Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.4□□□□□ -1.87
SDF4Q9BRK5 AC128657.1-201ENST00000549459 145 ntBASIC3.4□□□□□ -1.87
SDF4Q9BRK5 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.4□□□□□ -1.87
SDF4Q9BRK5 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.4□□□□□ -1.87
SDF4Q9BRK5 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.4□□□□□ -1.87
SDF4Q9BRK5 AC008669.1-201ENST00000565823 2178 ntBASIC3.4□□□□□ -1.87
SDF4Q9BRK5 AF131215.7-201ENST00000602443 707 ntBASIC3.4□□□□□ -1.87
SDF4Q9BRK5 AC012065.4-201ENST00000602445 679 ntBASIC3.4□□□□□ -1.87
SDF4Q9BRK5 DPPA3P3-201ENST00000603842 430 ntBASIC3.4□□□□□ -1.87
SDF4Q9BRK5 AC112191.3-201ENST00000604371 277 ntBASIC3.4□□□□□ -1.87
SDF4Q9BRK5 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.4□□□□□ -1.87
SDF4Q9BRK5 AC103710.2-201ENST00000609912 942 ntBASIC3.4□□□□□ -1.87
SDF4Q9BRK5 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SDF4Q9BRK5 AC004852.3-201ENST00000614131 326 ntBASIC3.4□□□□□ -1.87
SDF4Q9BRK5 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.4□□□□□ -1.87
SDF4Q9BRK5 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.4□□□□□ -1.87
SDF4Q9BRK5 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
SDF4Q9BRK5 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.4□□□□□ -1.87
SDF4Q9BRK5 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SDF4Q9BRK5 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.39□□□□□ -1.87
SDF4Q9BRK5 RNU6-1167P-201ENST00000363227 94 ntBASIC3.39□□□□□ -1.87
SDF4Q9BRK5 RNY4P16-201ENST00000364768 94 ntBASIC3.39□□□□□ -1.87
SDF4Q9BRK5 NDUFS5P1-201ENST00000405668 289 ntBASIC3.39□□□□□ -1.87
SDF4Q9BRK5 RPL5P18-201ENST00000406671 891 ntBASIC3.39□□□□□ -1.87
SDF4Q9BRK5 FCF1P10-201ENST00000407590 479 ntBASIC3.39□□□□□ -1.87
SDF4Q9BRK5 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.39□□□□□ -1.87
SDF4Q9BRK5 COTL1P1-201ENST00000422309 375 ntBASIC3.39□□□□□ -1.87
SDF4Q9BRK5 ELOCP14-201ENST00000428070 331 ntBASIC3.39□□□□□ -1.87
SDF4Q9BRK5 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.39□□□□□ -1.87
SDF4Q9BRK5 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.39□□□□□ -1.87
SDF4Q9BRK5 ELOCP7-201ENST00000439968 331 ntBASIC3.39□□□□□ -1.87
SDF4Q9BRK5 DDX3P2-201ENST00000446138 111 ntBASIC3.39□□□□□ -1.87
SDF4Q9BRK5 COX6CP12-201ENST00000446748 202 ntBASIC3.39□□□□□ -1.87
SDF4Q9BRK5 SSXP1-201ENST00000453640 473 ntBASIC3.39□□□□□ -1.87
SDF4Q9BRK5 SNRPFP4-201ENST00000456366 242 ntBASIC3.39□□□□□ -1.87
SDF4Q9BRK5 AC117440.1-201ENST00000474107 571 ntBASIC3.39□□□□□ -1.87
SDF4Q9BRK5 RNA5SP290-201ENST00000517133 127 ntBASIC3.39□□□□□ -1.87
SDF4Q9BRK5 AP006587.4-201ENST00000526053 529 ntBASIC3.39□□□□□ -1.87
SDF4Q9BRK5 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.39□□□□□ -1.87
SDF4Q9BRK5 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.39□□□□□ -1.87
SDF4Q9BRK5 LARP7P3-201ENST00000579888 337 ntBASIC3.39□□□□□ -1.87
SDF4Q9BRK5 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.39□□□□□ -1.87
SDF4Q9BRK5 AL670379.6-201ENST00000603753 252 ntBASIC3.39□□□□□ -1.87
SDF4Q9BRK5 AL670379.11-201ENST00000604059 253 ntBASIC3.39□□□□□ -1.87
SDF4Q9BRK5 AC008162.1-201ENST00000604718 254 ntBASIC3.39□□□□□ -1.87
SDF4Q9BRK5 AL670379.1-201ENST00000604752 252 ntBASIC3.39□□□□□ -1.87
SDF4Q9BRK5 AL670379.5-201ENST00000605253 252 ntBASIC3.39□□□□□ -1.87
SDF4Q9BRK5 AL670379.12-201ENST00000605291 253 ntBASIC3.39□□□□□ -1.87
SDF4Q9BRK5 AL670379.8-201ENST00000605353 252 ntBASIC3.39□□□□□ -1.87
SDF4Q9BRK5 AL670379.7-201ENST00000605823 252 ntBASIC3.39□□□□□ -1.87
SDF4Q9BRK5 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.39□□□□□ -1.87
SDF4Q9BRK5 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.39□□□□□ -1.87
SDF4Q9BRK5 Z99129.2-201ENST00000619967 314 ntBASIC3.39□□□□□ -1.87
SDF4Q9BRK5 FRG1KP-201ENST00000623592 341 ntBASIC3.39□□□□□ -1.87
SDF4Q9BRK5 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.39□□□□□ -1.87
SDF4Q9BRK5 AC092435.3-201ENST00000565538 3654 ntBASIC3.39□□□□□ -1.87
SDF4Q9BRK5 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.39□□□□□ -1.87
SDF4Q9BRK5 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SDF4Q9BRK5 AC009487.2-201ENST00000420969 6821 ntBASIC3.39□□□□□ -1.87
SDF4Q9BRK5 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
SDF4Q9BRK5 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.38□□□□□ -1.87
SDF4Q9BRK5 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.38□□□□□ -1.87
SDF4Q9BRK5 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
SDF4Q9BRK5 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.38□□□□□ -1.87
SDF4Q9BRK5 AC073325.2-201ENST00000339545 159 ntBASIC3.38□□□□□ -1.87
SDF4Q9BRK5 Y_RNA.245-201ENST00000364493 95 ntBASIC3.38□□□□□ -1.87
SDF4Q9BRK5 AF228730.1-201ENST00000397972 663 ntBASIC3.38□□□□□ -1.87
SDF4Q9BRK5 MIR888-201ENST00000401186 77 ntBASIC3.38□□□□□ -1.87
SDF4Q9BRK5 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.38□□□□□ -1.87
SDF4Q9BRK5 AL645937.1-202ENST00000421799 937 ntBASIC3.38□□□□□ -1.87
SDF4Q9BRK5 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SDF4Q9BRK5 MTND4LP3-201ENST00000468320 276 ntBASIC3.38□□□□□ -1.87
SDF4Q9BRK5 RPL7P5-201ENST00000471472 736 ntBASIC3.38□□□□□ -1.87
SDF4Q9BRK5 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.38□□□□□ -1.87
SDF4Q9BRK5 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.38□□□□□ -1.87
SDF4Q9BRK5 AL391261.3-201ENST00000557194 520 ntBASIC3.38□□□□□ -1.87
SDF4Q9BRK5 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.38□□□□□ -1.87
SDF4Q9BRK5 AL157394.1-201ENST00000562983 1224 ntBASIC3.38□□□□□ -1.87
SDF4Q9BRK5 AC109446.2-201ENST00000567872 497 ntBASIC3.38□□□□□ -1.87
SDF4Q9BRK5 U73023.1-201ENST00000603134 700 ntBASIC3.38□□□□□ -1.87
SDF4Q9BRK5 AP000860.1-201ENST00000605250 559 ntBASIC3.38□□□□□ -1.87
SDF4Q9BRK5 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SDF4Q9BRK5 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.38□□□□□ -1.87
SDF4Q9BRK5 AC006386.2-201ENST00000624491 75 ntBASIC3.38□□□□□ -1.87
SDF4Q9BRK5 AC012005.1-201ENST00000624575 75 ntBASIC3.38□□□□□ -1.87
SDF4Q9BRK5 AL137790.1-201ENST00000634283 177 ntBASIC3.38□□□□□ -1.87
SDF4Q9BRK5 API5P2-201ENST00000397055 1498 ntBASIC3.38□□□□□ -1.87
SDF4Q9BRK5 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
SDF4Q9BRK5 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.38□□□□□ -1.87
SDF4Q9BRK5 MTND5P29-201ENST00000458676 1807 ntBASIC3.37□□□□□ -1.87
SDF4Q9BRK5 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
SDF4Q9BRK5 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
SDF4Q9BRK5 AL359693.1-201ENST00000614959 2407 ntBASIC3.37□□□□□ -1.87
SDF4Q9BRK5 RNU4-21P-201ENST00000362802 126 ntBASIC3.37□□□□□ -1.87
SDF4Q9BRK5 MIR634-201ENST00000385208 97 ntBASIC3.37□□□□□ -1.87
SDF4Q9BRK5 U3.26-201ENST00000391236 204 ntBASIC3.37□□□□□ -1.87
SDF4Q9BRK5 Y_RNA.598-201ENST00000410480 95 ntBASIC3.37□□□□□ -1.87
SDF4Q9BRK5 EEF1A1P41-201ENST00000414667 207 ntBASIC3.37□□□□□ -1.87
SDF4Q9BRK5 RAC1P6-201ENST00000423911 575 ntBASIC3.37□□□□□ -1.87
SDF4Q9BRK5 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms