Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 RNU6-920P-201ENST00000410926 92 ntBASIC2.82□□□□□ -1.96
RNF41Q9H4P4 AC078974.1-201ENST00000411597 223 ntBASIC2.82□□□□□ -1.96
RNF41Q9H4P4 TPMTP3-201ENST00000411928 735 ntBASIC2.82□□□□□ -1.96
RNF41Q9H4P4 RPL21P32-201ENST00000419877 477 ntBASIC2.82□□□□□ -1.96
RNF41Q9H4P4 UBE2V1P13-201ENST00000436983 439 ntBASIC2.82□□□□□ -1.96
RNF41Q9H4P4 EPS15P1-201ENST00000448836 336 ntBASIC2.82□□□□□ -1.96
RNF41Q9H4P4 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.82□□□□□ -1.96
RNF41Q9H4P4 HSPE1P6-201ENST00000479457 291 ntBASIC2.82□□□□□ -1.96
RNF41Q9H4P4 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.82□□□□□ -1.96
RNF41Q9H4P4 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.82□□□□□ -1.96
RNF41Q9H4P4 AC098799.2-201ENST00000509466 868 ntBASIC2.82□□□□□ -1.96
RNF41Q9H4P4 AC022690.1-201ENST00000526681 550 ntBASIC2.82□□□□□ -1.96
RNF41Q9H4P4 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.82□□□□□ -1.96
RNF41Q9H4P4 MRPS36P5-201ENST00000551909 298 ntBASIC2.82□□□□□ -1.96
RNF41Q9H4P4 AC060771.1-201ENST00000582031 164 ntBASIC2.82□□□□□ -1.96
RNF41Q9H4P4 MIR3670-2-201ENST00000582974 65 ntBASIC2.82□□□□□ -1.96
RNF41Q9H4P4 MIR3670-1-201ENST00000584160 65 ntBASIC2.82□□□□□ -1.96
RNF41Q9H4P4 MIR3670-3-201ENST00000584855 65 ntBASIC2.82□□□□□ -1.96
RNF41Q9H4P4 MIR3670-4-201ENST00000612260 65 ntBASIC2.82□□□□□ -1.96
RNF41Q9H4P4 AL603758.1-201ENST00000618654 241 ntBASIC2.82□□□□□ -1.96
RNF41Q9H4P4 AL603755.1-201ENST00000619504 163 ntBASIC2.82□□□□□ -1.96
RNF41Q9H4P4 AL356266.1-201ENST00000623311 483 ntBASIC2.82□□□□□ -1.96
RNF41Q9H4P4 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.82□□□□□ -1.96
RNF41Q9H4P4 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
RNF41Q9H4P4 AL138713.1-201ENST00000624026 2130 ntBASIC2.81□□□□□ -1.96
RNF41Q9H4P4 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.81□□□□□ -1.96
RNF41Q9H4P4 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
RNF41Q9H4P4 DEFB108F-201ENST00000344638 222 ntBASIC2.81□□□□□ -1.96
RNF41Q9H4P4 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
RNF41Q9H4P4 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.81□□□□□ -1.96
RNF41Q9H4P4 FAT1P1-201ENST00000406588 507 ntBASIC2.81□□□□□ -1.96
RNF41Q9H4P4 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.81□□□□□ -1.96
RNF41Q9H4P4 MTATP6P17-201ENST00000431030 672 ntBASIC2.81□□□□□ -1.96
RNF41Q9H4P4 AL365184.2-201ENST00000431139 435 ntBASIC2.81□□□□□ -1.96
RNF41Q9H4P4 CETN4P-201ENST00000432407 469 ntBASIC2.81□□□□□ -1.96
RNF41Q9H4P4 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.81□□□□□ -1.96
RNF41Q9H4P4 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.81□□□□□ -1.96
RNF41Q9H4P4 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.81□□□□□ -1.96
RNF41Q9H4P4 AC234775.1-201ENST00000454247 670 ntBASIC2.81□□□□□ -1.96
RNF41Q9H4P4 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.81□□□□□ -1.96
RNF41Q9H4P4 AC055855.1-201ENST00000489563 579 ntBASIC2.81□□□□□ -1.96
RNF41Q9H4P4 AC135721.1-201ENST00000497954 479 ntBASIC2.81□□□□□ -1.96
RNF41Q9H4P4 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
RNF41Q9H4P4 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.81□□□□□ -1.96
RNF41Q9H4P4 AP003122.3-201ENST00000526316 255 ntBASIC2.81□□□□□ -1.96
RNF41Q9H4P4 DEFB108D-201ENST00000527787 222 ntBASIC2.81□□□□□ -1.96
RNF41Q9H4P4 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.81□□□□□ -1.96
RNF41Q9H4P4 MIR3915-201ENST00000578518 97 ntBASIC2.81□□□□□ -1.96
RNF41Q9H4P4 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.81□□□□□ -1.96
RNF41Q9H4P4 AC004067.1-201ENST00000608733 700 ntBASIC2.81□□□□□ -1.96
RNF41Q9H4P4 AL355472.4-201ENST00000610233 626 ntBASIC2.81□□□□□ -1.96
RNF41Q9H4P4 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.81□□□□□ -1.96
RNF41Q9H4P4 AC022079.1-201ENST00000621546 602 ntBASIC2.81□□□□□ -1.96
RNF41Q9H4P4 AC009268.2-201ENST00000621925 457 ntBASIC2.81□□□□□ -1.96
RNF41Q9H4P4 AC091965.5-201ENST00000624785 342 ntBASIC2.81□□□□□ -1.96
RNF41Q9H4P4 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
RNF41Q9H4P4 MTCO1P9-201ENST00000505577 1534 ntBASIC2.81□□□□□ -1.96
RNF41Q9H4P4 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
RNF41Q9H4P4 AC012321.1-201ENST00000561622 1588 ntBASIC2.8□□□□□ -1.96
RNF41Q9H4P4 Y_RNA.560-201ENST00000384689 102 ntBASIC2.8□□□□□ -1.96
RNF41Q9H4P4 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.8□□□□□ -1.96
RNF41Q9H4P4 CCNG1P1-201ENST00000406783 885 ntBASIC2.8□□□□□ -1.96
RNF41Q9H4P4 RN7SKP140-201ENST00000411196 284 ntBASIC2.8□□□□□ -1.96
RNF41Q9H4P4 HMGN2P35-201ENST00000412164 270 ntBASIC2.8□□□□□ -1.96
RNF41Q9H4P4 Z99497.1-201ENST00000421282 135 ntBASIC2.8□□□□□ -1.96
RNF41Q9H4P4 RPS27AP14-201ENST00000422868 454 ntBASIC2.8□□□□□ -1.96
RNF41Q9H4P4 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.8□□□□□ -1.96
RNF41Q9H4P4 RPL37P21-201ENST00000435890 276 ntBASIC2.8□□□□□ -1.96
RNF41Q9H4P4 AL121871.1-201ENST00000443413 436 ntBASIC2.8□□□□□ -1.96
RNF41Q9H4P4 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.8□□□□□ -1.96
RNF41Q9H4P4 TPT1P14-201ENST00000448018 505 ntBASIC2.8□□□□□ -1.96
RNF41Q9H4P4 ZNF114P1-201ENST00000453500 292 ntBASIC2.8□□□□□ -1.96
RNF41Q9H4P4 AP1S2P1-201ENST00000457344 379 ntBASIC2.8□□□□□ -1.96
RNF41Q9H4P4 MTCO1P42-201ENST00000457379 726 ntBASIC2.8□□□□□ -1.96
RNF41Q9H4P4 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.8□□□□□ -1.96
RNF41Q9H4P4 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.8□□□□□ -1.96
RNF41Q9H4P4 RNU6-1003P-201ENST00000517099 105 ntBASIC2.8□□□□□ -1.96
RNF41Q9H4P4 AC004486.1-201ENST00000546846 233 ntBASIC2.8□□□□□ -1.96
RNF41Q9H4P4 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.8□□□□□ -1.96
RNF41Q9H4P4 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.8□□□□□ -1.96
RNF41Q9H4P4 ROCK1P1-201ENST00000573767 549 ntBASIC2.8□□□□□ -1.96
RNF41Q9H4P4 MIR4513-201ENST00000581077 86 ntBASIC2.8□□□□□ -1.96
RNF41Q9H4P4 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.8□□□□□ -1.96
RNF41Q9H4P4 AL356575.1-201ENST00000603008 283 ntBASIC2.8□□□□□ -1.96
RNF41Q9H4P4 AC091965.4-201ENST00000607691 587 ntBASIC2.8□□□□□ -1.96
RNF41Q9H4P4 AC090132.2-201ENST00000615881 347 ntBASIC2.8□□□□□ -1.96
RNF41Q9H4P4 AC104010.1-201ENST00000616889 150 ntBASIC2.8□□□□□ -1.96
RNF41Q9H4P4 AC008443.7-201ENST00000622195 246 ntBASIC2.8□□□□□ -1.96
RNF41Q9H4P4 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.8□□□□□ -1.96
RNF41Q9H4P4 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.8□□□□□ -1.96
RNF41Q9H4P4 MAPK10-322ENST00000641485 4530 ntBASIC2.8□□□□□ -1.96
RNF41Q9H4P4 CUL1P1-201ENST00000509510 2425 ntBASIC2.8□□□□□ -1.96
RNF41Q9H4P4 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.8□□□□□ -1.96
RNF41Q9H4P4 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
RNF41Q9H4P4 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
RNF41Q9H4P4 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.8□□□□□ -1.96
RNF41Q9H4P4 AC092125.1-201ENST00000562568 1995 ntBASIC2.8□□□□□ -1.96
RNF41Q9H4P4 AL445523.1-201ENST00000451184 1362 ntBASIC2.79□□□□□ -1.96
RNF41Q9H4P4 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RNF41Q9H4P4 MIR6073-201ENST00000352083 89 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms