Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS11Q9H270 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.25□□□□□ -1.73
VPS11Q9H270 AC005019.1-201ENST00000436455 431 ntBASIC4.25□□□□□ -1.73
VPS11Q9H270 AL772161.1-201ENST00000439130 476 ntBASIC4.25□□□□□ -1.73
VPS11Q9H270 RAC1P7-201ENST00000445367 377 ntBASIC4.25□□□□□ -1.73
VPS11Q9H270 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS11Q9H270 AL359073.1-201ENST00000448036 403 ntBASIC4.25□□□□□ -1.73
VPS11Q9H270 RPS29P15-201ENST00000458329 171 ntBASIC4.25□□□□□ -1.73
VPS11Q9H270 RPL35AP28-201ENST00000459730 331 ntBASIC4.25□□□□□ -1.73
VPS11Q9H270 AC055855.1-201ENST00000489563 579 ntBASIC4.25□□□□□ -1.73
VPS11Q9H270 RPL23AP55-201ENST00000498163 452 ntBASIC4.25□□□□□ -1.73
VPS11Q9H270 RNU2-58P-201ENST00000516403 183 ntBASIC4.25□□□□□ -1.73
VPS11Q9H270 RNA5SP454-201ENST00000517231 127 ntBASIC4.25□□□□□ -1.73
VPS11Q9H270 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS11Q9H270 AP000907.2-201ENST00000530827 353 ntBASIC4.25□□□□□ -1.73
VPS11Q9H270 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS11Q9H270 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS11Q9H270 AC068790.3-201ENST00000602988 553 ntBASIC4.25□□□□□ -1.73
VPS11Q9H270 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.25□□□□□ -1.73
VPS11Q9H270 HMGB1P50-201ENST00000605814 607 ntBASIC4.25□□□□□ -1.73
VPS11Q9H270 U2.1-201ENST00000618978 145 ntBASIC4.25□□□□□ -1.73
VPS11Q9H270 AC091953.3-201ENST00000623220 236 ntBASIC4.25□□□□□ -1.73
VPS11Q9H270 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VPS11Q9H270 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VPS11Q9H270 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.25□□□□□ -1.73
VPS11Q9H270 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VPS11Q9H270 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS11Q9H270 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS11Q9H270 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS11Q9H270 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VPS11Q9H270 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS11Q9H270 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.24□□□□□ -1.73
VPS11Q9H270 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS11Q9H270 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS11Q9H270 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS11Q9H270 Z82217.1-201ENST00000625157 8149 ntBASIC4.24□□□□□ -1.73
VPS11Q9H270 RNU6-173P-201ENST00000364215 104 ntBASIC4.24□□□□□ -1.73
VPS11Q9H270 Y_RNA.252-201ENST00000364556 101 ntBASIC4.24□□□□□ -1.73
VPS11Q9H270 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
VPS11Q9H270 Y_RNA.396-201ENST00000383949 103 ntBASIC4.24□□□□□ -1.73
VPS11Q9H270 Y_RNA.447-201ENST00000384184 113 ntBASIC4.24□□□□□ -1.73
VPS11Q9H270 Y_RNA.556-201ENST00000384677 113 ntBASIC4.24□□□□□ -1.73
VPS11Q9H270 SNORA19-201ENST00000384737 128 ntBASIC4.24□□□□□ -1.73
VPS11Q9H270 RNU6-754P-201ENST00000391166 107 ntBASIC4.24□□□□□ -1.73
VPS11Q9H270 AL133270.1-201ENST00000402635 279 ntBASIC4.24□□□□□ -1.73
VPS11Q9H270 MIR1183-201ENST00000408856 89 ntBASIC4.24□□□□□ -1.73
VPS11Q9H270 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS11Q9H270 RNU4-6P-201ENST00000410804 122 ntBASIC4.24□□□□□ -1.73
VPS11Q9H270 RNU6-516P-201ENST00000411381 104 ntBASIC4.24□□□□□ -1.73
VPS11Q9H270 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.24□□□□□ -1.73
VPS11Q9H270 AL359265.2-201ENST00000434367 631 ntBASIC4.24□□□□□ -1.73
VPS11Q9H270 RPL35AP22-201ENST00000436855 335 ntBASIC4.24□□□□□ -1.73
VPS11Q9H270 AC004866.2-201ENST00000438285 481 ntBASIC4.24□□□□□ -1.73
VPS11Q9H270 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.24□□□□□ -1.73
VPS11Q9H270 AL118520.1-201ENST00000450770 291 ntBASIC4.24□□□□□ -1.73
VPS11Q9H270 PCNPP5-201ENST00000452246 481 ntBASIC4.24□□□□□ -1.73
VPS11Q9H270 GSTA11P-201ENST00000452866 669 ntBASIC4.24□□□□□ -1.73
VPS11Q9H270 AC231760.1-201ENST00000498002 260 ntBASIC4.24□□□□□ -1.73
VPS11Q9H270 AC097473.1-201ENST00000508142 408 ntBASIC4.24□□□□□ -1.73
VPS11Q9H270 AC002456.2-201ENST00000509356 380 ntBASIC4.24□□□□□ -1.73
VPS11Q9H270 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
VPS11Q9H270 AP000889.1-201ENST00000530968 660 ntBASIC4.24□□□□□ -1.73
VPS11Q9H270 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
VPS11Q9H270 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.24□□□□□ -1.73
VPS11Q9H270 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.24□□□□□ -1.73
VPS11Q9H270 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.24□□□□□ -1.73
VPS11Q9H270 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.24□□□□□ -1.73
VPS11Q9H270 AC084783.1-201ENST00000565846 910 ntBASIC4.24□□□□□ -1.73
VPS11Q9H270 FAM60BP-201ENST00000578364 658 ntBASIC4.24□□□□□ -1.73
VPS11Q9H270 MIR3146-201ENST00000580367 79 ntBASIC4.24□□□□□ -1.73
VPS11Q9H270 MIR5583-1-201ENST00000580941 59 ntBASIC4.24□□□□□ -1.73
VPS11Q9H270 MIR3672-201ENST00000584290 82 ntBASIC4.24□□□□□ -1.73
VPS11Q9H270 AC105224.1-201ENST00000587055 421 ntBASIC4.24□□□□□ -1.73
VPS11Q9H270 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.24□□□□□ -1.73
VPS11Q9H270 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS11Q9H270 AC130324.3-201ENST00000614165 542 ntBASIC4.24□□□□□ -1.73
VPS11Q9H270 AL732372.2-225ENST00000642124 456 ntBASIC4.24□□□□□ -1.73
VPS11Q9H270 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS11Q9H270 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VPS11Q9H270 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
VPS11Q9H270 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.24□□□□□ -1.73
VPS11Q9H270 RAD17P1-201ENST00000418130 2042 ntBASIC4.24□□□□□ -1.73
VPS11Q9H270 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
VPS11Q9H270 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
VPS11Q9H270 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.23□□□□□ -1.73
VPS11Q9H270 AC106871.1-201ENST00000568324 3102 ntBASIC4.23□□□□□ -1.73
VPS11Q9H270 RNU6-890P-201ENST00000384121 107 ntBASIC4.23□□□□□ -1.73
VPS11Q9H270 MIR454-201ENST00000390180 115 ntBASIC4.23□□□□□ -1.73
VPS11Q9H270 AL606923.1-201ENST00000406616 190 ntBASIC4.23□□□□□ -1.73
VPS11Q9H270 HMGN1P24-201ENST00000412282 298 ntBASIC4.23□□□□□ -1.73
VPS11Q9H270 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.23□□□□□ -1.73
VPS11Q9H270 DPH3P2-201ENST00000422618 250 ntBASIC4.23□□□□□ -1.73
VPS11Q9H270 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.23□□□□□ -1.73
VPS11Q9H270 VDAC1P3-201ENST00000434069 851 ntBASIC4.23□□□□□ -1.73
VPS11Q9H270 AF228730.2-201ENST00000438784 848 ntBASIC4.23□□□□□ -1.73
VPS11Q9H270 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.23□□□□□ -1.73
VPS11Q9H270 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS11Q9H270 MTND1P17-201ENST00000448961 204 ntBASIC4.23□□□□□ -1.73
VPS11Q9H270 NANOGP10-201ENST00000453325 895 ntBASIC4.23□□□□□ -1.73
VPS11Q9H270 RPL23AP11-201ENST00000475260 469 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 171.5 ms