Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 RNU6-699P-201ENST00000517081 110 ntBASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 Y_RNA.721-201ENST00000517207 102 ntBASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 SOD1P3-201ENST00000518682 454 ntBASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 AC135001.1-201ENST00000544546 283 ntBASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 AC093227.2-201ENST00000589357 285 ntBASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 AC092747.3-201ENST00000603769 301 ntBASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 AC016727.2-201ENST00000603988 621 ntBASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 AC245517.5-201ENST00000611529 162 ntBASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 AC064801.1-201ENST00000612025 407 ntBASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 AC008785.1-201ENST00000624475 456 ntBASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 SNORD113-7-201ENST00000363762 77 ntBASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 RNA5SP515-201ENST00000364570 118 ntBASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 RNU6-99P-201ENST00000364721 107 ntBASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 RNA5SP479-201ENST00000364858 117 ntBASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 MIR19A-201ENST00000384878 82 ntBASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 MIR513A2-201ENST00000385249 127 ntBASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 AL023807.1-201ENST00000407932 359 ntBASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 MIR1251-201ENST00000408552 70 ntBASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 RN7SKP177-201ENST00000410567 355 ntBASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 AC114491.1-201ENST00000416095 246 ntBASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 AL691449.1-201ENST00000426570 421 ntBASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 AC093106.2-201ENST00000428212 385 ntBASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 AL358472.1-201ENST00000431295 329 ntBASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 RPL23AP74-201ENST00000437246 471 ntBASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 HMGB1P15-201ENST00000453854 435 ntBASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 SNRPFP3-201ENST00000457792 225 ntBASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 FTH1P2-201ENST00000466086 412 ntBASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 AC008571.1-201ENST00000467232 300 ntBASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 AP000893.1-201ENST00000474462 794 ntBASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 RPL23AP11-201ENST00000475260 469 ntBASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 IGLVIV-53-201ENST00000520107 367 ntBASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 MTND4P7-201ENST00000523876 130 ntBASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 AC023442.1-201ENST00000531247 422 ntBASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 AC012603.1-201ENST00000606424 528 ntBASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 AC062037.2-201ENST00000610137 73 ntBASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 AC011890.2-201ENST00000613393 294 ntBASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 AC098657.3-201ENST00000620434 263 ntBASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CDK5RAP1Q96SZ6 ZNF519P1-201ENST00000449011 1626 ntBASIC4.22□□□□□ -1.73
CDK5RAP1Q96SZ6 MIR372-201ENST00000362225 67 ntBASIC4.22□□□□□ -1.73
CDK5RAP1Q96SZ6 RNU6-188P-201ENST00000364207 107 ntBASIC4.22□□□□□ -1.73
CDK5RAP1Q96SZ6 RNA5SP283-201ENST00000365604 119 ntBASIC4.22□□□□□ -1.73
CDK5RAP1Q96SZ6 SNORD116-11-201ENST00000383882 92 ntBASIC4.22□□□□□ -1.73
CDK5RAP1Q96SZ6 Y_RNA.447-201ENST00000384184 113 ntBASIC4.22□□□□□ -1.73
CDK5RAP1Q96SZ6 RNU2-29P-201ENST00000410423 189 ntBASIC4.22□□□□□ -1.73
CDK5RAP1Q96SZ6 RPS12P23-201ENST00000419579 400 ntBASIC4.22□□□□□ -1.73
CDK5RAP1Q96SZ6 AL139396.1-201ENST00000421137 167 ntBASIC4.22□□□□□ -1.73
CDK5RAP1Q96SZ6 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.22□□□□□ -1.73
CDK5RAP1Q96SZ6 PSMA6P3-201ENST00000428242 164 ntBASIC4.22□□□□□ -1.73
CDK5RAP1Q96SZ6 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.22□□□□□ -1.73
CDK5RAP1Q96SZ6 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.22□□□□□ -1.73
CDK5RAP1Q96SZ6 PLGLA-201ENST00000465668 449 ntBASIC4.22□□□□□ -1.73
CDK5RAP1Q96SZ6 RPL23AP41-201ENST00000484754 458 ntBASIC4.22□□□□□ -1.73
CDK5RAP1Q96SZ6 AC097473.1-201ENST00000508142 408 ntBASIC4.22□□□□□ -1.73
CDK5RAP1Q96SZ6 MRPS35P2-201ENST00000508242 191 ntBASIC4.22□□□□□ -1.73
CDK5RAP1Q96SZ6 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
CDK5RAP1Q96SZ6 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.22□□□□□ -1.73
CDK5RAP1Q96SZ6 FTH1P21-201ENST00000512179 511 ntBASIC4.22□□□□□ -1.73
CDK5RAP1Q96SZ6 TBCAP3-201ENST00000512475 312 ntBASIC4.22□□□□□ -1.73
CDK5RAP1Q96SZ6 IFITM8P-201ENST00000522529 394 ntBASIC4.22□□□□□ -1.73
CDK5RAP1Q96SZ6 AC053481.4-201ENST00000583164 216 ntBASIC4.22□□□□□ -1.73
CDK5RAP1Q96SZ6 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.22□□□□□ -1.73
CDK5RAP1Q96SZ6 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.22□□□□□ -1.73
CDK5RAP1Q96SZ6 AC023043.2-201ENST00000589678 1026 ntBASIC4.22□□□□□ -1.73
CDK5RAP1Q96SZ6 MIR6868-201ENST00000611215 58 ntBASIC4.22□□□□□ -1.73
CDK5RAP1Q96SZ6 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.22□□□□□ -1.73
CDK5RAP1Q96SZ6 AL136313.1-201ENST00000624804 202 ntBASIC4.22□□□□□ -1.73
CDK5RAP1Q96SZ6 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.22□□□□□ -1.73
CDK5RAP1Q96SZ6 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.22□□□□□ -1.73
CDK5RAP1Q96SZ6 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms