Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 COX7A2P2-201ENST00000505291 250 ntBASIC3.36□□□□□ -1.87
UPF2Q9HAU5 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.36□□□□□ -1.87
UPF2Q9HAU5 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
UPF2Q9HAU5 AC006390.1-201ENST00000508068 283 ntBASIC3.36□□□□□ -1.87
UPF2Q9HAU5 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.36□□□□□ -1.87
UPF2Q9HAU5 TBCAP3-201ENST00000512475 312 ntBASIC3.36□□□□□ -1.87
UPF2Q9HAU5 AC091826.1-201ENST00000514065 313 ntBASIC3.36□□□□□ -1.87
UPF2Q9HAU5 AC022616.6-201ENST00000520479 119 ntBASIC3.36□□□□□ -1.87
UPF2Q9HAU5 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.36□□□□□ -1.87
UPF2Q9HAU5 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.36□□□□□ -1.87
UPF2Q9HAU5 H3F3AP1-201ENST00000559984 334 ntBASIC3.36□□□□□ -1.87
UPF2Q9HAU5 AC087481.2-201ENST00000565492 330 ntBASIC3.36□□□□□ -1.87
UPF2Q9HAU5 MIR3118-1-201ENST00000581787 76 ntBASIC3.36□□□□□ -1.87
UPF2Q9HAU5 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.36□□□□□ -1.87
UPF2Q9HAU5 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.36□□□□□ -1.87
UPF2Q9HAU5 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.36□□□□□ -1.87
UPF2Q9HAU5 AC084757.4-201ENST00000616350 526 ntBASIC3.36□□□□□ -1.87
UPF2Q9HAU5 MIR3651-201ENST00000630427 90 ntBASIC3.36□□□□□ -1.87
UPF2Q9HAU5 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
UPF2Q9HAU5 AC002546.1-201ENST00000588041 2504 ntBASIC3.36□□□□□ -1.87
UPF2Q9HAU5 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.36□□□□□ -1.87
UPF2Q9HAU5 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
UPF2Q9HAU5 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.36□□□□□ -1.87
UPF2Q9HAU5 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
UPF2Q9HAU5 FAM35BP-202ENST00000497389 3337 ntBASIC3.35□□□□□ -1.87
UPF2Q9HAU5 RNU6-359P-201ENST00000365466 108 ntBASIC3.35□□□□□ -1.87
UPF2Q9HAU5 RNU2-47P-201ENST00000410649 186 ntBASIC3.35□□□□□ -1.87
UPF2Q9HAU5 AL359704.1-201ENST00000411586 781 ntBASIC3.35□□□□□ -1.87
UPF2Q9HAU5 USP9YP36-201ENST00000424581 829 ntBASIC3.35□□□□□ -1.87
UPF2Q9HAU5 AL353777.1-201ENST00000425552 326 ntBASIC3.35□□□□□ -1.87
UPF2Q9HAU5 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.35□□□□□ -1.87
UPF2Q9HAU5 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.35□□□□□ -1.87
UPF2Q9HAU5 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.35□□□□□ -1.87
UPF2Q9HAU5 AC079448.1-201ENST00000449377 373 ntBASIC3.35□□□□□ -1.87
UPF2Q9HAU5 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.35□□□□□ -1.87
UPF2Q9HAU5 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.35□□□□□ -1.87
UPF2Q9HAU5 SNORD121B-201ENST00000458838 81 ntBASIC3.35□□□□□ -1.87
UPF2Q9HAU5 RN7SL807P-201ENST00000470923 297 ntBASIC3.35□□□□□ -1.87
UPF2Q9HAU5 AC090525.1-201ENST00000479116 478 ntBASIC3.35□□□□□ -1.87
UPF2Q9HAU5 AC006445.1-201ENST00000491925 405 ntBASIC3.35□□□□□ -1.87
UPF2Q9HAU5 AC034222.1-201ENST00000494052 532 ntBASIC3.35□□□□□ -1.87
UPF2Q9HAU5 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.35□□□□□ -1.87
UPF2Q9HAU5 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.35□□□□□ -1.87
UPF2Q9HAU5 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.35□□□□□ -1.87
UPF2Q9HAU5 RN7SKP298-201ENST00000515950 94 ntBASIC3.35□□□□□ -1.87
UPF2Q9HAU5 SCARNA13-201ENST00000516672 275 ntBASIC3.35□□□□□ -1.87
UPF2Q9HAU5 RNU6-56P-201ENST00000516986 93 ntBASIC3.35□□□□□ -1.87
UPF2Q9HAU5 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.35□□□□□ -1.87
UPF2Q9HAU5 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.35□□□□□ -1.87
UPF2Q9HAU5 AC107934.1-201ENST00000522215 217 ntBASIC3.35□□□□□ -1.87
UPF2Q9HAU5 SETP7-201ENST00000552169 453 ntBASIC3.35□□□□□ -1.87
UPF2Q9HAU5 AC027807.1-201ENST00000559921 996 ntBASIC3.35□□□□□ -1.87
UPF2Q9HAU5 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.35□□□□□ -1.87
UPF2Q9HAU5 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.35□□□□□ -1.87
UPF2Q9HAU5 AC012669.1-201ENST00000603209 283 ntBASIC3.35□□□□□ -1.87
UPF2Q9HAU5 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.35□□□□□ -1.87
UPF2Q9HAU5 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.35□□□□□ -1.87
UPF2Q9HAU5 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.35□□□□□ -1.87
UPF2Q9HAU5 AC099654.12-201ENST00000639868 649 ntBASIC3.35□□□□□ -1.87
UPF2Q9HAU5 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
UPF2Q9HAU5 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
UPF2Q9HAU5 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
UPF2Q9HAU5 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
UPF2Q9HAU5 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
UPF2Q9HAU5 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
UPF2Q9HAU5 RNVU1-14-201ENST00000384770 164 ntBASIC3.34□□□□□ -1.87
UPF2Q9HAU5 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.34□□□□□ -1.87
UPF2Q9HAU5 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.34□□□□□ -1.87
UPF2Q9HAU5 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.34□□□□□ -1.87
UPF2Q9HAU5 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.34□□□□□ -1.87
UPF2Q9HAU5 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.34□□□□□ -1.87
UPF2Q9HAU5 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.34□□□□□ -1.87
UPF2Q9HAU5 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.34□□□□□ -1.87
UPF2Q9HAU5 AC021382.1-201ENST00000483523 359 ntBASIC3.34□□□□□ -1.87
UPF2Q9HAU5 AC055855.1-201ENST00000489563 579 ntBASIC3.34□□□□□ -1.87
UPF2Q9HAU5 AL358832.1-201ENST00000497800 389 ntBASIC3.34□□□□□ -1.87
UPF2Q9HAU5 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.34□□□□□ -1.87
UPF2Q9HAU5 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.34□□□□□ -1.87
UPF2Q9HAU5 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.34□□□□□ -1.87
UPF2Q9HAU5 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.34□□□□□ -1.87
UPF2Q9HAU5 AC074250.1-201ENST00000511117 192 ntBASIC3.34□□□□□ -1.87
UPF2Q9HAU5 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.34□□□□□ -1.87
UPF2Q9HAU5 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
UPF2Q9HAU5 AP002404.1-201ENST00000532005 451 ntBASIC3.34□□□□□ -1.87
UPF2Q9HAU5 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.34□□□□□ -1.87
UPF2Q9HAU5 TPRKBP2-201ENST00000565969 475 ntBASIC3.34□□□□□ -1.87
UPF2Q9HAU5 AC090615.1-201ENST00000577519 154 ntBASIC3.34□□□□□ -1.87
UPF2Q9HAU5 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.34□□□□□ -1.87
UPF2Q9HAU5 MIR3944-201ENST00000581277 108 ntBASIC3.34□□□□□ -1.87
UPF2Q9HAU5 AC055876.5-201ENST00000605667 259 ntBASIC3.34□□□□□ -1.87
UPF2Q9HAU5 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
UPF2Q9HAU5 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.34□□□□□ -1.87
UPF2Q9HAU5 AC136475.10-201ENST00000620253 385 ntBASIC3.34□□□□□ -1.87
UPF2Q9HAU5 AC091953.2-201ENST00000623979 160 ntBASIC3.34□□□□□ -1.87
UPF2Q9HAU5 AC068137.3-201ENST00000639191 341 ntBASIC3.34□□□□□ -1.87
UPF2Q9HAU5 AC073869.6-201ENST00000640656 341 ntBASIC3.34□□□□□ -1.87
UPF2Q9HAU5 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.34□□□□□ -1.88
UPF2Q9HAU5 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.34□□□□□ -1.88
UPF2Q9HAU5 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
UPF2Q9HAU5 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms