Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 AP003485.1-201ENST00000625093 753 ntBASIC1.96□□□□□ -2.1
VCX3AQ9NNX9 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.96□□□□□ -2.1
VCX3AQ9NNX9 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
VCX3AQ9NNX9 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 RNU6-525P-201ENST00000363685 104 ntBASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 AL139397.2-201ENST00000404529 772 ntBASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 CIR1P3-201ENST00000405137 479 ntBASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 AL590084.1-201ENST00000407885 387 ntBASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 MTND4P3-201ENST00000417829 541 ntBASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 BX276092.3-201ENST00000424182 230 ntBASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 RPS3AP44-201ENST00000425466 790 ntBASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 ARL5AP4-201ENST00000430731 512 ntBASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 FABP5P14-201ENST00000437273 393 ntBASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 MTCO3P45-201ENST00000443036 613 ntBASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 AL591719.1-201ENST00000444669 744 ntBASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 RNA5SP233-201ENST00000459153 113 ntBASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 MTND5P13-201ENST00000513046 1079 ntBASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 RNU6-927P-201ENST00000516199 100 ntBASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 RNU6-390P-201ENST00000516259 103 ntBASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 DEFB131D-201ENST00000526803 184 ntBASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 AC005832.3-201ENST00000537929 631 ntBASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 AC006199.1-201ENST00000548728 219 ntBASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 NACAP3-201ENST00000552100 481 ntBASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 AL136520.1-202ENST00000555494 763 ntBASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 AC106785.1-201ENST00000565935 262 ntBASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 AC021171.1-201ENST00000603137 706 ntBASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 AC091152.3-201ENST00000604227 325 ntBASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 YPEL5P2-201ENST00000605553 359 ntBASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
VCX3AQ9NNX9 RNU6-234P-201ENST00000365229 104 ntBASIC1.94□□□□□ -2.1
VCX3AQ9NNX9 RNU6-744P-201ENST00000365557 107 ntBASIC1.94□□□□□ -2.1
VCX3AQ9NNX9 RNU6-224P-201ENST00000384055 107 ntBASIC1.94□□□□□ -2.1
VCX3AQ9NNX9 RNU6-1316P-201ENST00000384242 108 ntBASIC1.94□□□□□ -2.1
VCX3AQ9NNX9 MIR518C-201ENST00000384822 101 ntBASIC1.94□□□□□ -2.1
VCX3AQ9NNX9 SNORA40.2-201ENST00000390847 128 ntBASIC1.94□□□□□ -2.1
VCX3AQ9NNX9 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC1.94□□□□□ -2.1
VCX3AQ9NNX9 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC1.94□□□□□ -2.1
VCX3AQ9NNX9 AL024507.1-201ENST00000412741 274 ntBASIC1.94□□□□□ -2.1
VCX3AQ9NNX9 RPL26P27-201ENST00000414397 437 ntBASIC1.94□□□□□ -2.1
VCX3AQ9NNX9 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.94□□□□□ -2.1
VCX3AQ9NNX9 HMGN2P19-201ENST00000425149 265 ntBASIC1.94□□□□□ -2.1
VCX3AQ9NNX9 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
VCX3AQ9NNX9 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
VCX3AQ9NNX9 AC105272.1-201ENST00000438604 198 ntBASIC1.94□□□□□ -2.1
VCX3AQ9NNX9 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC1.94□□□□□ -2.1
VCX3AQ9NNX9 HMGN2P10-201ENST00000448085 265 ntBASIC1.94□□□□□ -2.1
VCX3AQ9NNX9 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.94□□□□□ -2.1
VCX3AQ9NNX9 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.94□□□□□ -2.1
VCX3AQ9NNX9 AC055731.1-201ENST00000474387 401 ntBASIC1.94□□□□□ -2.1
VCX3AQ9NNX9 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC1.94□□□□□ -2.1
VCX3AQ9NNX9 AC234781.5-201ENST00000508429 271 ntBASIC1.94□□□□□ -2.1
VCX3AQ9NNX9 RNA5SP200-201ENST00000516360 103 ntBASIC1.94□□□□□ -2.1
VCX3AQ9NNX9 SNORA31.25-201ENST00000517242 134 ntBASIC1.94□□□□□ -2.1
VCX3AQ9NNX9 AC023538.1-201ENST00000534576 736 ntBASIC1.94□□□□□ -2.1
VCX3AQ9NNX9 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.94□□□□□ -2.1
VCX3AQ9NNX9 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.94□□□□□ -2.1
VCX3AQ9NNX9 CYCSP2-201ENST00000558168 301 ntBASIC1.94□□□□□ -2.1
VCX3AQ9NNX9 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.94□□□□□ -2.1
VCX3AQ9NNX9 AC007621.1-201ENST00000604544 437 ntBASIC1.94□□□□□ -2.1
VCX3AQ9NNX9 AC093732.2-201ENST00000607950 274 ntBASIC1.94□□□□□ -2.1
VCX3AQ9NNX9 AC124016.2-201ENST00000610058 665 ntBASIC1.94□□□□□ -2.1
VCX3AQ9NNX9 AC104763.3-201ENST00000613765 618 ntBASIC1.94□□□□□ -2.1
VCX3AQ9NNX9 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.94□□□□□ -2.1
VCX3AQ9NNX9 AC079416.3-201ENST00000624479 549 ntBASIC1.94□□□□□ -2.1
VCX3AQ9NNX9 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
VCX3AQ9NNX9 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.94□□□□□ -2.1
VCX3AQ9NNX9 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.94□□□□□ -2.1
VCX3AQ9NNX9 MTND5P29-201ENST00000458676 1807 ntBASIC1.94□□□□□ -2.1
VCX3AQ9NNX9 AC011477.1-204ENST00000623416 1325 ntBASIC1.93□□□□□ -2.1
VCX3AQ9NNX9 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.93□□□□□ -2.1
VCX3AQ9NNX9 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
VCX3AQ9NNX9 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.93□□□□□ -2.1
VCX3AQ9NNX9 U6atac.2-201ENST00000408644 118 ntBASIC1.93□□□□□ -2.1
VCX3AQ9NNX9 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC1.93□□□□□ -2.1
VCX3AQ9NNX9 TIMM9P2-201ENST00000419324 266 ntBASIC1.93□□□□□ -2.1
VCX3AQ9NNX9 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.93□□□□□ -2.1
VCX3AQ9NNX9 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.93□□□□□ -2.1
VCX3AQ9NNX9 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.93□□□□□ -2.1
VCX3AQ9NNX9 UBE2D3P1-201ENST00000436669 444 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms