Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.5□□□□□ -2.01
NPAS2Q99743 RPS15AP34-201ENST00000487776 387 ntBASIC2.5□□□□□ -2.01
NPAS2Q99743 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.5□□□□□ -2.01
NPAS2Q99743 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.5□□□□□ -2.01
NPAS2Q99743 RNU4-29P-201ENST00000515943 174 ntBASIC2.5□□□□□ -2.01
NPAS2Q99743 RNU6-927P-201ENST00000516199 100 ntBASIC2.5□□□□□ -2.01
NPAS2Q99743 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
NPAS2Q99743 MIR3124-201ENST00000582636 67 ntBASIC2.5□□□□□ -2.01
NPAS2Q99743 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.5□□□□□ -2.01
NPAS2Q99743 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.5□□□□□ -2.01
NPAS2Q99743 AC135507.1-201ENST00000607214 561 ntBASIC2.5□□□□□ -2.01
NPAS2Q99743 AC107294.1-201ENST00000609524 467 ntBASIC2.5□□□□□ -2.01
NPAS2Q99743 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.5□□□□□ -2.01
NPAS2Q99743 AP000676.3-201ENST00000623299 569 ntBASIC2.5□□□□□ -2.01
NPAS2Q99743 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.5□□□□□ -2.01
NPAS2Q99743 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
NPAS2Q99743 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
NPAS2Q99743 AP000776.1-201ENST00000530032 1663 ntBASIC2.5□□□□□ -2.01
NPAS2Q99743 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
NPAS2Q99743 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
NPAS2Q99743 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
NPAS2Q99743 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
NPAS2Q99743 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
NPAS2Q99743 U3.12-201ENST00000364498 214 ntBASIC2.49□□□□□ -2.01
NPAS2Q99743 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
NPAS2Q99743 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.49□□□□□ -2.01
NPAS2Q99743 AL139095.1-201ENST00000404326 391 ntBASIC2.49□□□□□ -2.01
NPAS2Q99743 AC096649.2-201ENST00000416186 393 ntBASIC2.49□□□□□ -2.01
NPAS2Q99743 TXNL1P1-201ENST00000429528 554 ntBASIC2.49□□□□□ -2.01
NPAS2Q99743 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.49□□□□□ -2.01
NPAS2Q99743 Z80107.1-201ENST00000436830 412 ntBASIC2.49□□□□□ -2.01
NPAS2Q99743 RSU1P2-202ENST00000437884 485 ntBASIC2.49□□□□□ -2.01
NPAS2Q99743 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.49□□□□□ -2.01
NPAS2Q99743 AL445687.1-201ENST00000439946 251 ntBASIC2.49□□□□□ -2.01
NPAS2Q99743 AC020550.1-201ENST00000447385 163 ntBASIC2.49□□□□□ -2.01
NPAS2Q99743 AC126389.1-201ENST00000477436 290 ntBASIC2.49□□□□□ -2.01
NPAS2Q99743 RPL7P18-201ENST00000478965 734 ntBASIC2.49□□□□□ -2.01
NPAS2Q99743 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.49□□□□□ -2.01
NPAS2Q99743 AC020699.1-201ENST00000505161 445 ntBASIC2.49□□□□□ -2.01
NPAS2Q99743 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.49□□□□□ -2.01
NPAS2Q99743 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.49□□□□□ -2.01
NPAS2Q99743 MTND5P13-201ENST00000513046 1079 ntBASIC2.49□□□□□ -2.01
NPAS2Q99743 SNORA31.18-201ENST00000517043 134 ntBASIC2.49□□□□□ -2.01
NPAS2Q99743 RNA5SP290-201ENST00000517133 127 ntBASIC2.49□□□□□ -2.01
NPAS2Q99743 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.49□□□□□ -2.01
NPAS2Q99743 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
NPAS2Q99743 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.49□□□□□ -2.01
NPAS2Q99743 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.49□□□□□ -2.01
NPAS2Q99743 MTND4LP5-201ENST00000605152 292 ntBASIC2.49□□□□□ -2.01
NPAS2Q99743 AL592221.1-201ENST00000605266 382 ntBASIC2.49□□□□□ -2.01
NPAS2Q99743 RNU6-88P-201ENST00000606801 100 ntBASIC2.49□□□□□ -2.01
NPAS2Q99743 AC080013.3-201ENST00000606839 578 ntBASIC2.49□□□□□ -2.01
NPAS2Q99743 AC004908.2-201ENST00000609090 574 ntBASIC2.49□□□□□ -2.01
NPAS2Q99743 AL137847.3-201ENST00000611521 109 ntBASIC2.49□□□□□ -2.01
NPAS2Q99743 AC140725.3-201ENST00000616193 880 ntBASIC2.49□□□□□ -2.01
NPAS2Q99743 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.49□□□□□ -2.01
NPAS2Q99743 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.49□□□□□ -2.01
NPAS2Q99743 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
NPAS2Q99743 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
NPAS2Q99743 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.49□□□□□ -2.01
NPAS2Q99743 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
NPAS2Q99743 RNU1-100P-201ENST00000365255 165 ntBASIC2.48□□□□□ -2.01
NPAS2Q99743 MIR513B-201ENST00000385136 84 ntBASIC2.48□□□□□ -2.01
NPAS2Q99743 TAS2R15P-201ENST00000390674 928 ntBASIC2.48□□□□□ -2.01
NPAS2Q99743 RNU6-750P-201ENST00000390946 107 ntBASIC2.48□□□□□ -2.01
NPAS2Q99743 AC023141.4-201ENST00000412031 328 ntBASIC2.48□□□□□ -2.01
NPAS2Q99743 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.48□□□□□ -2.01
NPAS2Q99743 HMGB1P9-201ENST00000429856 646 ntBASIC2.48□□□□□ -2.01
NPAS2Q99743 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.48□□□□□ -2.01
NPAS2Q99743 SNRPEP9-201ENST00000436794 238 ntBASIC2.48□□□□□ -2.01
NPAS2Q99743 AC011816.1-201ENST00000441346 546 ntBASIC2.48□□□□□ -2.01
NPAS2Q99743 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.48□□□□□ -2.01
NPAS2Q99743 DPPA3P1-201ENST00000448050 469 ntBASIC2.48□□□□□ -2.01
NPAS2Q99743 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.48□□□□□ -2.01
NPAS2Q99743 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.48□□□□□ -2.01
NPAS2Q99743 AIG1P1-201ENST00000503376 148 ntBASIC2.48□□□□□ -2.01
NPAS2Q99743 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.48□□□□□ -2.01
NPAS2Q99743 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
NPAS2Q99743 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.48□□□□□ -2.01
NPAS2Q99743 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
NPAS2Q99743 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.48□□□□□ -2.01
NPAS2Q99743 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.48□□□□□ -2.01
NPAS2Q99743 AL133153.1-201ENST00000557756 303 ntBASIC2.48□□□□□ -2.01
NPAS2Q99743 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.48□□□□□ -2.01
NPAS2Q99743 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.48□□□□□ -2.01
NPAS2Q99743 MIR3117-201ENST00000584034 78 ntBASIC2.48□□□□□ -2.01
NPAS2Q99743 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.48□□□□□ -2.01
NPAS2Q99743 AC116312.1-201ENST00000606841 314 ntBASIC2.48□□□□□ -2.01
NPAS2Q99743 AC092106.3-201ENST00000611308 722 ntBASIC2.48□□□□□ -2.01
NPAS2Q99743 MIR7515-201ENST00000637837 67 ntBASIC2.48□□□□□ -2.01
NPAS2Q99743 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
NPAS2Q99743 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
NPAS2Q99743 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
NPAS2Q99743 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.47□□□□□ -2.01
NPAS2Q99743 U8.8-201ENST00000365399 135 ntBASIC2.47□□□□□ -2.01
NPAS2Q99743 MIR196B-201ENST00000384852 84 ntBASIC2.47□□□□□ -2.01
NPAS2Q99743 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
NPAS2Q99743 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
NPAS2Q99743 NDUFS5P4-201ENST00000412983 318 ntBASIC2.47□□□□□ -2.01
NPAS2Q99743 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms