072 ntBASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 RNU6-562P-201ENST00000362731 107 ntBASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 RNU6-989P-201ENST00000362756 107 ntBASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 SNORA75B-201ENST00000384053 137 ntBASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 RNU6-1032P-201ENST00000384100 107 ntBASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 RNU6-890P-201ENST00000384121 107 ntBASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 AL391417.1-201ENST00000404100 426 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms