Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.18□□□□□ -1.9
RAD9AQ99638 KCTD9P5-201ENST00000504141 1170 ntBASIC3.18□□□□□ -1.9
RAD9AQ99638 FAM60DP-201ENST00000524174 632 ntBASIC3.18□□□□□ -1.9
RAD9AQ99638 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
RAD9AQ99638 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.18□□□□□ -1.9
RAD9AQ99638 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.18□□□□□ -1.9
RAD9AQ99638 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.18□□□□□ -1.9
RAD9AQ99638 OR4H12P-201ENST00000556269 907 ntBASIC3.18□□□□□ -1.9
RAD9AQ99638 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.18□□□□□ -1.9
RAD9AQ99638 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.18□□□□□ -1.9
RAD9AQ99638 RSL24D1P11-201ENST00000591045 491 ntBASIC3.18□□□□□ -1.9
RAD9AQ99638 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.18□□□□□ -1.9
RAD9AQ99638 AC121334.2-201ENST00000605387 271 ntBASIC3.18□□□□□ -1.9
RAD9AQ99638 AC007619.2-201ENST00000605743 379 ntBASIC3.18□□□□□ -1.9
RAD9AQ99638 AC087752.4-201ENST00000605911 462 ntBASIC3.18□□□□□ -1.9
RAD9AQ99638 AL391813.2-201ENST00000609113 322 ntBASIC3.18□□□□□ -1.9
RAD9AQ99638 AC107294.3-201ENST00000609211 526 ntBASIC3.18□□□□□ -1.9
RAD9AQ99638 AC108747.1-201ENST00000609508 535 ntBASIC3.18□□□□□ -1.9
RAD9AQ99638 TUG1_2.1-201ENST00000614234 87 ntBASIC3.18□□□□□ -1.9
RAD9AQ99638 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.18□□□□□ -1.9
RAD9AQ99638 AC090582.1-201ENST00000636321 199 ntBASIC3.18□□□□□ -1.9
RAD9AQ99638 AC090740.1-201ENST00000623193 2262 ntBASIC3.18□□□□□ -1.9
RAD9AQ99638 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.17□□□□□ -1.9
RAD9AQ99638 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RAD9AQ99638 AC073325.2-201ENST00000339545 159 ntBASIC3.17□□□□□ -1.9
RAD9AQ99638 U3.11-201ENST00000364476 212 ntBASIC3.17□□□□□ -1.9
RAD9AQ99638 SNORA23-201ENST00000365128 182 ntBASIC3.17□□□□□ -1.9
RAD9AQ99638 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.17□□□□□ -1.9
RAD9AQ99638 SNORA36C-201ENST00000384289 132 ntBASIC3.17□□□□□ -1.9
RAD9AQ99638 MIR196B-201ENST00000384852 84 ntBASIC3.17□□□□□ -1.9
RAD9AQ99638 SNORA40.3-201ENST00000390964 122 ntBASIC3.17□□□□□ -1.9
RAD9AQ99638 RPS4XP3-201ENST00000398541 413 ntBASIC3.17□□□□□ -1.9
RAD9AQ99638 AC016907.1-201ENST00000419483 435 ntBASIC3.17□□□□□ -1.9
RAD9AQ99638 AC018630.2-202ENST00000422992 927 ntBASIC3.17□□□□□ -1.9
RAD9AQ99638 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.17□□□□□ -1.9
RAD9AQ99638 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.17□□□□□ -1.9
RAD9AQ99638 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.17□□□□□ -1.9
RAD9AQ99638 AL121890.1-201ENST00000435457 205 ntBASIC3.17□□□□□ -1.9
RAD9AQ99638 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.17□□□□□ -1.9
RAD9AQ99638 MTCO1P19-201ENST00000443487 500 ntBASIC3.17□□□□□ -1.9
RAD9AQ99638 USP9YP29-201ENST00000445112 563 ntBASIC3.17□□□□□ -1.9
RAD9AQ99638 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.17□□□□□ -1.9
RAD9AQ99638 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.17□□□□□ -1.9
RAD9AQ99638 SNORD109B-201ENST00000458961 67 ntBASIC3.17□□□□□ -1.9
RAD9AQ99638 SNORD109A-201ENST00000459128 67 ntBASIC3.17□□□□□ -1.9
RAD9AQ99638 TRBV12-1-201ENST00000479785 344 ntBASIC3.17□□□□□ -1.9
RAD9AQ99638 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RAD9AQ99638 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.17□□□□□ -1.9
RAD9AQ99638 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.17□□□□□ -1.9
RAD9AQ99638 MTND4P2-201ENST00000507767 1203 ntBASIC3.17□□□□□ -1.9
RAD9AQ99638 RNA5SP380-201ENST00000517190 98 ntBASIC3.17□□□□□ -1.9
RAD9AQ99638 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.17□□□□□ -1.9
RAD9AQ99638 OR5G4P-201ENST00000525251 760 ntBASIC3.17□□□□□ -1.9
RAD9AQ99638 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.17□□□□□ -1.9
RAD9AQ99638 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.17□□□□□ -1.9
RAD9AQ99638 AC006362.1-201ENST00000567392 174 ntBASIC3.17□□□□□ -1.9
RAD9AQ99638 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.17□□□□□ -1.9
RAD9AQ99638 AC005771.1-201ENST00000585581 349 ntBASIC3.17□□□□□ -1.9
RAD9AQ99638 AC009977.1-201ENST00000586015 570 ntBASIC3.17□□□□□ -1.9
RAD9AQ99638 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.17□□□□□ -1.9
RAD9AQ99638 AC024153.1-201ENST00000603103 365 ntBASIC3.17□□□□□ -1.9
RAD9AQ99638 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
RAD9AQ99638 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RAD9AQ99638 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.17□□□□□ -1.9
RAD9AQ99638 AC108479.2-201ENST00000617314 601 ntBASIC3.17□□□□□ -1.9
RAD9AQ99638 AC099654.13-201ENST00000639774 207 ntBASIC3.17□□□□□ -1.9
RAD9AQ99638 MAPK10-322ENST00000641485 4530 ntBASIC3.17□□□□□ -1.9
RAD9AQ99638 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.17□□□□□ -1.9
RAD9AQ99638 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RAD9AQ99638 AC008568.2-201ENST00000623862 2313 ntBASIC3.16□□□□□ -1.9
RAD9AQ99638 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RAD9AQ99638 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
RAD9AQ99638 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.16□□□□□ -1.9
RAD9AQ99638 RNU5A-8P-201ENST00000364102 114 ntBASIC3.16□□□□□ -1.9
RAD9AQ99638 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
RAD9AQ99638 RNU6-278P-201ENST00000390945 109 ntBASIC3.16□□□□□ -1.9
RAD9AQ99638 U3.42-201ENST00000408746 214 ntBASIC3.16□□□□□ -1.9
RAD9AQ99638 BTF3L4P1-201ENST00000413813 468 ntBASIC3.16□□□□□ -1.9
RAD9AQ99638 UBE2FP1-201ENST00000416536 447 ntBASIC3.16□□□□□ -1.9
RAD9AQ99638 MTCO2P34-201ENST00000421994 607 ntBASIC3.16□□□□□ -1.9
RAD9AQ99638 AC008850.1-201ENST00000427546 362 ntBASIC3.16□□□□□ -1.9
RAD9AQ99638 AL356867.1-201ENST00000429623 299 ntBASIC3.16□□□□□ -1.9
RAD9AQ99638 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.16□□□□□ -1.9
RAD9AQ99638 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
RAD9AQ99638 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.16□□□□□ -1.9
RAD9AQ99638 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.16□□□□□ -1.9
RAD9AQ99638 SSXP1-201ENST00000453640 473 ntBASIC3.16□□□□□ -1.9
RAD9AQ99638 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.16□□□□□ -1.9
RAD9AQ99638 AC108059.3-201ENST00000456388 214 ntBASIC3.16□□□□□ -1.9
RAD9AQ99638 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.16□□□□□ -1.9
RAD9AQ99638 RPS26P21-201ENST00000475397 348 ntBASIC3.16□□□□□ -1.9
RAD9AQ99638 RPS15AP36-201ENST00000492022 382 ntBASIC3.16□□□□□ -1.9
RAD9AQ99638 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.16□□□□□ -1.9
RAD9AQ99638 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
RAD9AQ99638 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.16□□□□□ -1.9
RAD9AQ99638 AP003467.2-201ENST00000520175 319 ntBASIC3.16□□□□□ -1.9
RAD9AQ99638 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.16□□□□□ -1.9
RAD9AQ99638 AP003122.4-201ENST00000530980 758 ntBASIC3.16□□□□□ -1.9
RAD9AQ99638 AP002453.2-201ENST00000533503 320 ntBASIC3.16□□□□□ -1.9
RAD9AQ99638 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms