Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 HSPA8P1-201ENST00000425843 1833 ntBASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 AC009812.4-201ENST00000569134 1805 ntBASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 MIR423-201ENST00000362201 94 ntBASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 Y_RNA.387-201ENST00000383918 102 ntBASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 RNU6-1127P-201ENST00000384580 107 ntBASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 MIR200C-201ENST00000384980 68 ntBASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 MTATP6P4-201ENST00000427725 675 ntBASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 AC236972.2-201ENST00000434979 310 ntBASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 RPL26P6-201ENST00000440913 438 ntBASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 AL500522.2-201ENST00000448562 343 ntBASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 TRBV1-201ENST00000476502 284 ntBASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 RPL21P93-201ENST00000480465 489 ntBASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 RN7SL271P-201ENST00000487601 295 ntBASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 RPL29P14-201ENST00000495837 428 ntBASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 KLHL2P1-201ENST00000508691 521 ntBASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 SNORA67.7-201ENST00000516664 135 ntBASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 AC090136.1-201ENST00000520009 240 ntBASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 AP001804.3-201ENST00000525146 880 ntBASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 AC106782.4-201ENST00000568264 210 ntBASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 MIR4286-201ENST00000580651 93 ntBASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 AC067852.3-201ENST00000589177 561 ntBASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 BNIP3P25-201ENST00000596023 559 ntBASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 AC007619.2-201ENST00000605743 379 ntBASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 AL359547.2-201ENST00000615810 418 ntBASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 AC004925.1-201ENST00000624256 2706 ntBASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
AMBRA1Q9C0C7 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 SNORD113-7-201ENST00000363762 77 ntBASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 SNORD46.1-201ENST00000364139 104 ntBASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 RNU6-1227P-201ENST00000383981 107 ntBASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 RNU1-13P-201ENST00000384499 162 ntBASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 PTMAP2-201ENST00000397627 327 ntBASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 PPIAP31-201ENST00000405422 495 ntBASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 COX6B1P7-201ENST00000430845 235 ntBASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 AC005534.2-201ENST00000431047 433 ntBASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 NDUFA5P4-201ENST00000436704 385 ntBASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 HMGB3P11-201ENST00000440127 604 ntBASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 RPS15AP27-201ENST00000449183 343 ntBASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 RNU6-953P-201ENST00000459154 107 ntBASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 Y_RNA.632-201ENST00000459189 102 ntBASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 RNU7-66P-201ENST00000459469 62 ntBASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 AC106872.2-201ENST00000494303 480 ntBASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 AP001086.1-201ENST00000494882 321 ntBASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 MTCO1P29-201ENST00000496868 288 ntBASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 AC099522.1-202ENST00000514718 367 ntBASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 RNU6-677P-201ENST00000516914 101 ntBASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 ERHP1-201ENST00000523006 310 ntBASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 CYCSP29-201ENST00000533731 318 ntBASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 AP000763.2-201ENST00000540641 163 ntBASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 MIR5684-201ENST00000585074 65 ntBASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 AC024220.1-201ENST00000603675 484 ntBASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 AC092747.3-201ENST00000603769 301 ntBASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 AC009570.1-201ENST00000609599 745 ntBASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 MIR492-201ENST00000638676 116 ntBASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
AMBRA1Q9C0C7 PRO1804-201ENST00000623780 2050 ntBASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
AMBRA1Q9C0C7 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms