Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 RNU6-1251P-201ENST00000364502 107 ntBASIC1.52□□□□□ -2.17
ABCA3Q99758 EBAG9P1-201ENST00000418955 543 ntBASIC1.52□□□□□ -2.17
ABCA3Q99758 AIMP1P2-201ENST00000425294 312 ntBASIC1.52□□□□□ -2.17
ABCA3Q99758 SDCBPP1-201ENST00000440192 890 ntBASIC1.52□□□□□ -2.17
ABCA3Q99758 RPL30P12-201ENST00000474666 353 ntBASIC1.52□□□□□ -2.17
ABCA3Q99758 EIF4EP5-201ENST00000528228 640 ntBASIC1.52□□□□□ -2.17
ABCA3Q99758 SNRPGP16-201ENST00000533275 226 ntBASIC1.52□□□□□ -2.17
ABCA3Q99758 AC233266.2-201ENST00000567067 528 ntBASIC1.52□□□□□ -2.17
ABCA3Q99758 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.52□□□□□ -2.17
ABCA3Q99758 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.52□□□□□ -2.17
ABCA3Q99758 AL049737.1-201ENST00000413920 1403 ntBASIC1.51□□□□□ -2.17
ABCA3Q99758 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
ABCA3Q99758 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
ABCA3Q99758 RNU1-105P-201ENST00000363470 161 ntBASIC1.51□□□□□ -2.17
ABCA3Q99758 SNORA68.1-201ENST00000364537 132 ntBASIC1.51□□□□□ -2.17
ABCA3Q99758 MIR216A-201ENST00000385063 110 ntBASIC1.51□□□□□ -2.17
ABCA3Q99758 SFR1P1-201ENST00000403720 688 ntBASIC1.51□□□□□ -2.17
ABCA3Q99758 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.51□□□□□ -2.17
ABCA3Q99758 SNRPGP6-201ENST00000451124 220 ntBASIC1.51□□□□□ -2.17
ABCA3Q99758 AC023790.1-201ENST00000482174 347 ntBASIC1.51□□□□□ -2.17
ABCA3Q99758 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.51□□□□□ -2.17
ABCA3Q99758 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.51□□□□□ -2.17
ABCA3Q99758 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
ABCA3Q99758 AC092474.3-201ENST00000603022 568 ntBASIC1.51□□□□□ -2.17
ABCA3Q99758 AL020996.3-201ENST00000606617 222 ntBASIC1.51□□□□□ -2.17
ABCA3Q99758 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC1.51□□□□□ -2.17
ABCA3Q99758 RMST_5.1-201ENST00000618704 126 ntBASIC1.51□□□□□ -2.17
ABCA3Q99758 AL138955.1-201ENST00000622881 1040 ntBASIC1.51□□□□□ -2.17
ABCA3Q99758 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.5□□□□□ -2.17
ABCA3Q99758 AL365496.1-201ENST00000426885 215 ntBASIC1.5□□□□□ -2.17
ABCA3Q99758 VN1R108P-201ENST00000431580 830 ntBASIC1.5□□□□□ -2.17
ABCA3Q99758 ATG12P2-201ENST00000456830 416 ntBASIC1.5□□□□□ -2.17
ABCA3Q99758 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.5□□□□□ -2.17
ABCA3Q99758 AC025918.2-201ENST00000558683 763 ntBASIC1.5□□□□□ -2.17
ABCA3Q99758 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC1.5□□□□□ -2.17
ABCA3Q99758 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.5□□□□□ -2.17
ABCA3Q99758 AC078899.2-201ENST00000595282 212 ntBASIC1.5□□□□□ -2.17
ABCA3Q99758 HSPE1P7-201ENST00000604681 321 ntBASIC1.5□□□□□ -2.17
ABCA3Q99758 AC004908.2-201ENST00000609090 574 ntBASIC1.5□□□□□ -2.17
ABCA3Q99758 AC020658.4-201ENST00000613987 684 ntBASIC1.5□□□□□ -2.17
ABCA3Q99758 AC130650.2-201ENST00000618736 2403 ntBASIC1.5□□□□□ -2.17
ABCA3Q99758 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
ABCA3Q99758 AC111188.2-201ENST00000529697 1387 ntBASIC1.49□□□□□ -2.17
ABCA3Q99758 SNORA3A-201ENST00000364113 130 ntBASIC1.49□□□□□ -2.17
ABCA3Q99758 SNORD65-201ENST00000391079 73 ntBASIC1.49□□□□□ -2.17
ABCA3Q99758 MIR1285-1-201ENST00000408593 84 ntBASIC1.49□□□□□ -2.17
ABCA3Q99758 AL356320.2-201ENST00000417263 507 ntBASIC1.49□□□□□ -2.17
ABCA3Q99758 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.49□□□□□ -2.17
ABCA3Q99758 PGBD4P6-201ENST00000421501 610 ntBASIC1.49□□□□□ -2.17
ABCA3Q99758 XKRYP1-201ENST00000423438 492 ntBASIC1.49□□□□□ -2.17
ABCA3Q99758 XKRYP2-201ENST00000432915 492 ntBASIC1.49□□□□□ -2.17
ABCA3Q99758 ARF4P4-201ENST00000439608 520 ntBASIC1.49□□□□□ -2.17
ABCA3Q99758 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.49□□□□□ -2.17
ABCA3Q99758 TRGVB-201ENST00000453257 471 ntBASIC1.49□□□□□ -2.17
ABCA3Q99758 AC010099.1-201ENST00000455434 375 ntBASIC1.49□□□□□ -2.17
ABCA3Q99758 PMCHL2-203ENST00000457791 237 ntBASIC1.49□□□□□ -2.17
ABCA3Q99758 AC114801.2-201ENST00000503825 781 ntBASIC1.49□□□□□ -2.17
ABCA3Q99758 MIR5571-201ENST00000577998 113 ntBASIC1.49□□□□□ -2.17
ABCA3Q99758 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.49□□□□□ -2.17
ABCA3Q99758 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.49□□□□□ -2.17
ABCA3Q99758 HMGB3P31-201ENST00000413333 595 ntBASIC1.49□□□□□ -2.17
ABCA3Q99758 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.49□□□□□ -2.17
ABCA3Q99758 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.49□□□□□ -2.17
ABCA3Q99758 AC097493.1-201ENST00000463958 372 ntBASIC1.49□□□□□ -2.17
ABCA3Q99758 MTCYBP35-201ENST00000503630 1137 ntBASIC1.49□□□□□ -2.17
ABCA3Q99758 Y_RNA.681-201ENST00000516445 113 ntBASIC1.49□□□□□ -2.17
ABCA3Q99758 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.49□□□□□ -2.17
ABCA3Q99758 MIR4287-201ENST00000579398 78 ntBASIC1.49□□□□□ -2.17
ABCA3Q99758 AL627230.6-201ENST00000611129 280 ntBASIC1.49□□□□□ -2.17
ABCA3Q99758 AC025594.3-201ENST00000613068 790 ntBASIC1.49□□□□□ -2.17
ABCA3Q99758 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
ABCA3Q99758 AC091932.3-201ENST00000624223 323 ntBASIC1.49□□□□□ -2.17
ABCA3Q99758 AL442644.1-201ENST00000454390 3105 ntBASIC1.48□□□□□ -2.17
ABCA3Q99758 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
ABCA3Q99758 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
ABCA3Q99758 RNU4-38P-201ENST00000364472 129 ntBASIC1.48□□□□□ -2.17
ABCA3Q99758 RNU6-920P-201ENST00000410926 92 ntBASIC1.48□□□□□ -2.17
ABCA3Q99758 SNORD56-201ENST00000413522 71 ntBASIC1.48□□□□□ -2.17
ABCA3Q99758 SNRPEP10-201ENST00000420249 274 ntBASIC1.48□□□□□ -2.17
ABCA3Q99758 RNU2-44P-201ENST00000516795 194 ntBASIC1.48□□□□□ -2.17
ABCA3Q99758 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.48□□□□□ -2.17
ABCA3Q99758 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.48□□□□□ -2.17
ABCA3Q99758 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.48□□□□□ -2.17
ABCA3Q99758 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
ABCA3Q99758 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.47□□□□□ -2.17
ABCA3Q99758 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
ABCA3Q99758 CISD1P1-201ENST00000393907 327 ntBASIC1.47□□□□□ -2.17
ABCA3Q99758 MTCO3P4-201ENST00000419236 787 ntBASIC1.47□□□□□ -2.17
ABCA3Q99758 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.47□□□□□ -2.17
ABCA3Q99758 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.47□□□□□ -2.17
ABCA3Q99758 AGGF1P5-201ENST00000567900 919 ntBASIC1.47□□□□□ -2.17
ABCA3Q99758 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.47□□□□□ -2.17
ABCA3Q99758 UCA1.1-201ENST00000620952 75 ntBASIC1.47□□□□□ -2.17
ABCA3Q99758 AP003072.5-201ENST00000623872 773 ntBASIC1.47□□□□□ -2.17
ABCA3Q99758 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.47□□□□□ -2.17
ABCA3Q99758 AL137003.2-201ENST00000606924 2538 ntBASIC1.47□□□□□ -2.17
ABCA3Q99758 MTND4P27-201ENST00000450813 1354 ntBASIC1.47□□□□□ -2.17
ABCA3Q99758 AC010889.1-201ENST00000566193 2666 ntBASIC1.47□□□□□ -2.17
ABCA3Q99758 Y_RNA.62-201ENST00000362840 99 ntBASIC1.46□□□□□ -2.18
ABCA3Q99758 AL596276.1-201ENST00000434465 418 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms