Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 AL138885.1-201ENST00000405921 675 ntBASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 ERMN-204ENST00000409925 556 ntTSL 4 BASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 AL445669.1-201ENST00000426743 755 ntBASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 FCF1P1-201ENST00000432690 571 ntBASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 RAB6C-AS1-202ENST00000433431 123 ntBASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 UBE2FP3-201ENST00000436366 524 ntBASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 RPS24P13-201ENST00000442520 397 ntBASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 AC011753.1-201ENST00000451001 220 ntBASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 RPL23AP35-201ENST00000451906 501 ntBASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 PRSS3P4-201ENST00000453323 162 ntBASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 CACYBPP2-201ENST00000453625 678 ntBASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 AP002812.1-201ENST00000495378 474 ntBASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 AC025881.1-201ENST00000518851 512 ntBASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 AP000907.2-201ENST00000530827 353 ntBASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 RPS3AP4-201ENST00000555161 764 ntBASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 MIR5571-201ENST00000577998 113 ntBASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 AL020997.2-201ENST00000602607 184 ntBASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 AC119501.1-201ENST00000603646 475 ntBASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 AL021997.1-201ENST00000605757 193 ntBASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 AC097468.3-201ENST00000607956 456 ntBASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 AC069294.1-201ENST00000608397 350 ntBASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 AC245884.12-201ENST00000615364 59 ntBASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 AP000484.1-201ENST00000620067 1252 ntBASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 AL355596.1-201ENST00000565399 3996 ntBASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC1.73□□□□□ -2.13
SND1-IT1Q9HBX3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SND1-IT1Q9HBX3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SND1-IT1Q9HBX3 UBE2L2-201ENST00000254302 429 ntBASIC1.72□□□□□ -2.13
SND1-IT1Q9HBX3 RPL21P132-201ENST00000331267 462 ntBASIC1.72□□□□□ -2.13
SND1-IT1Q9HBX3 RNU6-486P-201ENST00000363116 107 ntBASIC1.72□□□□□ -2.13
SND1-IT1Q9HBX3 U8.8-201ENST00000365399 135 ntBASIC1.72□□□□□ -2.13
SND1-IT1Q9HBX3 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
SND1-IT1Q9HBX3 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.72□□□□□ -2.13
SND1-IT1Q9HBX3 RNU6-817P-201ENST00000391083 104 ntBASIC1.72□□□□□ -2.13
SND1-IT1Q9HBX3 AL138827.1-201ENST00000402666 306 ntBASIC1.72□□□□□ -2.13
SND1-IT1Q9HBX3 NDUFS5P1-201ENST00000405668 289 ntBASIC1.72□□□□□ -2.13
SND1-IT1Q9HBX3 U6atac.2-201ENST00000408644 118 ntBASIC1.72□□□□□ -2.13
SND1-IT1Q9HBX3 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC1.72□□□□□ -2.13
SND1-IT1Q9HBX3 AL035407.1-201ENST00000429211 571 ntBASIC1.72□□□□□ -2.13
SND1-IT1Q9HBX3 AC236972.1-201ENST00000433225 199 ntBASIC1.72□□□□□ -2.13
SND1-IT1Q9HBX3 CR769767.1-201ENST00000436337 346 ntBASIC1.72□□□□□ -2.13
SND1-IT1Q9HBX3 AL161651.1-201ENST00000440882 223 ntBASIC1.72□□□□□ -2.13
SND1-IT1Q9HBX3 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.72□□□□□ -2.13
SND1-IT1Q9HBX3 AL139109.1-201ENST00000455491 297 ntBASIC1.72□□□□□ -2.13
SND1-IT1Q9HBX3 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.72□□□□□ -2.13
SND1-IT1Q9HBX3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.72□□□□□ -2.13
SND1-IT1Q9HBX3 UBE2V1P12-201ENST00000503954 474 ntBASIC1.72□□□□□ -2.13
SND1-IT1Q9HBX3 RPF2P2-201ENST00000504693 896 ntBASIC1.72□□□□□ -2.13
SND1-IT1Q9HBX3 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.72□□□□□ -2.13
SND1-IT1Q9HBX3 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.72□□□□□ -2.13
SND1-IT1Q9HBX3 AP004247.1-201ENST00000531556 1289 ntBASIC1.72□□□□□ -2.13
SND1-IT1Q9HBX3 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC1.72□□□□□ -2.13
SND1-IT1Q9HBX3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC1.72□□□□□ -2.13
SND1-IT1Q9HBX3 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.72□□□□□ -2.13
SND1-IT1Q9HBX3 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.72□□□□□ -2.13
SND1-IT1Q9HBX3 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC1.72□□□□□ -2.13
SND1-IT1Q9HBX3 MIR544B-201ENST00000582372 78 ntBASIC1.72□□□□□ -2.13
SND1-IT1Q9HBX3 MIR3158-1-201ENST00000583596 81 ntBASIC1.72□□□□□ -2.13
SND1-IT1Q9HBX3 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.72□□□□□ -2.13
SND1-IT1Q9HBX3 AC091152.3-201ENST00000604227 325 ntBASIC1.72□□□□□ -2.13
SND1-IT1Q9HBX3 BX323046.1-201ENST00000610145 535 ntBASIC1.72□□□□□ -2.13
SND1-IT1Q9HBX3 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.72□□□□□ -2.13
SND1-IT1Q9HBX3 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SND1-IT1Q9HBX3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.72□□□□□ -2.13
SND1-IT1Q9HBX3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC1.71□□□□□ -2.14
SND1-IT1Q9HBX3 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
SND1-IT1Q9HBX3 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SND1-IT1Q9HBX3 NACAP2-201ENST00000318548 624 ntBASIC1.71□□□□□ -2.14
SND1-IT1Q9HBX3 RNA5SP374-201ENST00000362939 125 ntBASIC1.71□□□□□ -2.14
SND1-IT1Q9HBX3 RNU6-433P-201ENST00000363216 104 ntBASIC1.71□□□□□ -2.14
SND1-IT1Q9HBX3 Y_RNA.126-201ENST00000363382 111 ntBASIC1.71□□□□□ -2.14
SND1-IT1Q9HBX3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.71□□□□□ -2.14
SND1-IT1Q9HBX3 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.71□□□□□ -2.14
SND1-IT1Q9HBX3 RNU6-658P-201ENST00000384606 106 ntBASIC1.71□□□□□ -2.14
SND1-IT1Q9HBX3 MIR7-3-201ENST00000384898 110 ntBASIC1.71□□□□□ -2.14
SND1-IT1Q9HBX3 RNU6-278P-201ENST00000390945 109 ntBASIC1.71□□□□□ -2.14
SND1-IT1Q9HBX3 RNU6-1242P-201ENST00000391052 103 ntBASIC1.71□□□□□ -2.14
SND1-IT1Q9HBX3 AL162578.1-201ENST00000406202 378 ntBASIC1.71□□□□□ -2.14
SND1-IT1Q9HBX3 RPS4XP7-201ENST00000406274 780 ntBASIC1.71□□□□□ -2.14
SND1-IT1Q9HBX3 RNU6-757P-201ENST00000410334 100 ntBASIC1.71□□□□□ -2.14
SND1-IT1Q9HBX3 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.71□□□□□ -2.14
SND1-IT1Q9HBX3 USP9YP6-201ENST00000413550 854 ntBASIC1.71□□□□□ -2.14
SND1-IT1Q9HBX3 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.71□□□□□ -2.14
SND1-IT1Q9HBX3 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 162.4 ms