Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 SNORA3.2-201ENST00000408221 125 ntBASIC2.56□□□□□ -2
TM9SF3Q9HD45 RNU2-49P-201ENST00000410666 184 ntBASIC2.56□□□□□ -2
TM9SF3Q9HD45 MTCO2P8-201ENST00000412213 658 ntBASIC2.56□□□□□ -2
TM9SF3Q9HD45 MTND1P21-201ENST00000412991 285 ntBASIC2.56□□□□□ -2
TM9SF3Q9HD45 MTCYBP38-201ENST00000417160 1123 ntBASIC2.56□□□□□ -2
TM9SF3Q9HD45 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.56□□□□□ -2
TM9SF3Q9HD45 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.56□□□□□ -2
TM9SF3Q9HD45 ATP5F1P1-201ENST00000433775 569 ntBASIC2.56□□□□□ -2
TM9SF3Q9HD45 PTENP1-201ENST00000447117 1215 ntBASIC2.56□□□□□ -2
TM9SF3Q9HD45 AC011753.1-201ENST00000451001 220 ntBASIC2.56□□□□□ -2
TM9SF3Q9HD45 BX322784.1-201ENST00000455793 1077 ntBASIC2.56□□□□□ -2
TM9SF3Q9HD45 AC097493.1-201ENST00000463958 372 ntBASIC2.56□□□□□ -2
TM9SF3Q9HD45 MRPL42P6-201ENST00000486397 371 ntBASIC2.56□□□□□ -2
TM9SF3Q9HD45 AC108729.1-201ENST00000487812 947 ntBASIC2.56□□□□□ -2
TM9SF3Q9HD45 AL160314.1-201ENST00000490836 438 ntBASIC2.56□□□□□ -2
TM9SF3Q9HD45 AC091951.3-201ENST00000504093 246 ntBASIC2.56□□□□□ -2
TM9SF3Q9HD45 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.56□□□□□ -2
TM9SF3Q9HD45 AC243972.3-201ENST00000539655 198 ntBASIC2.56□□□□□ -2
TM9SF3Q9HD45 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.56□□□□□ -2
TM9SF3Q9HD45 AL512347.1-201ENST00000566420 503 ntBASIC2.56□□□□□ -2
TM9SF3Q9HD45 AC005951.2-201ENST00000576282 495 ntBASIC2.56□□□□□ -2
TM9SF3Q9HD45 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.56□□□□□ -2
TM9SF3Q9HD45 AC239868.4-201ENST00000608318 671 ntBASIC2.56□□□□□ -2
TM9SF3Q9HD45 BX664608.1-201ENST00000610519 487 ntBASIC2.56□□□□□ -2
TM9SF3Q9HD45 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.56□□□□□ -2
TM9SF3Q9HD45 AC025594.3-201ENST00000613068 790 ntBASIC2.56□□□□□ -2
TM9SF3Q9HD45 AC010133.1-201ENST00000615809 842 ntBASIC2.56□□□□□ -2
TM9SF3Q9HD45 AC019226.1-201ENST00000625666 515 ntBASIC2.56□□□□□ -2
TM9SF3Q9HD45 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
TM9SF3Q9HD45 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
TM9SF3Q9HD45 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
TM9SF3Q9HD45 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TM9SF3Q9HD45 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.55□□□□□ -2
TM9SF3Q9HD45 RNU6-223P-201ENST00000362830 107 ntBASIC2.55□□□□□ -2
TM9SF3Q9HD45 RNU6-560P-201ENST00000364007 108 ntBASIC2.55□□□□□ -2
TM9SF3Q9HD45 RNU6-1207P-201ENST00000384343 107 ntBASIC2.55□□□□□ -2
TM9SF3Q9HD45 RNU6-920P-201ENST00000410926 92 ntBASIC2.55□□□□□ -2
TM9SF3Q9HD45 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.55□□□□□ -2
TM9SF3Q9HD45 HMGB1P9-201ENST00000429856 646 ntBASIC2.55□□□□□ -2
TM9SF3Q9HD45 MED14P1-201ENST00000430517 648 ntBASIC2.55□□□□□ -2
TM9SF3Q9HD45 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.55□□□□□ -2
TM9SF3Q9HD45 CR769767.1-201ENST00000436337 346 ntBASIC2.55□□□□□ -2
TM9SF3Q9HD45 RPL35AP22-201ENST00000436855 335 ntBASIC2.55□□□□□ -2
TM9SF3Q9HD45 AC007327.1-201ENST00000447461 264 ntBASIC2.55□□□□□ -2
TM9SF3Q9HD45 RPL12P25-201ENST00000455592 494 ntBASIC2.55□□□□□ -2
TM9SF3Q9HD45 MTND1P16-201ENST00000465177 898 ntBASIC2.55□□□□□ -2
TM9SF3Q9HD45 RPL30P9-201ENST00000465586 330 ntBASIC2.55□□□□□ -2
TM9SF3Q9HD45 AC104563.1-201ENST00000476147 376 ntBASIC2.55□□□□□ -2
TM9SF3Q9HD45 AC021382.1-201ENST00000483523 359 ntBASIC2.55□□□□□ -2
TM9SF3Q9HD45 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.55□□□□□ -2
TM9SF3Q9HD45 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.55□□□□□ -2
TM9SF3Q9HD45 AC006499.2-201ENST00000513470 337 ntBASIC2.55□□□□□ -2
TM9SF3Q9HD45 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.55□□□□□ -2
TM9SF3Q9HD45 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.55□□□□□ -2
TM9SF3Q9HD45 RNU6-150P-201ENST00000516237 95 ntBASIC2.55□□□□□ -2
TM9SF3Q9HD45 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.55□□□□□ -2
TM9SF3Q9HD45 AL353997.4-201ENST00000586196 166 ntBASIC2.55□□□□□ -2
TM9SF3Q9HD45 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.55□□□□□ -2
TM9SF3Q9HD45 BNIP3P26-201ENST00000600827 554 ntBASIC2.55□□□□□ -2
TM9SF3Q9HD45 AC006270.3-201ENST00000605967 1036 ntBASIC2.55□□□□□ -2
TM9SF3Q9HD45 AC004520.1-201ENST00000608362 1413 ntBASIC2.55□□□□□ -2
TM9SF3Q9HD45 AC005332.10-201ENST00000612725 619 ntBASIC2.55□□□□□ -2
TM9SF3Q9HD45 U4.3-201ENST00000621047 82 ntBASIC2.55□□□□□ -2
TM9SF3Q9HD45 AP002791.1-201ENST00000623291 381 ntBASIC2.55□□□□□ -2
TM9SF3Q9HD45 AL078595.3-201ENST00000623815 1166 ntBASIC2.55□□□□□ -2
TM9SF3Q9HD45 MIR203B-201ENST00000636080 86 ntBASIC2.55□□□□□ -2
TM9SF3Q9HD45 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.55□□□□□ -2
TM9SF3Q9HD45 ZNF271P-202ENST00000465539 1970 ntBASIC2.54□□□□□ -2
TM9SF3Q9HD45 AC080128.1-201ENST00000474389 1917 ntBASIC2.54□□□□□ -2
TM9SF3Q9HD45 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TM9SF3Q9HD45 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.54□□□□□ -2
TM9SF3Q9HD45 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TM9SF3Q9HD45 RNA5SP289-201ENST00000362332 137 ntBASIC2.54□□□□□ -2
TM9SF3Q9HD45 RNA5SP432-201ENST00000362480 116 ntBASIC2.54□□□□□ -2
TM9SF3Q9HD45 U8.2-201ENST00000363156 134 ntBASIC2.54□□□□□ -2
TM9SF3Q9HD45 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
TM9SF3Q9HD45 Y_RNA.465-201ENST00000384293 102 ntBASIC2.54□□□□□ -2
TM9SF3Q9HD45 RNU6-952P-201ENST00000391164 108 ntBASIC2.54□□□□□ -2
TM9SF3Q9HD45 RNU6-754P-201ENST00000391166 107 ntBASIC2.54□□□□□ -2
TM9SF3Q9HD45 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.54□□□□□ -2
TM9SF3Q9HD45 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.54□□□□□ -2
TM9SF3Q9HD45 AC007560.1-201ENST00000426912 237 ntBASIC2.54□□□□□ -2
TM9SF3Q9HD45 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.54□□□□□ -2
TM9SF3Q9HD45 ZYG11AP1-201ENST00000430329 837 ntBASIC2.54□□□□□ -2
TM9SF3Q9HD45 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.54□□□□□ -2
TM9SF3Q9HD45 MTCO2P20-201ENST00000437339 673 ntBASIC2.54□□□□□ -2
TM9SF3Q9HD45 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.54□□□□□ -2
TM9SF3Q9HD45 AC010095.1-201ENST00000443543 144 ntBASIC2.54□□□□□ -2
TM9SF3Q9HD45 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.54□□□□□ -2
TM9SF3Q9HD45 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
TM9SF3Q9HD45 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.54□□□□□ -2
TM9SF3Q9HD45 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.54□□□□□ -2
TM9SF3Q9HD45 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.54□□□□□ -2
TM9SF3Q9HD45 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.54□□□□□ -2
TM9SF3Q9HD45 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
TM9SF3Q9HD45 AC023141.11-201ENST00000508864 202 ntBASIC2.54□□□□□ -2
TM9SF3Q9HD45 AC116353.3-201ENST00000511215 249 ntBASIC2.54□□□□□ -2
TM9SF3Q9HD45 RN7SKP24-201ENST00000515888 284 ntBASIC2.54□□□□□ -2
TM9SF3Q9HD45 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.54□□□□□ -2
TM9SF3Q9HD45 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms